KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:00 2014 Check: 00 .. Name: ENSP00000335651/1-749 Len: 754 Check: 2140 Weight: 1.00 Name: ENSBTAP00000019994/1-750 Len: 754 Check: 9031 Weight: 1.00 Name: ENSTTRP00000000534/1-749 Len: 754 Check: 1177 Weight: 1.00 Name: bmy_18684T0/1-668 Len: 754 Check: 2024 Weight: 1.00 Name: BACU016050/1-750 Len: 754 Check: 1665 Weight: 1.00 // 1 50 ENSP00000335651/1-749 MEEESGEELG LDRST-PKDF HFYHMDLYDS EDRLHLFPEE NTRMRK-VVQ ENSBTAP00000019994/1-750 MEEGAGEAPG LGRSAASKDF RFYHMDLYDS QDRLQIFPEE STRMRREGVQ ENSTTRP00000000534/1-749 MEGEAGEAPG LGRPAASKDF HFRHMDLYDS EDRLQIFPEE DTQMRREVVQ bmy_18684T0/1-668 MEGEAGEAPG LGRPTASKDF HFHHTDLYDS EDRLQIFPEE DTQMRREVVQ BACU016050/1-750 MEGEAREAPG LGRPAASKDF HFHHTDLYDS EDRLQIFPEE DTQMRRAVVQ 51 100 ENSP00000335651/1-749 AEMANES-RG AGDGKAQRDL QEEVDELVHL YGLEDDHELG DEFVDENIPR ENSBTAP00000019994/1-750 AEMTHEPMRG GVKVKAPRDL GEEVDELVHL YGLEDDHELG DEFIEENTPR ENSTTRP00000000534/1-749 AEMTNEP-RQ PMQGKAQRDL GEEVDELVHL YGLEDDHELG DEFIDKSRPR bmy_18684T0/1-668 AEMTNEP-RE PMKGKAQRDL GEEVDELVHL YGLEDDHELG DEFIDESTPR BACU016050/1-750 AEMTNQP-RE PMKGKSQRDL GEEVDELVHL YGLEDDHELG DEFIDESTPR 101 150 ENSP00000335651/1-749 TGVSEYPPYM MKRRDPAREQ RDWRLSGEAA EAEDLGFGGW GSAGQCQDLR ENSBTAP00000019994/1-750 IEVSEYPSYM MMG----SEQ RDWRPTGEAA QGEDLGFMGW GSAGQCQDLR ENSTTRP00000000534/1-749 IEVSEYAPYM IMGREPLREQ RDWRLSGEAA KAEDLGFGAW GSAGHCRDLR bmy_18684T0/1-668 IEVSEYPPYM MMGREPLREQ RDWRLSGEAA KAEDLGFGAW GSAGQCQDLR BACU016050/1-750 IEVSEYPPYM MMGREPLREQ RDWRLSGEAA KAEDLGFGAW GSAGQCQDLR 151 200 ENSP00000335651/1-749 EAYRYTHGRA SEEYECYVIP EEEDEEEAAD VFCVTCKTPI RAFQKVFDEH ENSBTAP00000019994/1-750 EAYRYSHGRA SEEYECYVIP EEEDEEEAAD VFCVTCKTPI RASEKDQDEH ENSTTRP00000000534/1-749 EAYRYTHGHA SEEYECYVIP EEEDEEEAAD VFCVTCKTPV RASGKVLVEH bmy_18684T0/1-668 EAYRYTHGHA SEEYECYVIP EEEDEEEAAD VFCVTCKTPI RASEKVFDEH BACU016050/1-750 EAYRYTHGHA SEEYECYVIP EEEDEEEAAD IFCVTCKTPV RASEKVFDEH 201 250 ENSP00000335651/1-749 KEHEVIPLNE ALESAKDEIH KNMYKLEKQI IEMENFANHL EEVFITVEEN ENSBTAP00000019994/1-750 KQHEVTPLSK ALESAKDEIH KNMYKLEKQI IEMENFASHL EEVFITVEEN ENSTTRP00000000534/1-749 