KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:10 2014 Check: 00 .. Name: ENSP00000437550/1-1130 Len: 1130 Check: 5378 Weight: 1.00 Name: ENSBTAP00000020062/1-1123 Len: 1130 Check: 3456 Weight: 1.00 Name: BACU017491/1-1127 Len: 1130 Check: 2909 Weight: 1.00 Name: bmy_02563T0/1-1107 Len: 1130 Check: 3711 Weight: 1.00 Name: ENSTTRP00000005702/1-958 Len: 1130 Check: 2858 Weight: 1.00 // 1 50 ENSP00000437550/1-1130 MKRSEKPEGY RQMRPKTFPA SNYTVSSRQM LQEIRESLRN LSKPSDAAKA ENSBTAP00000020062/1-1123 MKRSEKPEGY RQMRPKTFPA SNYTGSSRQM LQEIRESLRN LSKPSDAAKA BACU017491/1-1127 MKRSEKPEGY RQMRPKTFPA SNYTGSSRQM LQEIRESLRN LSKPSDAAKA bmy_02563T0/1-1107 MKRSEKPEGY RQMRPKTFPA SNYTGSSRQM LQEIRESLRN LSKPSDAAKA ENSTTRP00000005702/1-958 MKRSEKPEGY RQMRPKTFPA SNYTGSSRQM LQEIRESLRN LSKPSDAAKA 51 100 ENSP00000437550/1-1130 EHNMSKMSTE DPRQVRNPPK FGTHHKALQE IRNSLLPFAN ETNSSRSTSE ENSBTAP00000020062/1-1123 EQNMGKMSSE DPRQVRNPPK FGMHHKALLE IRNSLQPFAN ET--SRSPSE BACU017491/1-1127 EHNLSKTSAE DPRQVRNPPK FGMHHKALLE IRNSLQPFAN ET--SRSTSE bmy_02563T0/1-1107 EHNMSKMSAE DPRQVRNPPK FGMHHKALLE IRNSLQPFAN ET--SRSTSE ENSTTRP00000005702/1-958 EHNMSKMSAE DPRQVRNPPK FGMHHKALLE IRNSLQPFAN ET--SRSTSD 101 150 ENSP00000437550/1-1130 VNPQMLQDLQ AAGFDEDMVI QALQKTNNRS IEAAIEFISK MSYQDPRREQ ENSBTAP00000020062/1-1123 VNPQMLQDLQ AAGFDEDMVI QALQKTNNRS IEAAIEFISK MSYQDPRREQ BACU017491/1-1127 VNPQMLQDLQ AAGFDEDMVI QALQKTNNRS IEAAIEFISK MSYQDPRREQ bmy_02563T0/1-1107 VNPQMLQDLQ AAGFDEDMVI QALQKTNNRS IEAAIEFISK MSYQDPRREQ ENSTTRP00000005702/1-958 VNPQMLQDLQ AAGFDEDMVI QALQKTNNRS IEAAIEFISK MSYQDPRREQ 151 200 ENSP00000437550/1-1130 MAAAAARPIN ASMKPGNVQQ SVNRKQSWKG SKESLVPQRH GPPLGESVAY ENSBTAP00000020062/1-1123 MAAAAARPIN ANLKPGSVQQ SINRKQSWKG SKESLVPQRH GPPLGESGAY BACU017491/1-1127 MAAAAARPIN ANLKPGSVQQ SVNRKQSWKG SKESLVPQRH GPPLGESVAY bmy_02563T0/1-1107 MAAAAARPIN ANLKPGSVQQ SVNRKQSWKG SKESLVPQRH GPPLGESVAY ENSTTRP00000005702/1-958 MAAAAARPIN ANLKPGSVQQ SVNRKQSWKG SKESLVPQRH GPPLGESVAY 201 250 ENSP00000437550/1-1130 HSESPNSQTD VGRPLSGSGI SAFVQAHPSN GQRVNPPPPP QVRSVTPPPP ENSBTAP00000020062/1-1123 RSESPNSQTD VGRPLSGSGI TAFTPAHPSN GQRVNPPPPP QVRSVTPPPP BACU017491/1-1127 RSESPNSQTD VGRPLSGSGI TAFTQAHPSN GQRVNPPPPP QVRSVTPPPP bmy_02563T0/1-1107 RSESPNSQTD VGRPLSGSGI TAFTQAHPSN GQRVNPPPPP QVRSVTPPPP ENSTTRP00000005702/1-958 RSESPNSQTD VGRPLSGSGI