KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:10:11 2014 Check: 00 .. Name: ENSTTRP00000001950/1-222 Len: 298 Check: 315 Weight: 1.00 Name: ENSP00000419378/1-236 Len: 298 Check: 3106 Weight: 1.00 Name: bmy_14832T0/1-225 Len: 298 Check: 4414 Weight: 1.00 Name: ENSBTAP00000020075/1-237 Len: 298 Check: 4069 Weight: 1.00 // 1 50 ENSTTRP00000001950/1-222 ---------- ---------- ---------- ---------- ---------- ENSP00000419378/1-236 MAET-KLQLF VK-------- ---------- ---------- ---------- bmy_14832T0/1-225 MAETAKLQLF VKVPGWPGCG EVWGGLKGGS PRQGPHPLPC AGLRLSSRRP ENSBTAP00000020075/1-237 MAEAGKLQLF VK-------- ---------- ---------- ---------- 51 100 ENSTTRP00000001950/1-222 ---------- ---------- ---ASEDSES VGHRPSCQP- -TILLLKGVS ENSP00000419378/1-236 ---------- ---------- ---ASEDGES VGHCPSCQRL FMVLLLKGVP bmy_14832T0/1-225 RSGRPRGSRV CSLPRHPSTP PTQASEDGES VGHCPSCQRL FMVLLLKGVS ENSBTAP00000020075/1-237 ---------- ---------- ---ASEDGES VGHCPSCQRL FMILLLKGVP 101 150 ENSTTRP00000001950/1-222 FTLATVD-RR SPDVLKDFAP GSQLPVLLYD GDAKTDTLQT EEFLEEALGP ENSP00000419378/1-236 FTLTTVDTRR SPDVLKDFAP GSQLPILLYD SDAKTDTLQI EDFLEETLGP bmy_14832T0/1-225 FTLTTVDTRR SPDVLKDFAP GSQLPILLYE GDAKTDTLQI EEFLEETLGP ENSBTAP00000020075/1-237 FTLTTVDTRR SPEVLKDFAP GSQLPILLCD GDAKTDTLQI EEFLEETLGP 151 200 ENSTTRP00000001950/1-222 PKFPSLEPRY RESTAAGNDV FHKFSAFIKN PVPALDNALY QHLLCALAKL ENSP00000419378/1-236 PDFPSLAPRY RESNTAGNDV FHKFSAFIKN PVPAQDEALY QQLLRALARL bmy_14832T0/1-225 PEFPSLAPRY RESTAAGNDV FRKFSAFIKN PVPALDDALY QHLLRALAKL ENSBTAP00000020075/1-237 PEFPSLAPRY RESTAAGNDV FHKFSAFIKN PVPAQDDALY QQLLRALAKL 201 250 ENSTTRP00000001950/1-222 DSYLRAPLEH ELAREPQLRE SRHRFVDGDQ LTLADCRLLP KLHIVNTVCA ENSP00000419378/1-236 DSYLRAPLEH ELAGEPQLRE SRRRFLDGDR LTLADCSLLP KLHIVDTVCA bmy_14832T0/1-225 DSYLRAPLEH ELAREPQLRE SRRRF----- ---------- ---------- ENSBTAP00000020075/1-237 DSYLRAPLEH ELGREPQLRE SRRRFLDGDQ LTLADCGLLP KLHVVNTVCA 251 300 ENSTTRP00000001950/1-222 HFRQAPIPSG LRGVRCYPDN ALQEKEFNYT CPHSAEILAA YRPAVRPR ENSP00000419378/1-236 HFRQAPIPAE LRGVRRYLDS AMQEKEFKYT CPHSAEILAA YRPAVHPR bmy_14832T0/1-225 ---------- ---------- ---------- ---------- -------- ENSBTAP00000020075/1-237 HFRQAPIPAE LRGLRRYLDC ALQEKEFKYT CPHSAEILAA YRPVVRPR