KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:08 2014 Check: 00 .. Name: ENSP00000388713/1-399 Len: 553 Check: 9175 Weight: 1.00 Name: ENSBTAP00000020055/1-399 Len: 553 Check: 924 Weight: 1.00 Name: BACU012667/1-553 Len: 553 Check: 3477 Weight: 1.00 Name: bmy_21339T0/1-423 Len: 553 Check: 5843 Weight: 1.00 Name: ENSTTRP00000011513/1-399 Len: 553 Check: 9786 Weight: 1.00 // 1 50 ENSP00000388713/1-399 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020055/1-399 ---------- ---------- ---------- ---------- ---------- BACU012667/1-553 MRMGRASGVA QALIGPAGRK WAVKASLLFL SGGCGSANVG CETGPIHRCG bmy_21339T0/1-423 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011513/1-399 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000388713/1-399 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020055/1-399 ---------- ---------- ---------- ---------- ---------- BACU012667/1-553 FGALAAFLRR CHALAAGPRW ARGPLGPPGP SSGPGTGRKV FPGRWPPPLQ bmy_21339T0/1-423 ---------- ---------- ---------- ----MEENSK LPTKYLSSY- ENSTTRP00000011513/1-399 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000388713/1-399 ---------- ---------- ---MAQRAFP NPYADYNKSL AEGYFDAAGR ENSBTAP00000020055/1-399 ---------- ---------- ---MAQRAFP NPYADYNKSL AEGYFDSAGR BACU012667/1-553 LGRGPYLNVD FLFPLFCRLV SGIMAQRAFP NPYADYNKSL AEGYFDSAGR bmy_21339T0/1-423 ---------- ----ILLPLV SGIMAQRAFP NPYADYNKSL AEGYFDSAGR ENSTTRP00000011513/1-399 ---------- ---------- ---MAQRAFP NPYADYNKSL AEGYFDSAGR 151 200 ENSP00000388713/1-399 LTPEFSQRLT NKIRELLQQM ERGLKSADPR DGTGYTGWAG IAVLYLHLYD ENSBTAP00000020055/1-399 LTPEFSQRLN NKIRELLQQM ERGLKSADPR DSTVYTGWAG IAVLYLHLYD BACU012667/1-553 LTTEFSQRLN NKIRELLQRM ERNLKSADPR DSTVYTGWAG IAVLYLHLYD bmy_21339T0/1-423 LTTEFSQRLN NKIRELLQRM ERGLKSADPR DSTVYTGWAG IAVLYLHLYD ENSTTRP00000011513/1-399 LTTEFSQRLN NKIRELLQQM ERGLKSADPR DSTVYTGWAG IAVLYLHLYD 201 250 ENSP00000388713/1-399 VFGDPAYLQL AHGYVKQSLN CLTKRSITFL CGDAGPLAVA AVLYHKMNNE ENSBTAP00000020055/1-399 VFGDPNYLQM AHGYVKQSLN SLSKHSITFL CGDGGPLAVA AVVHHKMNNE BACU012667/1-553 VFGDPAYLQM AHGYVKQSLN CLTKHSITFL CGDGGPLAVA AVVHHKMNNE bmy_21339T0/1-423 VFGDPTYLQM AHGYVKQSLN CLTKHSITFL CGDGGPLAVA AVVHHKMNNE ENSTTRP00000011513/1-399 VFGDPTYLQK AHDYVKQSLN CLTKHSITFL CGDGGPLAVA AVVHHKMNNE 251 300 ENSP00000388713/1-399 KQAEDCITRL IHLNKIDPHA PNEMLYGRIG YIYALLFVNK NFGVEKIPQS ENSBTAP00000020055/1-399 