KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:56 2014 Check: 00 .. Name: BACU003511/1-191 Len: 199 Check: 5959 Weight: 1.00 Name: bmy_07800T0/1-123 Len: 199 Check: 2099 Weight: 1.00 Name: ENSP00000308897/1-192 Len: 199 Check: 2262 Weight: 1.00 Name: ENSTTRP00000002511/1-192 Len: 199 Check: 1847 Weight: 1.00 Name: ENSBTAP00000019979/1-192 Len: 199 Check: 1299 Weight: 1.00 // 1 50 BACU003511/1-191 MSKLSRATRA LRKPEAGGVI RTIVRAGQAM PGPPLGPVLG QRGVSINQFC bmy_07800T0/1-123 MSKLSRATRA LRKPEAGGVI RTIVRAGQAM PGPPLGPVLG QRGVSINQFC ENSP00000308897/1-192 MSKLGRAARG LRKPEVGGVI RAIVRAGLAM PGPPLGPVLG QRGVSINQFC ENSTTRP00000002511/1-192 MSKLSRATRA LRKPEAGGVI RTIVRAGQAM PGPPLGPVLG QRGVSINQFC ENSBTAP00000019979/1-192 MSKLSRATRA LRKPEAEGVI RTILRAGQAM PGPPLGPILG QRGVSINQFC 51 100 BACU003511/1-191 KEFNEKTKDI KEGIPLPTKI FVKPDRTFEI KIGQPTVSYF LKAAAGIEKG bmy_07800T0/1-123 KEFNEKTKDI KEGIPLPTKI FVKPDRTFEI KIGQPTVSYF LKAAAGIEKG ENSP00000308897/1-192 KEFNERTKDI KEGIPLPTKI LVKPDRTFEI KIGQPTVSYF LKAAAGIEKG ENSTTRP00000002511/1-192 KEFNEKTKDI KEGIPLPTKI FVKPDRTFEI KIGQPTVSYF LKAAAGIEKG ENSBTAP00000019979/1-192 KEFNEKTKDI KEGIPLPTKI FVKPDRTFEI KIGQPTVSYF LKAAAGIEKG 101 150 BACU003511/1-191 ARNTA----- --SVQKSWQL SR-RSEPCSW LLRKRQIWQP RQKLPRSDPC bmy_07800T0/1-123 ARHTGKGQGG ---------- -----HPGFW ALE------- -----GSSDT ENSP00000308897/1-192 ARQTGKEVAG LVTLKHVYEI ARIKAQDEAF ALQDVPLSSV VRSIIGSARS ENSTTRP00000002511/1-192 ARHTGKEVAG LVTLKHVYEI ARVKAQDDAF ALQDVPLSSV VRSIIGSARS ENSBTAP00000019979/1-192 ARNTGKEVAG LVTLKHVYEI ARVKAQDDAF ALQDVPLSSV VRSIIGSARS 151 200 BACU003511/1-191 PPPSRILKGA SWEGWARGEE GRSHQPDYIF LTLNYVFLHV WLYQRIKRE bmy_07800T0/1-123 ---------- ---------- ---------- ---------- --------- ENSP00000308897/1-192 -LGIRVVKDL SSEELAAFQK ERA-----IF LAAQKEADLA AQEEAAKK- ENSTTRP00000002511/1-192 -LGIRVVKDL SSEELAAFQK ERA-----LF LAAQREADLA AQAEAAKK- ENSBTAP00000019979/1-192 -LGIRVVKDL SSEELAAFQK ERA-----LF LAAQKEADLA AQAEAAKK-