KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:06 2014 Check: 00 .. Name: ENSBTAP00000020033/1-592 Len: 622 Check: 9112 Weight: 1.00 Name: ENSP00000451463/1-365 Len: 622 Check: 8234 Weight: 1.00 Name: ENSTTRP00000001795/1-593 Len: 622 Check: 1787 Weight: 1.00 Name: bmy_10169T0/1-464 Len: 622 Check: 7770 Weight: 1.00 Name: BACU010814/1-496 Len: 622 Check: 3063 Weight: 1.00 // 1 50 ENSBTAP00000020033/1-592 MDPNSSLLLG PAQ---YPTE PCMEGGRSLS PREQSRCSPF AWSQVPSSSF ENSP00000451463/1-365 MDPNSILLSP QPQICSHLAE ACTEGERSSS PPELDRDSPF PWSQVPSSSP ENSTTRP00000001795/1-593 MNPNFSLLSQ PSRDCSYLAE PRTKDGRSPS PREQGRDSPF PWSQVPSSSL bmy_10169T0/1-464 MDPNFSLLSQ PSRACSYLAE PCTKDGRSPS PREQGRDSPF PWSQVPSSSL BACU010814/1-496 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000020033/1-592 SDPDCFGDEH IQAKRARVET IVQGMFLSPT SLGPGRAPTG DSPSRPEKAQ ENSP00000451463/1-365 TDPEWFGDEH IQAKRARVET IVRGMCLSPN PLVPGNAQAG VSPRCPKKAR ENSTTRP00000001795/1-593 ADPDWFWDEH IQAKRARVET IVRGMCLSPN PPVPGNAPAR DSPCCPEKAR bmy_10169T0/1-464 ADPDWFWDEH IQAKRARVET IIRGMCLSPN PPVPGNAPAR DSPCCP---- BACU010814/1-496 ---------- ---------- ----MCLSPN PPVPGNAPAR DSPCCP---- 101 150 ENSBTAP00000020033/1-592 GRKRKQSLPM QQDPLEAGPV GNRGGGRKGG PRVRGQLHML RQQMRHLQQR ENSP00000451463/1-365 ERKRKQNLPT PQGLLMPAPA WDQ-GNRKGG PRVREQLHLL KQQLRHLQEH ENSTTRP00000001795/1-593 ERKRKQNLPV QQGPLKPGPA GDR-GSRKGG PRVREQLHLL KQQLKHLQEH bmy_10169T0/1-464 ERKRKQNVPV QQGPPKPGPA GDR-GSRKGG PRVREQLHLM KQQLKHLQEH BACU010814/1-496 ERKRKQNLPV QQGPPKPGPA GDR-GSRKGG PRVREQLHLL KQQLKHLQEH 151 200 ENSBTAP00000020033/1-592 ILRAVEPRAA AQGPP----- ----TADQRN GSRSGPWGAD SDHSQGSIGD ENSP00000451463/1-365 ILQAAKPRDT AQGPGGCGTG KGPLSAKQGN GCGPRPWVVD GDHQQGTSKD ENSTTRP00000001795/1-593 ILQAAEPKAP AQGPGGSETG KDPLSVKQRD GSGSRSWAVH SDHRQGSSGD bmy_10169T0/1-464 ILQAAEPKAA AQGPGGSETG KGPLSVKQRN GSGSRAWAVD SAH-HGSSGD BACU010814/1-496 ILQAAEPKAA AQGPGGSETG KGPLSVKQRN GSGSRAWAVD SAH-HGSSGD 201 250 ENSBTAP00000020033/1-592 LSRVEKHRVS EVQYLSEGPR FLPAGARALL ESLKKELTGA ISQAVDSVLQ ENSP00000451463/1-365 LSGAEKHQ-- ----ESEKPS FLPSGAPASL EILRKELTRA VSQAVDSVLQ ENSTTRP00000001795/1-593 LSRVEKHR-- ----ESEEPR LLPSGARALL EILKKELTGA ISQAVDSVLQ bmy_10169T0/1-464 LSRVEKHRVS EVKHQSEEPR FLPSGARALL EILKKELTGA ISQAVDSVLQ BACU010814/1-496 PSRVEKHRVS EVKHQSEEPR FLPSGARALL EILKKELTGA ISQAVDSVLQ 251 300 ENSBTAP00000020033/1-592 KVLVDPSGHL TQLGGRFQGP EPDGRSEPLP PEGSARKDPL PLAALPRRAQ ENSP00000451463/1-365 K--------- ---------- ---------- ---------- ---------- ENSTTRP00000001795/1-593 KVLLDPSGHL THLGRSFPGL VPDGRSEPSP PEGGACKDPL PLAALPRRAQ bmy_10169T0/1-464 KVLLDPSGHL THLGRSFPGL VPDGRSEPSP