KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:11 2014 Check: 00 .. Name: ENSP00000355995/1-292 Len: 294 Check: 5314 Weight: 1.00 Name: ENSBTAP00000020078/1-292 Len: 294 Check: 1535 Weight: 1.00 Name: ENSTTRP00000001049/1-294 Len: 294 Check: 3538 Weight: 1.00 Name: bmy_12970T0/1-174 Len: 294 Check: 7778 Weight: 1.00 Name: BACU000015/1-294 Len: 294 Check: 3396 Weight: 1.00 // 1 50 ENSP00000355995/1-292 MAFMKKYLLP ILGLFMAYYY YSANEEFRPE MLQGKKVIVT GASKGIGREM ENSBTAP00000020078/1-292 MAFMKKYLLP ILGIFLAYYY YSANEEFRPE MLRGKRVIVT GASKGIGREM ENSTTRP00000001049/1-294 MAFMKKYLLP ILGIFLAYYY YSAKEEFRPE MLRGKRVIVT GASKGIGREM bmy_12970T0/1-174 MAFMKKYLLP ILGIFLAYYY YSAKEEFRPE MLRGKRVIVT GASKGIGREM BACU000015/1-294 MAFMKKYLLP ILGIFLAYYY YSAKEEFRPE MLRGKRVIVT GASKGIGREM 51 100 ENSP00000355995/1-292 AYHLAKMGAH VVVTARSKET LQKVVSHCLE LGAASAHYIA GTMEDMTFAE ENSBTAP00000020078/1-292 AYHLARMGAH VVVTARSEES LKKVVSRCLE LGAASAHYVA GTMENMTFAE ENSTTRP00000001049/1-294 AYHLARMGAH VVVTARSEEA LKKVVSHCLE LGASSAHYVA GTMENMTFAE bmy_12970T0/1-174 AYHLARMGAH VVVTARSEEA LKKVVSHCLE LGASSAHYVA GTMENMTFAE BACU000015/1-294 AYHLARMGAH VVVTARSEEA LKKVVSHCLE LGASSAHYVA GTMENMTFAE 101 150 ENSP00000355995/1-292 QFVAQAGKLM GGLDMLILNH ITNT--SLNL FHDDIHHVRK SMEVNFLSYV ENSBTAP00000020078/1-292 QFVAKAGELV GGLDMLILNH IHYT--PLGV FSNDIHLLRR TLEVNLLSYV ENSTTRP00000001049/1-294 QFVAKAGKLM GGLDMLILNH ITNTNNPMTV FIDDIDHVRK SMEVNFLSYV bmy_12970T0/1-174 EFVAKAGKLM GGLDMLILNH ITNTNNPMTV FIDDIDQVRK NMEVNFLSYV BACU000015/1-294 EFVAKAGKLM GGLDMLILNH ITNTNNPMTV FIDDIDQVRK NMEVNFLSYV 151 200 ENSP00000355995/1-292 VLTVAALPML KQSNGSIVVV SSLAGKVAYP MVAAYSASKF ALDGFFSSIR ENSBTAP00000020078/1-292 VLSTAALPML KQTNGSIVVV SSIAGKIACP LVAAYSASKF ALDGFFSSLR ENSTTRP00000001049/1-294 VLSGAAMPML KQSNGSIVVV SSIAGKTANP LIAAYSASKF ALDGFFSSIR bmy_12970T0/1-174 VLSGAAMPML KQSNGSIVVV SSIA------ ---------- ---------- BACU000015/1-294 VLSGAAMPML KQSNGSIVVV SSIAGKTANP LIAAYSASKF ALDGFFSSVR 201 250 ENSP00000355995/1-292 KEYSVSRVNV SITLCVLGLI DTETAMKAVS GIVHMQAAPK EECALEIIKG ENSBTAP00000020078/1-292 MEYEATKVNV SITLCILGLI DTDTAMKAVA GIFNAKASPK EECALEIIKG ENSTTRP00000001049/1-294 VEYAVTNVNV SITLCILGLI DTETAMTGTA GIYNAEASPK EECALEIIKG bmy_12970T0/1-174 ---------- ---------- ---------- ---------- ---------- BACU000015/1-294 VEYAVTNVNV SITLCILGLI DTETAMTGTA GIYNAEASPK EECALEIIKG 251 300 ENSP00000355995/1-292 GALRQEEVYY DSSLWTTLLI RNPCRKILEF LYSTSYNMDR FINK ENSBTAP00000020078/1-292 GTLRQDEVYY DSSILTPLLL RNPGRKIMEF FFLKKYNMER FINN ENSTTRP00000001049/1-294 GALRQKEVYY DSSVLTPFLL GNPGRKIMEF LSLRNYNMEI FINN bmy_12970T0/1-174 ---------- ---------- ---------- ---------- ---- BACU000015/1-294 GALRQKEVYY DSSVLTPFLL GNPGRKILEF LSLRNYNMEI FINN