KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:09:59 2014 Check: 00 .. Name: ENSTTRP00000014132/1-691 Len: 900 Check: 376 Weight: 1.00 Name: ENSBTAP00000019992/1-680 Len: 900 Check: 7560 Weight: 1.00 Name: ENSP00000449960/1-691 Len: 900 Check: 9016 Weight: 1.00 Name: bmy_04694T0/1-875 Len: 900 Check: 8253 Weight: 1.00 Name: BACU008082/1-717 Len: 900 Check: 4148 Weight: 1.00 // 1 50 ENSTTRP00000014132/1-691 MEESSLSRAP SRGGVNFLNV ARTYIPNTKV ECHYTLPPGT VPSASDWIGI ENSBTAP00000019992/1-680 MEESSLSRAP SRGGVNFLNV ARTYIPNTKV ECHYTLPPGT VPSASDWIGI ENSP00000449960/1-691 MEESPLSRAP SRGGVNFLNV ARTYIPNTKV ECHYTLPPGT MPSASDWIGI bmy_04694T0/1-875 MEESSLSRAP SRGGVNFLNV ARTYIPNTKV ECHYTLPPGT VPSASDWIGI BACU008082/1-717 MEESSLSRAP SRGGVNFLNV ARTYIPNTKV ECHYTLPPGT VPSASDWIGI 51 100 ENSTTRP00000014132/1-691 FKVEAACVRD YHTFVWSSVP ESVTDGSPIH ASVQFQASYL PKPGAQLYQF ENSBTAP00000019992/1-680 FKVEAACVRD YHTFVWSLVP ESVTDGSPIH ASVQFQASYL PKPGAQLYQF ENSP00000449960/1-691 FKVEAACVRD YHTFVWSSVP ESTTDGSPIH TSVQFQASYL PKPGAQLYQF bmy_04694T0/1-875 FKVEAACVRD YHTFVWSSVP ESATDGSPIH ASVQFQASYL PKPGAQLYQF BACU008082/1-717 FKVEAACVRD YHTFVWSSVP ESATDGSPIH ASVQFQASYL PKPGAQLYQF 101 150 ENSTTRP00000014132/1-691 RYVNRQGRVC GQSPPFQFRE PRPMDELVTL EETDGGSDIL LVVPKATVLQ ENSBTAP00000019992/1-680 RYVNRQGRVC GQSPPFQFRE PRPMDELVTL EETDGGSDIL LVVPKATVLQ ENSP00000449960/1-691 RYVNRQGQVC GQSPPFQFRE PRPMDELVTL EEADGGSDIL LVVPKATVLQ bmy_04694T0/1-875 RYVNRQGRVC GQSPPFQFRE PRPMDELVTL EETDGGSDIL LVVPKATVLQ BACU008082/1-717 RYVNRQGRVC GQSPPFQFRE PRPMDELVTL EETDGGSDIL LVVPKATVLQ 151 200 ENSTTRP00000014132/1-691 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXR VQELETALAS ARQEHVALEE ENSBTAP00000019992/1-680 NQLDESQQER NDLMQLKLQL EGQVTELKSQ VQELEKALAA ARQEHAELAE ENSP00000449960/1-691 NQLDESQQER NDLMQLKLQL EGQVTELRSR VQELERALAT ARQEHTELME bmy_04694T0/1-875 NQLDESQQEK NDLMQLKLQL EGQVTELRSR VQELEEALAT ARRERVELEE BACU008082/1-717 NQLDESQQER NDLMQLKLQL EGQVTELRSR VQELEKALAT ARREHVELEE 201 250 ENSTTRP00000014132/1-691 QYKGLSRSHG ELTEERDILS RQQGDHVARI LELEDDIQTI SEKVLTKEVE ENSBTAP00000019992/1-680 QYKGLSRSHG ELTEERDILS RQQGDHVARI LELEEDIQTI SEKVLMKEVE ENSP00000449960/1-691 QYKGISRSHG EITEERDILS RQQGDHVARI LELEDDIQTI SEKVLTKEVE bmy_04694T0/1-875 QYKGLSRSHG ELTEEKDILS RQQGDHVARI LELEDDIQTI SEKVLTKEVE BACU008082/1-717 QYKGLSRSHG ELTEERDILS RQQGDHVARI LELEDDIQTI SEKVLTKEVE 251 300 ENSTTRP00000014132/1-691 LDRVRDTVKA LTREQEKLLG QLKEVQADKE QSEXXXXXAQ QENCRLNLEL ENSBTAP00000019992/1-680 