KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:11 2014 Check: 00 .. Name: ENSP00000337972/1-605 Len: 955 Check: 6829 Weight: 1.00 Name: ENSBTAP00000020079/1-610 Len: 955 Check: 8802 Weight: 1.00 Name: bmy_01313T0/1-507 Len: 955 Check: 6154 Weight: 1.00 Name: BACU015935/1-938 Len: 955 Check: 9563 Weight: 1.00 Name: ENSTTRP00000005544/1-565 Len: 955 Check: 1804 Weight: 1.00 // 1 50 ENSP00000337972/1-605 MVRHQPLQYY EPQLCLSCLT GIYGCRWKRY QRSHDDTTPW ERLWFLLLTF ENSBTAP00000020079/1-610 MVRHQPLQYY EPQLCLSCLT GIYGCRWKRY QRSHDDTTPW ERLWFLLLTF bmy_01313T0/1-507 ---------- ---------- ---------- -------THW GPL------- BACU015935/1-938 MVRHQPLQYY EPQLCLSCLT GIYGCRWKRY QRSHDDTTPW ERLWFLLLTF ENSTTRP00000005544/1-565 ---------- ---------- ---------- ---------W ERLWFLLLTL 51 100 ENSP00000337972/1-605 TFGLTLTWLY FWWEVHNDYD EFNWYLYNRM GYWSDWPVPI LVTTAAAFAY ENSBTAP00000020079/1-610 TFGLTLTWLY FWWEVHNDYD EFNWYLYNRM GYWSDWSVPI LMTTAAAFTY bmy_01313T0/1-507 ---------- ---------- ---------- GRWGS----- ---------- BACU015935/1-938 TFGLTLTWLY FWWEVHNDYD EFNWYLYNRT GSWSDWSVPI LMTTAAAFTY ENSTTRP00000005544/1-565 TFGLTLTWLY FWWEVHNDYD EFNWYLYNRT GYWSDWSVPI LMTTAAAFTY 101 150 ENSP00000337972/1-605 IAGLLVLALC HIAVGQQMNL HWL--HKIGL VVILASTVVA MSAVAQLWED ENSBTAP00000020079/1-610 IAGLQVLALC HIAVGQQMNL HWL--HKIGL VAILVATVVA MSAVAQLWED bmy_01313T0/1-507 ---------- ----DAALTL WWLFPFQIGL VVILVATVVA MSAVAQLWED BACU015935/1-938 VAGLQVLALC HIAVGQQMNL HWL--HKIGL VVILVATVVA MSAVAQLWED ENSTTRP00000005544/1-565 VAGLQVLALC HIAVGQQMNL HWL--HKMGL VAILVATVVA MSAVAQLWED 151 200 ENSP00000337972/1-605 EWEVLLISLQ ---------- GTAPFLHVGA VAAVTMLSWI VAGQFARAER ENSBTAP00000020079/1-610 EWEVLLISLQ ---------- GTAPFLHVGA LVAITALSWI VAGQFARAER bmy_01313T0/1-507 EWEVLLISLQ QSLLPLPAHK GTAPFLHVGA LVAVTALSWI VAGQFARAER BACU015935/1-938 EWEVLLISLQ ---------- GTAPFLHMGA LVAVTALSWI VAGQFARAER ENSTTRP00000005544/1-565 EWEVLLISLQ ---------- GTAPFLHMGA LVAITALSWI VAGQFARAER 201 250 ENSP00000337972/1-605 TSSQVTILCT FFTVVFALYL APLTISSPCI MEKKDLGPKP ALIGHRGAPM ENSBTAP00000020079/1-610 SSSQIAILGT FFTVVFALYL APLTISSPCI MEKKDLGPKP ALIGHRGAPM bmy_01313T0/1-507 SSSQMAILST FFTVVFALYL APLTISSPCI MEKKDLGPKP ALIGHRGAPM BACU015935/1-938 SSSQMAILST FFTVVFALYL APLTISSPCI MEKKDLGPKP ALIGHRGAPM ENSTTRP00000005544/1-565 SSSQMAILGT FFTVVFALYL APLTISSPCI MEKKDLGPKP ALIGHRGAPM 251 300 ENSP00000337972/1-605 LAPEHTLMSF RKALEQKLYG LQADITISLD GVPFLMHDTT LRRTTNVEEE ENSBTAP00000020079/1-610 LAPEHTLMSF RKALEQKLYG LQADVTISLD GVPFLMHDAT LRRTTNVEEE bmy_01313T0/1-507 LAPEHTLMSF RKALEQKLYG LQADVTISLD