KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:02 2014 Check: 00 .. Name: ENSTTRP00000009867/1-382 Len: 477 Check: 8767 Weight: 1.00 Name: ENSP00000351100/1-383 Len: 477 Check: 5206 Weight: 1.00 Name: ENSBTAP00000020021/1-382 Len: 477 Check: 1103 Weight: 1.00 Name: bmy_07852T0/1-451 Len: 477 Check: 3608 Weight: 1.00 Name: BACU019713/1-383 Len: 477 Check: 3961 Weight: 1.00 // 1 50 ENSTTRP00000009867/1-382 ---------- ---------- ---------- ------MDRT CEERPAEDGR ENSP00000351100/1-383 ---------- ---------- ---------- ------MDRT CEERPAEDGS ENSBTAP00000020021/1-382 ---------- ---------- ---------- ------MDRM CEERAAEDGS bmy_07852T0/1-451 LPGPLPRKRC PGPLLPPSDW FFGSATNCCA ARILWFMDRT CEERPAEDER BACU019713/1-383 ---------- ---------- ---------- ------MDRT CEERPAEDER 51 100 ENSTTRP00000009867/1-382 DEEDPDSTEA PARIRDTPED IVLDAPASGL AFHPARDLLA AGDVDGDVFV ENSP00000351100/1-383 DEEDPDSMEA PTRIRDTPED IVLEAPASGL AFHPARDLLA AGDVDGDVFV ENSBTAP00000020021/1-382 DEEDPDATEA PARIRDTPED IVLEAPASGL AFHPARDLLA AGDVDGDVFV bmy_07852T0/1-451 DEEDPDSTEA PARIRDTPED IVLEAPASGL AFHPARDLLA AGDVDGDVFV BACU019713/1-383 DEEDPDSAEA PARIRDTPED IVLEAPASGL AFHPARDILA AGDVDGDVFV 101 150 ENSTTRP00000009867/1-382 FSYSCQEGET KEHWSSGHHL KSCRAVVFSE DGQKLVTVSK DKAIHFLDVE ENSP00000351100/1-383 FSYSCQEGET KELWSSGHHL KACRAVAFSE DGQKLITVSK DKAIHVLDVE ENSBTAP00000020021/1-382 FSYSCQEGET KELWSSGHHL KSCRAVVFSE DGQKLVTVSK DKAIHFLDVE bmy_07852T0/1-451 FSYSCQEGET KEHWSSGHHL KSCRAIVFSE DGQKLVTVSK DKAIHFLDVE BACU019713/1-383 FSYSCQEGET KEHWSSGHHL KSCRAIVFSE DGQKLVTVSK DKAIHFLDVE 151 200 ENSTTRP00000009867/1-382 LGRLQRRISK AHXX------ -----XXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000351100/1-383 QGQLERRVSK AHGA------ -----PINSL LLVDENVLAT GDDTGGICLW ENSBTAP00000020021/1-382 LGRLERRISK AHGA------ -----PINSL LLVDENVLAT GDDTGGIRLW bmy_07852T0/1-451 LGRLERRISK AHGV------ -----PINSL LLVDENVLAT GDDTGGIRLW BACU019713/1-383 LGRLERRISK AHGCSKKFCI CVSSVPINSL LLVDENVLAT GDDTGGIRLW 201 250 ENSTTRP00000009867/1-382 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXX------- ---------- ENSP00000351100/1-383 DQRKEGPLMD MRQHEEYIAD MALDPAKKLL LTA------- ---------- ENSBTAP00000020021/1-382 DQRKEGPLMD MRQHEEYIAD MALDPDKKLL LTA------- ---------- bmy_07852T0/1-451 DQRKEGPLMD MRQHEEYIAD MALDPAKKLL LTARYSLKAA SPPFPVLNVS BACU019713/1-383 DQRKEGPLMD MRQHEEYIAD MALDPAKKLL LTA------- ---------- 251 300 ENSTTRP00000009867/1-382 ---------- -----XXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000351100/1-383 ---------- -----SGDGC LGIFNIKRRR FELLSEPQSG DLTSVTLMKW ENSBTAP00000020021/1-382 ---------- -----SGDGC LGVFNIKRRR FELLSEPQSG DLTSVTLMKY bmy_07852T0/1-451 LGGYLQPSLL LCSLYSGDGC LGVFNIRRRR FELLSEPQSG DLTSVTLMKC BACU019713/1-383 ---------- ---------- -------RYS LKAASPPF-- ---------- 301 350 ENSTTRP00000009867/1-382 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000351100/1-383 GKKVACGSSE GTIYLFNWNG FGATSDRFAL RAESIDCMVP VTESLLCTGS ENSBTAP00000020021/1-382 GRKVACGSSE GTIYLFNWDG FGATSDRFAL RAESIDCMVP VTESLLCAGS bmy_07852T0/1-451 GKKVACGSSE GTIYLFNWDG FGATSDRFAL RAESIDCMVP VTESLLCTGS BACU019713/1-383 --RVKCFPRE GTIYLFNWDG FGATSDRFAL RAESIDCMVP VTESLLCTGS 351 400 ENSTTRP00000009867/1-382 XXXXX----- ---------- XXXXXXPNRV VGSVGQHAGE PVEKLALSHC ENSP00000351100/1-383 TDGVI----- ---------- RAVNILPNRV VGSVGQHTGE PVEELALSHC ENSBTAP00000020021/1-382 TDGVI----- ---------- RAVNILPNRV VGSVGQHAEE PVENLALSHC bmy_07852T0/1-451 TDGVI----- ---------- RAVNILPNRV VGSVGQHAGE PVEKLALSHC BACU019713/1-383 TDGVIRADLT GPYRTLFFLS RAVNILPNRV VGSVGQHAGE PVEKLALSHC 401 450 ENSTTRP00000009867/1-382 GRFLASSGHD QRLKFWDMAQ LRALVVDDYR RRKKKGGPLR ALSSKAWSTD ENSP00000351100/1-383 GRFLASSGHD QRLKFWDMAQ LRAVVVDDYR RRKKKGGPLR ALSSKTWSTD ENSBTAP00000020021/1-382 GCFLASSGHD QRLKFWDMAQ LRALVVDDYR RRKKKGGPLR ALSSKAWSTD bmy_07852T0/1-451 GRFLASSGHD QRLKFWDMAQ LRALVVDDYR RRKKKGGPLR ALSSKAWSTD BACU019713/1-383 GRFLASSGHD QRLKFWDMAQ LRALVVDDYR RRKKKGGPLR ALSSKAWSTD 451 500 ENSTTRP00000009867/1-382 DFFAGLREEG EDATAQ-EEE ETEDDSD ENSP00000351100/1-383 DFFAGLREEG EDSMAQEEKE ETGDDSD ENSBTAP00000020021/1-382 DFFAGLREEG EDAKTL-EEE ESEDDSD bmy_07852T0/1-451 DFFAGLREEG EDATAQEEEE ESEDDSD BACU019713/1-383 DFFAGLREEG EDATAQEEEE ESEDDSD