LDRVRDSVKA LTREQEKLLG QLKEVQADKE QSEAELQMAQ QENRRLNLEL ENSP00000449960/1-691 LDRLRDTVKA LTREQEKLLG QLKEVQADKE QSEAELQVAQ QENHHLNLDL bmy_04694T0/1-875 LDRVRDTVKA LTREQEKLLG QLKEVQADKE QSEAELQAAQ QENCRLNLEL BACU008082/1-717 LDRVRDTVKA LTREQEKLLG QLKEVQADKE QSEAELQAAQ QENCRLNLEL 301 350 ENSTTRP00000014132/1-691 QE-RGRQEEQ GAQSQRLKDK MAQMKDTLGQ AQQRVAELEP LKEQLRGAQE ENSBTAP00000019992/1-680 QEAKDRQEEQ SAQAQRLKDK VAQMKDTLGQ VQQRVAELEP LKEQLRGAQE ENSP00000449960/1-691 KEAKSWQEEQ SAQAQRLKDK VAQMKDTLGQ AQQRVAELEP LKEQLRGAQE bmy_04694T0/1-875 QEARGRQEEQ SAQAQRLKDR MAQMKGTLGQ AQQRVAELEP LKEQLRGAQE BACU008082/1-717 QEARGRQEEQ SAQAQRLKDR MAQMKGTLGQ AQQRVAELEP LKEQLRGAQE 351 400 ENSTTRP00000014132/1-691 LAASSQQKAA LLGEELASAA GARDRTIAEL HRSRLEVAGV NGRLAELSLH ENSBTAP00000019992/1-680 LAASSQQKAA LLGEELASAA GARDRTIAEL HRSRLEVAGV NGRLAELSLH ENSP00000449960/1-691 LAASSQQKAT LLGEELASAA AARDRTIAEL HRSRLEVAEV NGRLAELGLH bmy_04694T0/1-875 LAASSQQKAA LLGEELASAA GARDRTIAEL HRSRLEVAGV NGRLAELSLH BACU008082/1-717 LAASSQQKAA LLGEELASAA GARDRTIAEL HRSRLEVAGV NGRLAELSLH 401 450 ENSTTRP00000014132/1-691 LKEEKSQWSK ERAGLLQSVE AEKDKILKLS AEILRLEKAV QEEKTQNQVF ENSBTAP00000019992/1-680 LKEEKSQWSK ERAGLLQSVE AEKDKILKLS AEILRLEKAV QEEKTQSQVF ENSP00000449960/1-691 LKEEKCQWSK ERAGLLQSVE AEKDKILKLS AEILRLEKAV QEERTQNQVF bmy_04694T0/1-875 LKEEKSQWSK ERAGLLQSVE AEKDKILKLS AEILRLEKAV QEEKTQNQVF BACU008082/1-717 LKEEKSQWSK ERAGLLQSVE AEKDKILKLS AEILRLEKAV QEEKTQNQVF 451 500 ENSTTRP00000014132/1-691 KTELAQEKDS SLXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXELLEYM ENSBTAP00000019992/1-680 KTELAREKDS SLVQLSESKR ELTELRSALR VLQKEKEQLQ EEKQELLEYM ENSP00000449960/1-691 KTELAREKDS SLVQLSESKR ELTELRSALR VLQKEKEQLQ EEKQELLEYM bmy_04694T0/1-875 KTELAQEKDS SLVQLSESRR ELAELRSALR VLQKEKEQLQ EEKQELLEYM BACU008082/1-717 KTELAQEKDS SLVQLSESRR ELAELRSALR VLQKEKEQLQ EEKQELLEYM 501 550 ENSTTRP00000014132/1-691 RKLEARLEKV ADEKWNEDPA TEDEEAAAGL RCPVALTDSE DESPEDMRLP ENSBTAP00000019992/1-680 RKLEARLEKV ADEKWSEDPA TEDEEAAVGL SCPAALTDSE DESPEDMRLP ENSP00000449960/1-691 RKLEARLEKV ADEKWNEDAT TEDEEAAVGL SCPAALTDSE DESPEDMRLP bmy_04694T0/1-875 RKLEARLEKV ADEKWNEDPA TEDEEAAAGL RCPAALTDSE DESPEDMRLP BACU008082/1-717 RKLEARLEKV ADEKWNEDPA TEDEEAAAGL RCPAALTDSE DESPEDMRLP 551 600 ENSTTRP00000014132/1-691 PYGLCERGDL GSSPAAGPRE ASPLVVISQP APIAPHLSGP AEDSSSDSEA ENSBTAP00000019992/1-680 PYSLCESGDP GSSPATGPRE ASPLVVISQP APIAPQLSGP AEDSSSDSEA ENSP00000449960/1-691 PYGLCERGDP