KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:58 2014 Check: 00 .. Name: ENSTTRP00000008354/1-579 Len: 580 Check: 3623 Weight: 1.00 Name: ENSP00000324741/1-580 Len: 580 Check: 9951 Weight: 1.00 Name: ENSBTAP00000019989/1-580 Len: 580 Check: 8886 Weight: 1.00 Name: BACU012089/1-571 Len: 580 Check: 844 Weight: 1.00 Name: bmy_16098T0/1-539 Len: 580 Check: 3832 Weight: 1.00 // 1 50 ENSTTRP00000008354/1-579 MESQCDYSMY FPAVPLPPRA ELAGDPGRYR ALPRRNHLYL GETVRFLLVL ENSP00000324741/1-580 MESQCDYSMY FPAVPLPPRA ELAGDPGRYR ALPRRNHLYL GETVRFLLVL ENSBTAP00000019989/1-580 MESQCDYSMY FPAVPLPPRA ELAGDPGRYR ALPRRNHLYL GETVRFLLVL BACU012089/1-571 MSS------- -PAVPLPPRA ELAGDPGRYR ALPRRNHLYL GETVRFLLVL bmy_16098T0/1-539 MESQCDYSMY FPAVPLPPRA ELAGDPGRYR ALPRRNHLYL GETVRFLLVL 51 100 ENSTTRP00000008354/1-579 RCRGGVGSGA GGGPGLGSRG AWAELATALA ALASVSA-GG APVGGGSGDQ ENSP00000324741/1-580 RCRGGAGSGT GGGPGLGSRG AWAELATALA ALASVSAGGG MPGGGGAGDQ ENSBTAP00000019989/1-580 RCRGGAGSGA GGGPGLGSRG AWAELATALA ALASVSAGGG APAGGGSGDQ BACU012089/1-571 RCRGGVGSGA GGGPGLGSRG AWAELATALA ALASVSA-GG APVGGGSGDQ bmy_16098T0/1-539 RCRGGVGSGA GGGPGLGSRG AWAELATALA ALASVSA-GG APVGGGSGDQ 101 150 ENSTTRP00000008354/1-579 DSEPPGGGDP GGGGLFRGCS PLLTHGPGPA TSGGATTLPV EEPIVSTDEV ENSP00000324741/1-580 DSEPPGGGDP GGGGLFRGCS PLLTHGPGPA TSGGATTLPV EEPIVSTDEV ENSBTAP00000019989/1-580 DPEPPGGGDP GGGGLFRGCS PLLTHGPGPA TSGGATTLPV EEPIVSTDEV BACU012089/1-571 DPEPPGGWDP GGGGLFRGCS PLLTHGPGPA TSGGATTLPV EEPIVSTDEV bmy_16098T0/1-539 DPEPPGGGDP GGGGLFRGCS PLLTHGPGPA TSGGATTLPV EEPIVSTDEV 151 200 ENSTTRP00000008354/1-579 IFPLTVSLDR LPPGTPKAKI VVTVWKREVE APEVRDQGYL RLLQTRSPGE ENSP00000324741/1-580 IFPLTVSLDR LPPGTPKAKI VVTVWKREIE APEVRDQGYL RLLQTRSPGE ENSBTAP00000019989/1-580 IFPLTVSLDR LPPGTPKAKI VVTVWKREVE APEVRDQGYL RLLQTRSPGE BACU012089/1-571 IFPLTVSLDR LPPGTPKAKI VVTVWKREVE APEVRDQGYL RLLQTRSPGE bmy_16098T0/1-539 IFPLTVSLDR LPPGTPKAKI VVTVWKREVE APEVRDQGYL RLLQTRSPGE 201 250 ENSTTRP00000008354/1-579 TFRGEQSAFK AQXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324741/1-580 TFRGEQSAFK AQVSTLLTLL PPPVLRCRQF TVAGKHLTVL KVLNSSSQEE ENSBTAP00000019989/1-580 TFRGEQSAFK AQVSTLLTLL PPPVLKCRQF TVAGKHLTVL KVLNSSSQEE BACU012089/1-571 TFRGEQSAFK AQVSTLLTLL PPPVLKCRQF TVAGKHLTVL KVLNGSSQEE bmy_16098T0/1-539 TFRGEQSAFK AQVSTLLTLL PPPVLKCRQF TVAGKHLTVL KVLNGSSQEE 251 300 ENSTTRP00000008354/1-579 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324741/1-580 ISIWDIRILP NFNASYLPVM