GVPFLMHDTT LRRTTNVEEE BACU015935/1-938 LAPEHTLMSF RKALEQKLYG LQADVTISLD GVPFLMHDAT LRRTTNVEEE ENSTTRP00000005544/1-565 LAPEHTLMSF RKALEQKLYG LQADVTISLH GVPFLMHDAT LRRTTNV-TE 301 350 ENSP00000337972/1-605 FPELARRPAS MLNWTTLQRL NAGQWFLKTD PFWTASSLSP SDHREAQNQS ENSBTAP00000020079/1-610 FPELARRPAS MLNWTILQRL NAGQWFLKTD PFWTASSLSP SDHREAQNQS bmy_01313T0/1-507 FPELARRPAS MLNWTLLQRL NAGQWFLKTD PFWTASSLSP SDHREAQNQS BACU015935/1-938 FPELARRPAS MLNWTLLQRL NAGQWFLKTD PFWTASSLSP SDHREAQNQS ENSTTRP00000005544/1-565 FSELAHRPAS MLNCTLLQRL NAGQXXXXTD PFWTASSLSP SDHREAQNQS 351 400 ENSP00000337972/1-605 ICSLAELLEL AKGNATLLLN LRDPPREHPY RSSFINVTLE AVLHSGFPQH ENSBTAP00000020079/1-610 ICRLVELLEL AKGNATLLLN LRDPPREHPY RSSFLNITLE ALLSSGFPQH bmy_01313T0/1-507 ICSLMELLEL AKGNATLLLN LRDPPREHPY RGSFLNVTLE ALLRSGFPQH BACU015935/1-938 ICSLMELLEL AKGNATLLLN LRDPPREHPY RGSFLNVTLE ALLRSGFPQH ENSTTRP00000005544/1-565 ICSLMELLEL AKGNATLLLN LRDPPREHPY RGSFLNVTLE AVLHSGFPQH 401 450 ENSP00000337972/1-605 QVMWLPSRQR PLVRKVAPGF QQTSGSKEAV ASLRRGHIQR LNLRYTQVSR ENSBTAP00000020079/1-610 QVLWLPNRQR PLVRKVAPGF QQMSGSKEAA ASLRRGHIQR LNLRYTQVSR bmy_01313T0/1-507 QV-------R PCSPKVAPGF QQTSGSKEAA ASLRRGHIQW LNLRYTQVSR BACU015935/1-938 QVLWLPDRQR PFVQKVAPGF QQTSGSKEAA ASLRRGHIQR LNLRYTQVSR ENSTTRP00000005544/1-565 QVLWLPNRQR PFVQKVAPGF QQTSGSKEAA ASLRRGHIQR LNLRYTQVSR 451 500 ENSP00000337972/1-605 QELRDYASWN LSVNLYTVNA PWLFSLLWCA GVPSVTSDNS HALSQVPSPL ENSBTAP00000020079/1-610 QELRDYASWN LSVNLYTVNA PWLFSLLWCA GVPSVTSDNS HTLSQVPSPL bmy_01313T0/1-507 QELRDYASWN LSVNLYTVNA PWLFSLLWCA GVPSVTSDNS HTLSQVPSPL BACU015935/1-938 QELRDYASWN LSVNLYTVNA PWLFSLLWCA GVPSVTSDNS HTLSQVPSPL ENSTTRP00000005544/1-565 QELRDYASWN LSVNLYTVNA PWLFSLLWCA GVPSVTSDNS HTLSQVPSPL 501 550 ENSP00000337972/1-605 WIMPPDEYCL MWVTADLVSF TLIVGIFVLQ -----KWRLG GIRSYNPEQI ENSBTAP00000020079/1-610 WIMPPDEYCL LWVTADLISF TLIVGIFVLQ NYHLIRWRLG GIRSYNPEQI bmy_01313T0/1-507 WIMPPDEYCL MWVTADLISF ILIVGIFVLQ -----KWRLG GIRSYNPEQI BACU015935/1-938 WIMPPDEYCL MWVTADLISF ILIVGIFVLQ -----KWRLG GIRSYNPEQI ENSTTRP00000005544/1-565 WIMPPDEYCL MWVTADLISF ILIVGIFVLQ -----KWRLG GIRSYNPEQI 551 600 ENSP00000337972/1-605 MLSAAVRRTS RDVSIMKEKL IFSEISDGVE VSDVLSVCSD NSYDTYANST ENSBTAP00000020079/1-610 MLSAAVHRTS RDVSIMKEKL IFSEISDGME VSDELSVCSD NSYDSYANSA bmy_01313T0/1-507 MLSAAVHRTS RDVSIMKEKL IFSEISDGME VSDELSVCSD NSYDTYANST BACU015935/1-938 MLSAAVHRTS RDVSIMKEKL IFSEISDGME VSDELSVCSD NSYDTYANST ENSTTRP00000005544/1-565 MLSAAVHRTS RDVSIMKEKL IFSEISDGME VSDELSVCSD NSYDTYANST 601 650 ENSP00000337972/1-605 ATPVGPRGGG