KEHEVTPLGK ALESAKDEIH KNMYKLEKQI IEMENFASHL EEVFITVEEN bmy_18684T0/1-668 KEHEVTXLSK ALESAKDEIH KNMYKLEKQI IEMENFASHL EEVFITVEEN BACU016050/1-750 KEHEVTPLSK ALESAKDEIH KNMYKLEKQI IEMENFASHL EEVFITVEEN 251 300 ENSP00000335651/1-749 FGKQEQNFES HYNEILETLA QKYEEKIQAL GEKKKEKLEA LYGQLVSCGE ENSBTAP00000019994/1-750 FGRQEQNFES HYNEILETLA QKYEEKIQAL GEKKKEKLEA LYGQLVNCGE ENSTTRP00000000534/1-749 FGRQEKNFES HYNEILETLA QKYEEKIQAL GEKKKEKLEA LYGQLVSCGE bmy_18684T0/1-668 FGRQEKNFES HYNEILETLA QKYEEKIQAL GEKKKEKLEA LYGQLVSCGE BACU016050/1-750 FGRQEKNFES HYNEILETLA QKYEEKIQAL GEKKKEKLEA LYGQLVSCGE 301 350 ENSP00000335651/1-749 NLDTCKELME TIEEMCHEEK VDFIKDAVAM ADRLGKFLKT KTDVEISAQP ENSBTAP00000019994/1-750 NLDTCKELME TIEEMCHEEK VDFIKDAVAM ADRLGKFLKT KTDEEISAQP ENSTTRP00000000534/1-749 NLETCKELME TIEEMCHEEK VDFIK--VSN NHRLGKFLKT KTDVEISAQP bmy_18684T0/1-668 NLETCKELME TIEEMCHEEK VDFIKDAVAM ADRLGKFLKT KTDVEISAQP BACU016050/1-750 NLETCKELME TIEEMCHEEK VDFIKDAVAM ADRLGKFLKT KTDVEISAQP 351 400 ENSP00000335651/1-749 EFEDQTLDFS DVEQLMGSIN TIPAPSAPVI NPQVPNSATG SSVRVCWSLY ENSBTAP00000019994/1-750 DFEDQTLDFS DVEELMGSIN TIPAPSAPVI NPQAPNSATG SSVRVCWSLY ENSTTRP00000000534/1-749 EFEDQTLDFS DVEELMGAIN TIPAPSAPVI NPQAPNSATG SSVRVCWSLY bmy_18684T0/1-668 EFEDQTLDFS DVEELMGSIN TIPAPSAPVI NPQAPNSATS SSVRVCWSLY BACU016050/1-750 EFEDQTLDFS DVEELMGSIN TIPAPSAPVI NPQAPNSATS SSVRVCWSLY 401 450 ENSP00000335651/1-749 SDDTVESYQL SYRPVQDSSP GTDQAEFTVT VKETYCSVTN LVPNTQYEFW ENSBTAP00000019994/1-750 SDDTVESYQL SYRPVQDGSP GKEQTEVTMT IKETYCSVTN LLPNTQYEFW ENSTTRP00000000534/1-749 SDDTVESYQL SYWPVQDSSP GKDRAEFTMT VKETYCSVTN LVPNTQYEFL bmy_18684T0/1-668 SDDTVESYQL SYWPVQDSSP GKDGAEFTMT VKETYCSVTN LVPNTQYEFL BACU016050/1-750 SDDTIESYQL SYWPVQDSSP GKDGAAFTMT VKETYCSVTN LVPNTQYEFL 451 500 ENSP00000335651/1-749 VTAHNRAGPS PSSERAVYMT APSPPIIKTK EIRSCEEAVL ICWESGNLNP ENSBTAP00000019994/1-750 VTAQNRAGLS PTSERAVYMT APCPPIIKSK EIRSCEEAAL ISWESGNLNP ENSTTRP00000000534/1-749 VTAQNRAGLS PASECAVYMT APCPPIMKSK EIRSCEEAAL ICWESGNLNP bmy_18684T0/1-668 VTAQNRAGLS PASECAVYMT APCPPIIKSK EIRSCEEAAL ICWESGNLNP BACU016050/1-750 VTAQNRAGLS PASECAVYMT