KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:09:56 2014 Check: 00 .. Name: ENSP00000296046/1-417 Len: 468 Check: 5668 Weight: 1.00 Name: ENSBTAP00000019982/1-417 Len: 468 Check: 9678 Weight: 1.00 Name: bmy_17321T0/1-327 Len: 468 Check: 8039 Weight: 1.00 Name: ENSTTRP00000003333/1-413 Len: 468 Check: 1618 Weight: 1.00 // 1 50 ENSP00000296046/1-417 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019982/1-417 ---------- ---------- ---------- ---------- ---------- bmy_17321T0/1-327 MKAFANPSTS LPAGLQQGNP LGGPVTLHIY QVERNEAIAA IHRGLGQAKK ENSTTRP00000003333/1-413 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000296046/1-417 MRLILPV-GL IATTLAIAPV RFDREKVFRV KPQDEKQADI IKDLAKTNEL ENSBTAP00000019982/1-417 MRFLLPV-GL IATTLAIAPV RFDGDKVLRV KLQDEKQANI IKDLAKTSQL bmy_17321T0/1-327 NREVHPASGL IAITLAIAPV RFDREKVLRV KPQDEKQANI IKGLAKTNQ- ENSTTRP00000003333/1-413 MRFILPL--L TAITLAIAPV RFDREKVLHV KP-DEKQANI IKDLAKTNQL 101 150 ENSP00000296046/1-417 DFWYPGATHH VAANMMVDFR VSEKESQAIQ SALDQNKMHY EILIHDLQEE ENSBTAP00000019982/1-417 DFWYPDATHH VAANMTVDFQ ISAKESQFVQ SALDQNQMHY EILIHDVQEE bmy_17321T0/1-327 ---------- ---------- ----EFQSIQ AALDQNKMHY EILIHDVQEE ENSTTRP00000003333/1-413 DFWHPDITHH VAANMTVDFR ISEKEFQSIQ AAFDQNRMHY EILIHDVQEE 151 200 ENSP00000296046/1-417 IEKQFDVKED IPGRHSYAKY NNWEKIVAWT EKMMDKYPEM VSRIKIGSTV ENSBTAP00000019982/1-417 VEKQFDVKED NPGRHSYAKY NNWNKIVAWT EKMVHKHPKM VSRIKIGTTV bmy_17321T0/1-327 VEKQFDVKED IPGRHSYAKY NNWD------ ---------- ---------- ENSTTRP00000003333/1-413 VEKQFDVKED IPGRHSYAKY NNWDEIVA-T EKMVHKHPKM VSRIKIGTTV 201 250 ENSP00000296046/1-417 EDNPLYVLKI GEKNERRKAI FTDCGIHARE WVSPAFCQWF VYQATKTYGR ENSBTAP00000019982/1-417 EDNPLYVLKI AGKDKRRKAI FMDCGIHARE WISPAFCQWF VYQATKTYGK bmy_17321T0/1-327 --------KI GEKDERRKAI FMDCGIHARE WISPAFCQWL VYQATKTYGK ENSTTRP00000003333/1-413 EDNPLYVLKI GEKDERRKAI FMDCGIHARE WISPAFCQWF VYRATKTYGK 251 300 ENSP00000296046/1-417 NKIMTKLLDR MNFYILPVFN VDGYIWSWTK NRMWRKNRSK NQNSKCIGTD ENSBTAP00000019982/1-417 NKIMTKLLDR MNFYVLPVFN VDGYIWSWTQ NRMWRKNRSR NQNSKCIGTD bmy_17321T0/1-327 NKIMTKLLDR MNFYVLPVFN VDGYIWSWRQ DRMWRKNRSK SQRSKCIGTD ENSTTRP00000003333/1-413 NKIMTKLLDR MNFYVLPVFN VDGYIWSWRQ DRMWRKNRSK NQRSKCIGTD 301 350 ENSP00000296046/1-417 LNRNFNASWN SIPNTNDPCA DNYRGSAPES EKETKAVTNF IRSHLNEIKV ENSBTAP00000019982/1-417 LNRNFNVSWN SFPNTNDPCQ EIYRGPAPES EKETKAVSDF IRSHLKSIKA bmy_17321T0/1-327 LNRNFNVSWN SFPHTKDPCW EIYRGPAPES EKETKAVTDF IRSHRKSIKA ENSTTRP00000003333/1-413 LNRNFNVSWN SFPHTKDPRR EIYGGPAPES EKETKAVTDF IGSHRKSIKA 351 400 ENSP00000296046/1-417 YITFHSYSQM LLFPYGYTSK LPPNHEDLAK VAKIGTDVLS TRYETRYIYG ENSBTAP00000019982/1-417 YITFHSYSQM LLFPYGYTSE LPPNHKNLAK VAKIATDVLS TPYETHYTYG bmy_17321T0/1-327 YLTFHSYSQM LLLPYXYTSE LPPNHEELTR HQ-------- ---------- ENSTTRP00000003333/1-413 YLTFHSYSQM LLFP-GYTSE LPPNHEELAK VAKIGTDVLS TQYEPLHTCG 401 450 ENSP00000296046/1-417 PIESTIYPIS GSSLDWAYDL GIKHTFAFEL RDKGKFGFLL PESRIKPTCR ENSBTAP00000019982/1-417 PIASTIYPTS GSSLDWAYNL GIKHTFAFEL RDKGRFGFLL PESQIKPTCK bmy_17321T0/1-327 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003333/1-413 PTASTIYPTS GSSLDWAYNL GIKHTFAFEL RDKGKFSFLL PESQIKSTCK 451 500 ENSP00000296046/1-417 ETMLAVKFIA KYILKHTS ENSBTAP00000019982/1-417 ETMLALKFIV KYILKHTS bmy_17321T0/1-327 ---------- -YLNK--- ENSTTRP00000003333/1-413 ETMLAVEFIV KYILKHTS