TAFTQAHPSN GQRVNPPPPP QVRSVTPPPP 251 300 ENSP00000437550/1-1130 PRGQTPPPRG TTPPPPSWEP NSQTKRYSGN MEYVISRISP VPPGAWQEGY ENSBTAP00000020062/1-1123 PRGQTPPPRG TTPPPPSWEP NSQTKRYSGN MDYVISRISP VPPGAWQEGY BACU017491/1-1127 PRGQTPPPRG TTPPPPSWEP NSQTKRYSGN MEYVISRISP VPPGAWPEGY bmy_02563T0/1-1107 PRGQTPPPRG TTPPPPSWEP NSQTKRYSGN MEYVISRISP VPPGAWQEGY ENSTTRP00000005702/1-958 PRGQTPPPRG TTPPPPSWEP NTQTKRYSGN MEYVISRISP VPPGAWQEGY 301 350 ENSP00000437550/1-1130 PPPPLNTSPM NPPNQGQRGI SSVPVGRQPI IMQSSSKFNF PSGRPGMQNG ENSBTAP00000020062/1-1123 PPPPLNTSPM NPPNQGQRGI NSVPVGRQPI IMQSSNKFNF PPGRPGIQNG BACU017491/1-1127 PPPPLNTSPM NPPNQGQRGI NSVPVGRQPI IMQSANKFNF PPGRPGIQNG bmy_02563T0/1-1107 PPPPLNTSPM NPPNQGQRGI NSVPVGRQPI IMQSANKFNF PPGRPGIQNG ENSTTRP00000005702/1-958 PPPPLNTSPM NPPNQGQRGI NSVPVGRQPI IMQSANKFNF PPGRPGIQNG 351 400 ENSP00000437550/1-1130 TGQTDFMIHQ NVVPAGTVNR QPPPPYPLTA ANGQSPSALQ TGGSAAPSSY ENSBTAP00000020062/1-1123 SGQTDFMMHQ NVVPAGAVNR QPPPPYPLTP TNGQSPSALQ TGGSAAPSSY BACU017491/1-1127 SGQTDFMIHQ N-VPAGAVNR QPPPPYPLTP ANGQSPSALQ TGGPAAPSSY bmy_02563T0/1-1107 SGQTDFMIHQ NVVPAGAVNR QPPPPYPLTP ANGQSPSALQ TGGSAAPSSY ENSTTRP00000005702/1-958 SGQTDFMIHQ NVVPAGAVNR QPPPPYPLTP ANGQSPSALQ TGGSAAPSSY 401 450 ENSP00000437550/1-1130 TNGSIPQSMM VPNRNSHNME LYNISVPGLQ TNWPQSSSAP AQSSPSSGHE ENSBTAP00000020062/1-1123 TNGNIPQAMM VPNRNSHNME LYNINIPGLQ TTWPQSSSAP AQSSPSSGHE BACU017491/1-1127 PNGNIPQSMM VPNRNSHNME LHNINVPGLQ TTWPQSSSAP AQSSPSSGHE bmy_02563T0/1-1107 TNGNIPQSMM VPNRNSHNME LYNINVPGLQ TTWPQSSSAP AQSSPSSGHE ENSTTRP00000005702/1-958 TNGNIPQSMM VPNRNSHNME LYNINVPGLQ TTWPQSSSAP AQSSPSSGHE 451 500 ENSP00000437550/1-1130 IPTWQPNIPV RSNSFNNPLG NRASHSANSQ PSATTVTAIT PAPIQQPVKS ENSBTAP00000020062/1-1123 IPTWQPNIPV RSNSFNNPLG NRTNHSANSQ PSATTVTAIT PAPIQQPVKS BACU017491/1-1127 IPTWQPNIPV RSNSFNNPLG NRTSHSANSQ PSATTVTAIT PAPIQQPVKS bmy_02563T0/1-1107 IPTWQPNIPV RSNSFNNPLG NRTSHSANSQ PSATTVTAIT PAPIQQPVKS ENSTTRP00000005702/1-958 ISTWQPNIPV RSNSFNNPL- NRTSHSANSQ PSATTVTAIT PAPIQQPVKS 501 550 ENSP00000437550/1-1130 MRVLKPELQT ALAPTHPSWI PQPIQTVQPS PFPEGTASNV TVMPPVAEAP ENSBTAP00000020062/1-1123 IRVLKPELQT ALAPTHPSWI PQPVQSVQPS PFSEG----- AVMPPVAEAP BACU017491/1-1127 IRVLKPELQT ALAPTHPSWI PQPIQTVQPG PFSEGTTSNM TVMPPVAEAP bmy_02563T0/1-1107 IRVLKPELQT ALAPTHPSWI PQPIQTVQPG PFSEGTTSNM TVMPPVAEAP