APCPPIIKSK EIRSCEEAAL ICWESGNLNP 501 550 ENSP00000335651/1-749 VDSYTVELTQ AESPEASGVT ESVVGIPTCE SVVQLQPGRS YIIYVRALNM ENSBTAP00000019994/1-750 VDSYTVELTQ AETPGASGVT ESVVGIPTCE CLVQLQPRQN YTIYVRALNV ENSTTRP00000000534/1-749 VDSYTVELTQ AEVPGASGVT ESVVGIPTCE CLVQLQPRQS YTIYVRALNV bmy_18684T0/1-668 VDSYTVELTQ AEMPGASGVT ESVVGIPTCE CLVQLQPRQS YTIYVRALNV BACU016050/1-750 VDSYTVELTQ AETPGASGVT ESVVGIPTCE CLVQLQPQQS YTIYVRALNV 551 600 ENSP00000335651/1-749 GGPSVRSEPA TVHTIGSYFR LNKDTCHPWL TISEDGLTAV RSERRTPARE ENSBTAP00000019994/1-750 GGPSARSEPA TVHTTGSYFS LDEHTCHPRL TVSEDGLTVV RSERRGPAKE ENSTTRP00000000534/1-749 GGPSARSEPA TVHTTGSYFR LNEHTCHPWL TVSEDGLTVV RSERKASARE bmy_18684T0/1-668 GGPSARSEPA TVHTTGSYFH LNEHTRHPWL TVSEDGLTVV RSERKAPAGE BACU016050/1-750 GGPSARSEPA TVHTTGSYFH LNEHTRHPWL TVSEDGLTVV RSERKAPAGE 601 650 ENSP00000335651/1-749 LSPSDTHFTR --CVAVMGNL IPVRGHHYWE VEVDEHLDYR VGVAFADVRK ENSBTAP00000019994/1-750 PVPSDAQFTR TRCAAVMGNL IPVRGRHYWE VEVDECLDYT VGVAFEDVPR ENSTTRP00000000534/1-749 PLPSDTRFTR --CVAVMGNL IPVRGRHYWE VEVDECLDYT VGVAFEDVPK bmy_18684T0/1-668 PLPSDTRFTR --CVAVMGNL IPVRGRHYWE VEVDECLDYT VGVAFEDVPK BACU016050/1-750 PLPSDTRFTR --CVAVMGNL IPVRGRHYWE VEVDECLDYT VGVAFEDVPK 651 700 ENSP00000335651/1-749 QEDLGANCLS WCMRHTFASS RHKYEFLHNR TTPDIRITVP PKKIGILLDY ENSBTAP00000019994/1-750 QEDLGANRLS WCMRHAFASS RHKYEFLHNK MTPDIRITVP PKKIGILLDY ENSTTRP00000000534/1-749 QEDLGANRLS WCMRHTFASS RHKYEFLHNK MTPDIRITVS PRKIGILLDY bmy_18684T0/1-668 QEDLGANCLS WCMRHTFASS R--------- ---------- ---------- BACU016050/1-750 QEDLGANCLS WCMRHTFASS RHKYEFLH-K TTPDIRITVS PRKIGILLDY 701 750 ENSP00000335651/1-749 EHSKLSFFNV DLSQHLYTFS CQLHEFVHPC FSLEKPGCLK VHNGISMPKH ENSBTAP00000019994/1-750 ENAKLSFFNV DISQHLYTFS CQLHQFVHPC FSLEKPGCLK IYNGISMPKH ENSTTRP00000000534/1-749 ENSKLSFFNV DISQHLYTFS CQLHLFVHPC FSLEKPGCLK IHNGISMPKH bmy_18684T0/1-668 ---------- ---------- ---------- ---------- ---------- BACU016050/1-750 ENSKLSFFNV DISQHLYTFS CQLPQFVHPC FSLEKPGCLK IHNGISMPKC 751 800 ENSP00000335651/1-749 VTFY ENSBTAP00000019994/1-750 VTFY ENSTTRP00000000534/1-749 VTFY bmy_18684T0/1-668 ---- BACU016050/1-750 VTFY