SHTKTLIERS ---------- ---------- ---------- ENSBTAP00000020079/1-610 TTPVAPRGSG SRAKTLTDRS ---------- ---------- ---------- bmy_01313T0/1-507 TSPMGPQGSG SHATTLTDRS ---------- ---------- ---------- BACU015935/1-938 TSPMGPQGSG SRATTLTERK AANEQTPAYG AASLWLQASP ELPRSLPTPT ENSTTRP00000005544/1-565 TSPTGPQGSG SRATTLTDRS ---------- ---------- ---------- 651 700 ENSP00000337972/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020079/1-610 ---------- ---------- ---------- ---------- ---------- bmy_01313T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU015935/1-938 RLAQYHHAHF TVPPPRFMDL AEVIVVIGGC DRKGLLKLPF ANAYHPDSRR ENSTTRP00000005544/1-565 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000337972/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020079/1-610 ---------- ---------- ---------- ---------- ---------- bmy_01313T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU015935/1-938 WTPLPGMPGF ARSEFATCTL RNDIYVSGGH INSRDVWMFS SHLHTWIKVA ENSTTRP00000005544/1-565 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000337972/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020079/1-610 ---------- ---------- ---------- ---------- ---------- bmy_01313T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU015935/1-938 SLHKGRWRHK MAVVQGQLFV VGGFDGLQRL CSVERYDPFS NTWAAAAPLP ENSTTRP00000005544/1-565 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000337972/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020079/1-610 ---------- ---------- ---------- ---------- ---------- bmy_01313T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU015935/1-938 EAVSSAAVAP CAGRLYVMGG AGRDGVSTNK VQCFDPKEDR WSLRSPAPFS ENSTTRP00000005544/1-565 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000337972/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020079/1-610 ---------- ---------- ---------- ---------- ---------- bmy_01313T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU015935/1-938 QRCLEAVSLE DTIYVVGGLM SKIFTYNPGM DVWGEAAVLP SPVESCGVTV ENSTTRP00000005544/1-565 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000337972/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020079/1-610 ---------- ---------- ---------- ---------- ---------- bmy_01313T0/1-507 ---------- ---------- ---------- ---------- ---------- BACU015935/1-938 CDGKVHILGG RDDHGESTDR IFTFDPSSGQ VEAQPSLQRC TSSHGCVTIV ENSTTRP00000005544/1-565 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000337972/1-605 ---GR ENSBTAP00000020079/1-610 ---GR bmy_01313T0/1-507 ---GR BACU015935/1-938 QSLGR ENSTTRP00000005544/1-565 ---GR