KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:10:12 2014  Check: 00 ..

 Name: bmy_21511T0/1-117         Len:    138  Check:  3133  Weight:  1.00
 Name: ENSP00000215909/1-135     Len:    138  Check:  5017  Weight:  1.00
 Name: ENSBTAP00000020080/1-135  Len:    138  Check:  5409  Weight:  1.00
 Name: BACU000841/1-135          Len:    138  Check:  6566  Weight:  1.00
 Name: ENSTTRP00000004518/1-135  Len:    138  Check:  5589  Weight:  1.00

//


                          1                                                   50
bmy_21511T0/1-117         MACGLVISNL NLKSGKYLRV LGKVALDAKS FVLNLGKDGN NLCLHFKPRF 
ENSP00000215909/1-135     MACGLVASNL NLKPGECLRV RGEVAPDAKS FVLNLGKDSN NLCLHFNPRF 
ENSBTAP00000020080/1-135  MACGLVASNL NLKPGECLRV RGEVAADAKS FLLNLGKDDN NLCLHFNPRF 
BACU000841/1-135          MACGLVASNL NLKPGECLRV RGEVPPDAKS FVLNLGKDGN NLCLHFNPRF 
ENSTTRP00000004518/1-135  MACGLVASNL NLKPGECLRV RGEVPPDAKS FVLNMGKDGN NLCLHFNPRF 


                          51                                                 100
bmy_21511T0/1-117         NEHRDTSTIV CNSKDGGAWG PKQQESVFPF QPGSVVEYAE SLKPT----- 
ENSP00000215909/1-135     NAHGDANTIV CNSKDGGAWG TEQREAVFPF QPGSVAEVCI TFDQANLTVK 
ENSBTAP00000020080/1-135  NAHGDVNTIV CNSKDAGAWG AEQRESAFPF QPGSVVEVCI SFNQTDLTIK 
BACU000841/1-135          NAHGDTNTIV CNSKDDGAWG AEQRESVFPF QPGSVVEVCV SFDQADLTIQ 
ENSTTRP00000004518/1-135  DAHGDTNTIV CNSKDGGAWG AEQRESVFPF QPGSVVEVCI SFDQADLTIQ 


                          101                                                150
bmy_21511T0/1-117         ----YKQQY- ---------- -ALLDSYEVL ILSFALKF 
ENSP00000215909/1-135     LPDGYEFKFP NRLNLEAINY MAADGDFKIK CVAFD--- 
ENSBTAP00000020080/1-135  LPDGYEFKFP NRLNLEAINY LSAGGDFKIK CVAFE--- 
BACU000841/1-135          LPGGYDFKFP NRLNLEAINY LAANGDFKIK CVAFE--- 
ENSTTRP00000004518/1-135  LPGGYDFKFP NRLNLEAINY LAADGDFKIK CVAFE---