GSSPA-GPRE ASPLVVISQP APISPHLSGP AEDSSSDSEA bmy_04694T0/1-875 PYGLCEHGDL GSSPATGPRE ASPLVVISQP APIAPHLSGP AEDSSSDSEA BACU008082/1-717 PYGLCERGDL GVSPATGPRE ASPLVVISQP APIAPHFSGP AEDSSSDSEA 601 650 ENSTTRP00000014132/1-691 EDEKSVLMAA VQSGGEEANL LLPELGNAFY DMA------- ---------- ENSBTAP00000019992/1-680 EDEKSVLMAA VQSGGEEANL LLPELGSAFY DMA------- ---------- ENSP00000449960/1-691 EDEKSVLMAA VQSGGEEANL LLPELGSAFY DMA------- ---------- bmy_04694T0/1-875 EDEKSVLMAA VQSGGEEANL LLPELGNAFY DMA------- ---------- BACU008082/1-717 EDEKSVLMAA VQSGGEEANL LLPELGNAFY DMASSTIFRG AQIALHPLSP 651 700 ENSTTRP00000014132/1-691 --------SG FAAGPLSEAS TGGPTTPPWK ECPICKERFP AESDKDALED ENSBTAP00000019992/1-680 --------SG FAVGPLTEAS TGGPATPPWK ECPICKERFP VHTQTHTYT- ENSP00000449960/1-691 --------SG FTVGTLSETS TGGPATPTWK ECPICKERFP AESDKDALED bmy_04694T0/1-875 --------SG FAVGPLSEAS TGGPTTPPWK ECPICKERFP AESDKDALED BACU008082/1-717 APTPSPTTSG FAVGPLSEAS TGGPTTPPWK ECPICKERFP AESDKDALED 701 750 ENSTTRP00000014132/1-691 HVDGHF---- ---------- ---------- ---------- ---------- ENSBTAP00000019992/1-680 HTHTHA---- ---------- ---------- ---------- ---------- ENSP00000449960/1-691 HMDGHF---- ---------- ---------- ---------- ---------- bmy_04694T0/1-875 HLREQVEERL SFYETGEIPR KNLDVMKEAM FQAEEVAAEI TRKLEKQEKK BACU008082/1-717 HVDGHF---- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000014132/1-691 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019992/1-680 ---------- ---------- ---------- ---------- ---------- ENSP00000449960/1-691 ---------- ---------- ---------- ---------- ---------- bmy_04694T0/1-875 RLKKEKKRLA AIALVSSENS SSIPEECEET SERPKKKKKQ KPQEAPQENG BACU008082/1-717 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000014132/1-691 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000019992/1-680 ---------- ---------- ---------- ---------- ---------- ENSP00000449960/1-691 ---------- ---------- ---------- ---------- ---------- bmy_04694T0/1-875 MEDPSISSKP KKKSFSKEEL VSSDLEETAG SGSLTKRKKS FPKEEPDSDP BACU008082/1-717 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000014132/1-691 ---------- ----FFSTQD PFTFE----- ---------- ---------- ENSBTAP00000019992/1-680 ---------- ---------- ---------- ---------- ---------- ENSP00000449960/1-691 ---------- ----FFSTQD PFTFE----- ---------- ---------- bmy_04694T0/1-875 EESGNKRVPK KKRKFSSKEE PLSSGPEEAA ASKSHSSKKK KKLRKLSQEN BACU008082/1-717 ---------- ----FFSTQD PFTFE----- ---------- ----------