ENSTTRP00000005702/1-958 IRVLKPELQT ALAPTHPSWI PQPIQTVQPG PFSEGTTSNM TVMPPVAEAP 551 600 ENSP00000437550/1-1130 NYQGPPPPYP KHLLHQNPSV PPYESISKPS KEDQPSLPKE DESEKSYENV ENSBTAP00000020062/1-1123 NYQGPPPPYP KHLLHQNPSV PPYESVSKSS KEDQPSLPKE DESEKSYDNV BACU017491/1-1127 TYQGPPPPYP KHLLHQNPSV PPYESINKSS KEEQPSLPKE DESEKSYENV bmy_02563T0/1-1107 NYQGPPPPYP KHLLHQNPSV PPYESINKSS KEEQPSLPKE DESEKSYENV ENSTTRP00000005702/1-958 NYQGPPPPYP KHLLHQNPSV PPYESVNKSS KEEQPSLPKE DESEKSYENV 601 650 ENSP00000437550/1-1130 DSGDKEKKQI TTSPITVRKN KKDEERRESR IQSYSPQAFK FFMEQHVENV ENSBTAP00000020062/1-1123 DTGDKEKKQI TTSPITVRKN KKDEERRESR IQSYSPQAFK FFMEQHVENV BACU017491/1-1127 DNGDKEKKQI TTSPITVRKN KKDEERRESR IQSYSPQAFK FFMEQHVENV bmy_02563T0/1-1107 DNGDKEKKQI TTSPITVRKN KKDEERRESR IQSYSPQAFK FFMEQHVEN- ENSTTRP00000005702/1-958 DNGDKEKKQI TTSPITVRKN KKDEERRESR IQSYSPQAFK FFMEQHVENV 651 700 ENSP00000437550/1-1130 LKSHQQRLHR KKQLENEMMR VGLSQDAQDQ MRKMLCQKES NYIRLKRAKM ENSBTAP00000020062/1-1123 LKSHQQRLHR KKQLENEMMR VGLSQDAQDQ MRKMLCQKES NYIRLKRAKM BACU017491/1-1127 LKSHQQRLHR KKQLENEMMR VGLSQDAQDQ MRKMLCQKES NYIRLKRAKM bmy_02563T0/1-1107 ---------- ---------- VGLSQDAQDQ MRKMLCQKES NYIRLKRAKM ENSTTRP00000005702/1-958 LKSHQQRLHR KKQLENEMMR VGLSQDAQDQ MRKMLCQKES NYIRLKRAKM 701 750 ENSP00000437550/1-1130 DKSMFVKIKT LGIGAFGEVC LARKVDTKAL YATKTLRKKD VLLRNQVAHV ENSBTAP00000020062/1-1123 DKSMFVKIKT LGIGAFGEVC LARKVDTKAL YATKTLRKKD VLLRNQVAHV BACU017491/1-1127 DKSMFVKIKT LGIGAFGEVC LARKVDTKAL YATKTLRKKD VLLRNQVAHV bmy_02563T0/1-1107 DKSMFVKIKT LGIGAFGEVC LARKVDTKAL YATKTLRKKD VLLRNQVAHV ENSTTRP00000005702/1-958 DKSMFVKIKT LGIGAFGEVC LARKVDTKAL YATKTLRKKD VLLRNQVAHV 751 800 ENSP00000437550/1-1130 KAERDILAEA DNEWVVRLYY SFQDKDNLYF VMDYIPGGDM MSLLIRMGIF ENSBTAP00000020062/1-1123 KAERDILAEA DNEWVVRLYY SFQDKDNLYF VMDYIPGGDM MSLLIRMGIF BACU017491/1-1127 KAERDILAEA DNEWVVRLYY SFQDKDNLYF VMDYIPGGDM MSLLIRMGIF bmy_02563T0/1-1107 KAERDILAEA DNEWVVRLYY SFQDKDNLYF VMDYIPGGDM MSLLIRMGIF ENSTTRP00000005702/1-958 KAERDILAEA DNEWVVRLYY SFQDKDNLYF VMDYIPGGDM MSLLIRMGIF 801 850 ENSP00000437550/1-1130 PESLARFYIA ELTCAVESVH KMGFIHRDIK PDNILIDRDG HIKLTDFGLC ENSBTAP00000020062/1-1123 PENLARFYIA ELTCAVESVH KMGFIHRDIK PDNILIDRDG HIKLTDFGLC BACU017491/1-1127 PENLARFYIA ELTCAVESVH KMGFIHRDIK PDNILIDRDG HIKLTDFGLC bmy_02563T0/1-1107 PENLARFYIA ELTCAVESVH KMGFIHRDIK