KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:53 2014 Check: 00 .. Name: ENSP00000356251/1-481 Len: 533 Check: 7728 Weight: 1.00 Name: ENSBTAP00000019957/1-482 Len: 533 Check: 6664 Weight: 1.00 Name: ENSTTRP00000010637/1-462 Len: 533 Check: 6071 Weight: 1.00 Name: bmy_09429T0/1-526 Len: 533 Check: 7418 Weight: 1.00 Name: BACU009793/1-479 Len: 533 Check: 6183 Weight: 1.00 // 1 50 ENSP00000356251/1-481 ---------- ---------- ---------- ---------- -------MRW ENSBTAP00000019957/1-482 ---------- ---------- ---------- ---------- -------MRW ENSTTRP00000010637/1-462 ---------- ---------- ---------- ---------- -------MRW bmy_09429T0/1-526 MEGGAGAGWQ CQTPDGGGPT GQLPVESAPH SVRPRLRSWA ATAAHPAMRW BACU009793/1-479 ---------- ---------- ---------- ---------- -------MRW 51 100 ENSP00000356251/1-481 LWPLAVSLAV ILAVGLSRVS GGAPLHLGRH RAETQEQQSR SKRGTEDE-E ENSBTAP00000019957/1-482 LWPLGVSLAV ALAAGPERAP RGVWLQQGGH QPVAQEQPDR SRRGAERE-D ENSTTRP00000010637/1-462 PWPLAICLAV ALAAGPGRVP GGVPLRRGG- ---------- --RGTEEE-- bmy_09429T0/1-526 PWPLAISLAV ALAAGPGRVP GGVPLRRGGR QAATQEQPSR SRRGTEEEEE BACU009793/1-479 PWPLAISLAV ALAAGPGRAP WGVPLRRGGR QAATQEQPSR SRRGTEEEEE 101 150 ENSP00000356251/1-481 AKGVQQYVPE EWAEYPRPIH PAGLQPTKPL VATSPNPGKD GGTPDSGQEL ENSBTAP00000019957/1-482 AKGLQQYVPE GWAEYPRPIR PAALQPTQPW VAASPSPDRA RATGGSGQEP ENSTTRP00000010637/1-462 AKGVQQYVPQ EWAEYPRPIR PTGPQPTEPQ VAASAHPDRA VVPGGSRQEP bmy_09429T0/1-526 AKGVQQYAPE EWAEYPRPIR PTGPQPTEPQ VAASAPPDWA VVPGGSRQEP BACU009793/1-479 AKGVQQYAPE EWAEYPRPIR PTGPQPTEPQ VAASAHPDWA VVPGGSRQEP 151 200 ENSP00000356251/1-481 RGNLTGAPGQ RLQIQNPLYP VTESSYSAYA IMLLALVVFA VGIVGNLSVM ENSBTAP00000019957/1-482 QGNVTGPPGQ RPQVQNPLYP VTERSYGAYA VLLLALLLFA VGIVGSLAVM ENSTTRP00000010637/1-462 RGNTTGTPGR RLQIQNPLYP VTESSYGAYA VLLLALALFA VGIVGNLAVM bmy_09429T0/1-526 RGNTTGTPGR RLQIQNPLYP VTESSYGAYT VLLLALLLFA VGIVGNLAVM BACU009793/1-479 RGNTTGTPGR RLQIQNPLYP VTESSYGAYT VLLLALVLFA VGIVGNLAVM 201 250 ENSP00000356251/1-481 CIVWHSYYLK SAWNSILASL ALWDFLVLFF CLPIVIFNEI TKQRLLGDVS ENSBTAP00000019957/1-482 CIVWHSYYLK SAWNSVLASL ALWDFLVLFF CLPVVTFHEI TKQRLLGAVS ENSTTRP00000010637/1-462 CIVWHSYYLK SAWNSILASL ALWDFLVLFF CLPVIIFHEI TKQRLLGDVS bmy_09429T0/1-526 CIVWHSYYLK SAWNSILASL ALWDFLVLFF CLPVIIFHEI TKQRLLGDVS BACU009793/1-479 CIVWHSYYLK