PEGGACKDPL PLAALPRRAQ BACU010814/1-496 KVLLDPSGHL THLGRSFSGL VPDGRSEPSP PEGGACKDPL PLAALPRRAE 301 350 ENSBTAP00000020033/1-592 PPGEAPLGSL SLAKPLDSPR YPVSPRMIPK PYQAPPADCP LAVAPAHIQE ENSP00000451463/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001795/1-593 PQTGAPLGNL SLAKSLDSPR YPVSPRMIPK PCQGPPANCP LTV-PAHIQE bmy_10169T0/1-464 PQTGAPLGNL SLAKPLDSPR YPVSPRMIPK PYQGPPANCP LTV-PAHIQE BACU010814/1-496 PQTGAPLGNL SLAKPLDSPR YPVSPRMIPK PYQGPPANCP LTV-PAHIQE 351 400 ENSBTAP00000020033/1-592 EWILGQLLGH GPGGRWRGDL PQDPSAPSQP SSKVALRPWG AAKLRPLALG ENSP00000451463/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001795/1-593 DQILSQLLGH RPSGHWRGNL PQDSSPQSHP SSEAALQPWR AAKLQPLALS bmy_10169T0/1-464 DQILSQLLGH GPSGHWRGNL PQDSSPQSHP SSEAALRPWG AAKLRPLALS BACU010814/1-496 DQILSQLLGH GPSGHWRGNL PQDSSPQSHP SSEAALRPWG AAKLRPLALS 401 450 ENSBTAP00000020033/1-592 QQQCPWPFTS TCLERLPLVS PVKMEPGGRQ AGMDALPFSA AHIQE----- ENSP00000451463/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001795/1-593 QRQCPWLFKS TCLERLPLVP SVKMEQGGLQ AVTDALPFSS ALYIS----- bmy_10169T0/1-464 QQQCPWLFTS TCLERLPLVP SVKMEQGGLQ AVTDALPFSS ALYIS----- BACU010814/1-496 QQQCPWLFTS TCLERLPLVP SVKMEQGGLQ AVTDALPFSS ALYISFTSNR 451 500 ENSBTAP00000020033/1-592 ---------- --GLNPGHLK KAKLMFFFTR YPSSSLLKAY FPDVQFNRCI ENSP00000451463/1-365 ---------- ---------- ---------- ---------- -----FNRCI ENSTTRP00000001795/1-593 ---------- -EGLNPGHLK KAKLMFFFTR YPSSNLLKAY FPDVQFNRCI bmy_10169T0/1-464 ---------- ---------- ---------- ---------- FTSNRSSRCH BACU010814/1-496 SSRCHSPERQ EEGLNPGHLK KAKLMFFFTR YPSSNLLKAY FPDVQFNRCI 501 550 ENSBTAP00000020033/1-592 TSQMIK-WFS NFREFYYIQM EKFARQAISD GVTNPKMLVI LRDSELFRAL ENSP00000451463/1-365 TSQMIK-WFS NFREFYYIQM EKSARQAISD GVTNPKMLVV LRNSELFQAL ENSTTRP00000001795/1-593 TSQMIK-WFS NFREFYYIQM EKFARQAISD GVTNPKMLVV LRNSELFRAL bmy_10169T0/1-464 SPERQEVW-- ---------- ---------- ---------T MRG------- BACU010814/1-496 TSQMIK-WFS NFREFYYIQM EKFARQAISD GVTNPKMLVV LRNSELFRAL 551 600 ENSBTAP00000020033/1-592 NMHYNKGNDF EVPDCFLEIA SLTLQEFFKA VSSGKDADPS WKKPIYKIIS ENSP00000451463/1-365 NMHYNKGNDF EVPDCFLEIA SLTLQEFFRA VSAGRDSDPS WKKPIYKIIS ENSTTRP00000001795/1-593 NMHYNKGNDF EVPDCFLEIA SLTLQEFFRA VSAGKDSDPS WKKPIYKIIS bmy_10169T0/1-464 ------GGDK ---------- ---------- ---------- ---------- BACU010814/1-496 NMHYNKGNDF ES----LKLI IFCLCSFMNM GR-------- ---------- 601 650 ENSBTAP00000020033/1-592 KLDSDIPEIF KSSSYPQELF RN ENSP00000451463/1-365 KLDSDIPEIF KSSSYPQ--- -- ENSTTRP00000001795/1-593 KLDSDIPEIF KSSSYPQE-- -- bmy_10169T0/1-464 ---------- ---------- -- BACU010814/1-496 ---------- ---------- --