PDNILIDRDG HIKLTDFGLC ENSTTRP00000005702/1-958 PENLARFYIA ELTCAVESVH KMGFIHRDIK PDNILIDRDG HIKLTDFGLC 851 900 ENSP00000437550/1-1130 TGFRWTHDSK YYQSGDHPRQ DSMDFSNEWG DPSSCRCGDR LKPLERRAAR ENSBTAP00000020062/1-1123 TGFRWTHDSK YYQSGDHPRQ DSMDFSNEWG DPSNCRCGDR LKPLERRAAR BACU017491/1-1127 TGFRWTHDSK YYQSGDHPRQ DSMDFSNEWG DPSNCRCGDR LKPLERRAAR bmy_02563T0/1-1107 TGFRWTHDSK YYQSGDHPRQ DSMDFSNEWG DPSNCRCGDR LKPLERRAAR ENSTTRP00000005702/1-958 TGFRWTHDSK YYQSGDHPRQ DSMDFSNEWG DPSNCRCGDR LKPLERRAAR 901 950 ENSP00000437550/1-1130 QHQRCLAHSL VGTPNYIAPE VLLRTGYTQL CDWWSVGVIL FEMLVGQPPF ENSBTAP00000020062/1-1123 QHQRCLAHSL VGTPNYIAPE VLLRTGYTQL CDWWSVGVIL FEMLVGQPPF BACU017491/1-1127 QHQRCLAHSL VGTPNYIAPE VLLRTGYTQL CDWWSVGVIL FEMLVGQPPF bmy_02563T0/1-1107 QHQRCLAHSL VGTPNYIAPE VLLRTGYTQL CDWWSVGVIL FEMLVGQPPF ENSTTRP00000005702/1-958 QHQRCLAHSL VGTPNYIAPE VLLRTGYTQL CDWWSVGVIL FEMLVGQPPF 951 1000 ENSP00000437550/1-1130 LAQTPLETQM KVINWQTSLH IPPQAKLSPE ASDLIIKLCR GPEDRLGKNG ENSBTAP00000020062/1-1123 LAQTPFETQV KVINWQTSLH IPPQAKLSPE ASDLIIKLCR GPEDRLGKNG BACU017491/1-1127 LAQTPFETQV KVINWQTSLH IPPQAKLSPE ASDLIIKLCR GPEDRLGKNG bmy_02563T0/1-1107 LAQTPFETQV KVINWQTSLH IPPQAKLSPE ASDLIIKLCR GPEDRLGKNG ENSTTRP00000005702/1-958 LAQTPFETQV K--------- ---------- ---------- ---------- 1001 1050 ENSP00000437550/1-1130 ADEIKAHPFF KTIDFSSDLR QQSASYIPKI THPTDTSNFD PVDPDKLWSD ENSBTAP00000020062/1-1123 ADEIKAHPFF KTIDFSSDLR QQSASYIPKI THPTDTSNFD PVDPDKLRSD BACU017491/1-1127 ADEIKAHPFF KTIDFSSDLR QQSASYIPKI THPTDTSNFD PVDPDKLRSD bmy_02563T0/1-1107 ADEIKAHPFF KTIDFSSDLR QQSASYIPKI THPTDTSNFD PVDPDKLRSD ENSTTRP00000005702/1-958 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000437550/1-1130 DNEEENVNDT LNGWYKNGKH PEHAFYEFTF RRFFDDNGYP YNYPKPIEYE ENSBTAP00000020062/1-1123 DNEEENVNDT LNGWYKNGKH PEHAFYEFTF RRFFDDNGYP YNYPKPIEYE BACU017491/1-1127 DNEEENVNDT LNGWYKNGKH PEHAFYEFTF RRFFDDNGYP YNYPKPIEYE bmy_02563T0/1-1107 DNEEENVNDT LNGWYKNGKH PEHAFYEFTF RRFFDDNGYP YNYPKPIEYE ENSTTRP00000005702/1-958 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000437550/1-1130 YINSQGSEQQ SDEDDQNTGS EIKNRDLVYV ENSBTAP00000020062/1-1123 YINSQGSEQQ SDEDDQHTGS EMKNRDLVYV BACU017491/1-1127 YINSQGSEQQ SDEDDQHTGS EIKNRDLVYV bmy_02563T0/1-1107 YINSQGSEQQ SDEDDQHTGS EIKNRDLVYV ENSTTRP00000005702/1-958 ---------- ---------- ----------