SAWNSILASL ALWDFLVLFF CLPVIIFHEI TKQRLLGDVS 251 300 ENSP00000356251/1-481 CRAVPFMEVS SLGVTTFSLC ALGIDRFHVA TSTLPKVRPI ERCQSILAKL ENSBTAP00000019957/1-482 CRAVPFVEVS SLGVTTFSLC ALGIDRFHVA TSTLPKARPI EPCPSILAKL ENSTTRP00000010637/1-462 CRAVPFVEVS SLGVTTFSLC ALGIDRFHVA TSTLPEARPI EPCPSILAKL bmy_09429T0/1-526 CRAVPFVEVS SLGVTTFSLC ALGIDRFHVA TSTLPKARPI EPCPSILAKL BACU009793/1-479 CRAVPFVEVS ALGITTFSLC ALGIDRFHVA TSTLPKARPI EPCPSILAKL 301 350 ENSP00000356251/1-481 AVIWVGSMTL AVPELLLWQL AQEPAPTMGT LDSCIMKPSA SLPESLYSLV ENSBTAP00000019957/1-482 AVIWVGSMTL AAPELLLWQL VREPSPAAGT VDTCIMKPSA HLPESLYSLV ENSTTRP00000010637/1-462 AVIWVGSMTL AAPELLLWQL VQEPGPAAGP VDACVMKPSA RLPESLYSLV bmy_09429T0/1-526 AVIWVGSMTL AVPELLLWQL VQEPGPAAGP VDACVMKPSA RLPESLYSLV BACU009793/1-479 AVIWVGSMTL AVPELLLWQL VQEPGPAAGP VDACVMKPSA RLPESLYSLV 351 400 ENSP00000356251/1-481 MTYQNARMWW YFGCYFCLPI LFTVTCQLVT WRVRGPPGRK SECRASKHEQ ENSBTAP00000019957/1-482 LTYQNARMWW SFGCYFCLPV LFTVTCQLVT WRVRGTPGRK PESRPGPQEP ENSTTRP00000010637/1-462 LTYQNARMWW SFGCYFCLPV LFTVTCQLVT WRVWGPPGRK PECRPGQQER bmy_09429T0/1-526 LTYQNARMWW SFGCYFCLPV LFTVTCQLVT WRVWGPPGRK PECRPGQQEQ BACU009793/1-479 LTYQNARMWW SFGCYFCLPV LFTVTCQLVT WRVWGPPGRK PECRQGQQEQ 401 450 ENSP00000356251/1-481 CESQLNSTVV GLTVVYAFCT LPENVCNIVV AYLSTELTRQ TLDLLGLINQ ENSBTAP00000019957/1-482 RGARPSSTVA GLAAVHALCA LPENVCNVVA AYLSAALTRQ TLELLGLVTQ ENSTTRP00000010637/1-462 REGQLSGTVV GLTAVYTLCT LPENVCNVVA AYLSATLTRQ THDLLGLXXX bmy_09429T0/1-526 REGQLSSTVV GLTAVYALCT LPENVCNVVA AYLSATLTRQ TLDLLGLVGQ BACU009793/1-479 REGQLSSTVV GLTAVYALCT LPENVCNVVA AYLSATLTRQ TLDLLGLVGQ 451 500 ENSP00000356251/1-481 FSTFFKGAIT PVLLLCICRP LGQAFLDCCC CCC---C-EE CGGASEASAA ENSBTAP00000019957/1-482 FSTFFKAALT PLLLLCVSRP LGRAFLDCCC CCCGEGCGEG CGG---RAAP ENSTTRP00000010637/1-462 XXXXXXXXXX XXXXXXXXXX XXXXFLDCCC CCC---C-E- CGG---VAAT bmy_09429T0/1-526 FSAFVKAAVT PVLLLCVCRP LGRAFLDCCC CCC---C-EG CGG---AAAT BACU009793/1-479 FSTFLKAAVT PVLLLCVCRP LGRAFLDCCC CSC---W-EG CGG---AAAT 501 550 ENSP00000356251/1-481 NGSDNKLKTE VSSSIYFHKP RESPPLLPLG TPC ENSBTAP00000019957/1-482 AGPRAKLHTE LSASGYFHKP REAPPLLALG TPC ENSTTRP00000010637/1-462 TA-DAKLQTG LSTSVYFHKP REAPPLLALG TPC bmy_09429T0/1-526 DGPDAKLQTG LSASVYFHKP REAPPLLALG TSC BACU009793/1-479 DGPDAKLQTG LSASVYFHKP REAPPLLALG TPC