PDGSVLLVDN VCHQSGEVSM GSFCRLPGTS ENSBTAP00000019989/1-580 ISVWDIRILP NFNASYLPVM PDGSVLLVDN VCHQSGEVSM GSFCRLPGTS BACU012089/1-571 ISIWDIRILP NFNASYLPVM PDGSVLLVDN VCHQSGEVSM GSFCQLPGTS bmy_16098T0/1-539 ISIWDIRILP NFNASYLPVM PDGSVLLVDN VC-------- ---------- 301 350 ENSTTRP00000008354/1-579 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324741/1-580 GCFPCPLNAL EEHNFLFQLR GGEQPPPGAK EGLEVPLIAV VQWSTPKLPF ENSBTAP00000019989/1-580 GCFPCPLSAL EEHNFLFQLR AGEQPPPGAK EGLEVPLIAV VQWSTPKLPF BACU012089/1-571 GCFPCLLSAL EEHNFLFQLR GGEQPPPGAK EGLEVPLIAV VQWSTPKLPF bmy_16098T0/1-539 --------AL EEHNFLFQLR GGEQPPPGAK EGLEVPLIAV VQWSTPKLPF 351 400 ENSTTRP00000008354/1-579 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324741/1-580 TQSIYTHYRL PSVRLDRPCF VMTASCKSPV RTYERFTVTY TLLNNLQDFL ENSBTAP00000019989/1-580 TQSIYTHYRL PSIRLDRPCF VMTASCESPV RTYERFTVTY TLLNNLQDFL BACU012089/1-571 TQSIYTHYRL PSIRLDRPCF VMTASCESPV RTYERFTVTY TLLNNLQDFL bmy_16098T0/1-539 TQSIYTHYRL PSIRLDRPCF VMTASCESPV RTYERFTVTY TLLNNLQDFL 401 450 ENSTTRP00000008354/1-579 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000324741/1-580 AVRLVWTPEH AQAGKQLCEE ERRAMQAALD SVVCHTPLNN LGFSRKGSAL ENSBTAP00000019989/1-580 AVRLVWTPEH AQAGKQLCEE ERRAMQAALD SIVCHTPLNN LGFSRKGSAL BACU012089/1-571 AVRLVWTPEH AQAGKQLCEE ERRAMQAALD SIVCYTPLNN LGFSRKGSAL bmy_16098T0/1-539 AVRLVWTPEH A--------- -----QAALD SIVCYTPLNN LGFSRKGSAL 451 500 ENSTTRP00000008354/1-579 XXXXXXXXXX XXXXXLSQHM KLKLQFTASV SHPPPEARPL SRKSSPSSPA ENSP00000324741/1-580 TFSVAFQALR TGLFELSQHM KLKLQFTASV SHPPPEARPL SRKSSPSSPA ENSBTAP00000019989/1-580 TFSVAFQALR TGLFELSQHM KLKLQFTASV SHPPPEARPL SRKSSPSSPA BACU012089/1-571 TFSVAFQALR TGLFELSQHM KLKLQFTASV SHPPPEARPL SRKSSPSSPA bmy_16098T0/1-539 TFSVAFQALR TGLFELSQHM KLKLQFTASV SHPPPEARPL SRKSSPSSPA 501 550 ENSTTRP00000008354/1-579 VRDLVERHQA SLGRSQSFSH QQPSRSHLMR SGSVMERRAI TPPVASPVSR ENSP00000324741/1-580 VRDLVERHQA SLGRSQSFSH QQPSRSHLMR SGSVMERRAI TPPVASPVGR ENSBTAP00000019989/1-580 VRDLVERHQA SLGRSQSFSH QQPSRSHLMR SGSVMERRAI TPPVASPVGR BACU012089/1-571 VRDLVERHQA SLGRSQSFSH QQPSRSHLMR SGSVMERRAI TPPVASPVGR bmy_16098T0/1-539 VRDLVERHQA SLGRSQSFSH QQPSRSHLMR SGSVMERRAI TPPVASPVGR 551 600 ENSTTRP00000008354/1-579 PLYLPPDKAV LSLDKIAKRE CKVLVVEPVK ENSP00000324741/1-580 PLYLPPDKAV LSLDKIAKRE CKVLVVEPVK ENSBTAP00000019989/1-580 PLYLPPDKAV LSLDKIAKRE CKVLVVEPVK BACU012089/1-571 PLYLPPDKAV LSLDKIAKRE CKVLVVEPVK bmy_16098T0/1-539 PLYLPPDKAV LSLDKIAKRE CKVLVVEPVK