KQAEECITRL IHLNKIDPHA PSEMLYGRMG YISALLFVNK NFGEEKIPQS BACU012667/1-553 KRAEDCITRL IHLNKIDPHA PNEMLYGRMG YICALLFVNK NFGVEKIPHS bmy_21339T0/1-423 KRAEDCITRL IHLNKIDPHA PNEMLYGRMG YICALLFVNK NFGVEKIPQS ENSTTRP00000011513/1-399 KRAEDCITRL IHLNKIDPHA PNEMLYGRMG YICALLFVNK NFGVEKIPQS 301 350 ENSP00000388713/1-399 HIQQICETIL TSGENLARKR NFTAKSPLMY EWYQEYYVGA AHGLAGIYYY ENSBTAP00000020055/1-399 HIQQICETVL TSGEDLARKR RFTGKTPLMY EWYQEYYVGA AHGLAGIYYY BACU012667/1-553 HIQQICETVL TSGEDLARKR NFTGKTPLLY EWYQEYYVGA AHGLAGIYYY bmy_21339T0/1-423 HIQQICETVL TSGEDLARKR NFTGKTPLLY EWYQEYYVGA AHGLAGIYYY ENSTTRP00000011513/1-399 HIQQICETVL TSGEDLARKR NFTGRTPLLY EWYQEYYVGA AHGLAGIYYY 351 400 ENSP00000388713/1-399 LMQPSLQVSQ GKLHSLVKPS VDYVCQLKFP SGNYPPCIGD NRDLLVHWCH ENSBTAP00000020055/1-399 LMQPSLQVSH AKLHNLVKPS VDYVCQLKFP SGNYPPCVDD SRDLLIHWCH BACU012667/1-553 LMQPSLQVSH GKLYSLVKPS VDYVCQLKFP SGNYPPCVDD TRDLLVHWCH bmy_21339T0/1-423 LMQPSLQVSH GKLHSLVKPS VDYVCQLKFP SGNYPPCVDD TRDLLVHWCH ENSTTRP00000011513/1-399 LMQPSLQVSH GKLHSLVKPS VDYVCQLKFP SGNYPPCVDD TRDLLVHWCH 401 450 ENSP00000388713/1-399 GAPGVIYMLI QAYKVFREEK YLCDAYQCAD VIWQYGLLKK GYGLCHGSAG ENSBTAP00000020055/1-399 GAPGVIYMLT QAYKVFKEER YLNDAYQCAD VIWQYGLLKK GYGLCHGTAG BACU012667/1-553 GSPGVIYMLI QAYKVFKEER YLSDAYQCAD VIWQYGLLKK GYGLCHGAAG bmy_21339T0/1-423 GSPGVIYMLI QAYKVFKEER YLNDAYQCAD VIWKYGLLKK GYGLCHGAAG ENSTTRP00000011513/1-399 GSPGVIYMLI QAYKVFKEER YLNDAYQCAD VIWQYGLLKK GYGLCHGAAG 451 500 ENSP00000388713/1-399 NAYAFLTLYN LTQDMKYLYR ACKFAEWCLE YGEHGCRTPD TPFSLFEGMA ENSBTAP00000020055/1-399 NAYAFLSLYS LTQDAKYLYR ACKFAEWCLD YGEHGCRTPD TPFSLFEGMA BACU012667/1-553 NAYAFLSLYN LTQDAKYLYR ACKFAEWCLD YGEHGCRTPD TPFSLFEGMA bmy_21339T0/1-423 NAYAFLSLYN LTQDAKYLYR ACKFAEWCLD YGEHGCRTPD TPFSLFEGMA ENSTTRP00000011513/1-399 NAYAFLSLYN LTQDMKYLYR ACKFAEWCLD YGEHGCRTPD TPFSLFEGMA 501 550 ENSP00000388713/1-399 GTIYFLADLL VPTKARFPAF EL-------- ---------- ---------- ENSBTAP00000020055/1-399 GTIYFLADLL VPTKARFPAF EL-------- ---------- ---------- BACU012667/1-553 GTIYFLADLL VPTKARFPAF ELYKTKYDIQ GSYADVILPF TGKGWNCMYF bmy_21339T0/1-423 GTIYFLADLL VPTKARFPAF EL-------- ---------- ---------- ENSTTRP00000011513/1-399 GTIYFLADLL VPKKARFPAF EL-------- ---------- ---------- 551 600 ENSP00000388713/1-399 --- ENSBTAP00000020055/1-399 --- BACU012667/1-553 CVP bmy_21339T0/1-423 --- ENSTTRP00000011513/1-399 ---