KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:14 2014 Check: 00 .. Name: ENSP00000451131/1-1886 Len: 1886 Check: 8455 Weight: 1.00 Name: ENSTTRP00000012392/1-617 Len: 1886 Check: 8391 Weight: 1.00 Name: ENSBTAP00000020088/1-617 Len: 1886 Check: 8258 Weight: 1.00 Name: bmy_03857T0/1-571 Len: 1886 Check: 1763 Weight: 1.00 Name: BACU007377/1-572 Len: 1886 Check: 535 Weight: 1.00 // 1 50 ENSP00000451131/1-1886 MSTIPRHFGL KYKEESYMFK ELEKVRQETK KDFLRFKQKL ASKPAVDESP ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000451131/1-1886 VHSLHAPGPA RPARVSCAAA RTSRRYPSLK GPAMSAAALL QEVLGGAPRP ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000451131/1-1886 SGLGEAAAPG KTRSFRPRDF YLRSSAFLRH QALKKPPVIA SGFGTARPVV ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000451131/1-1886 LLPPPEPPVK RRARGVLESS RHAAPRRVFH LGREREQSQE VAPLAGPCMA ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000451131/1-1886 KERKASSVSA EDGYMEASSG RRKVRIRSNF VSESGAREAR EAAGLGAQGE ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000451131/1-1886 QESWPPSDAR EAAWQALLPS RVIPTSIEEI IASLQSEAQL ASDQTIKELI ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000451131/1-1886 RSVLGQNYDI TMEDISLMGK MYLKTSPMQA ETPEIQAEYK FQMGAEESQM ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000451131/1-1886 SVHKELSETM SSILQIEQED IEWGPSEAES IVFKPQEISQ VQPAEELSKP ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000451131/1-1886 LEDGQPTSDS KEAKWVSLTA KSPEFLQIEG KEIKRMRKRK SLRPRKSSKP ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000451131/1-1886 LCDKKLHKKI PQDYSMPHLH DLCTTIPAQE LPVDLRLASR VYHTANRKGH ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000451131/1-1886 DTLLGKFGTS FLDDRFTDEE QTDRILYGIP VMDDNQEYVH IPPTPQGIPP ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000451131/1-1886 ELAQGTRERA HKPHLEVLGE EMYAYPEFTK LFWNTAAPKF SVPESVMKET ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000451131/1-1886 LYPKYESVQA SRLLTDKLSY KSSVITLHQH SRTNFWCFLP RKSASFESIQ ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000451131/1-1886 KWFSAQPTQL RRVKSSVDLR KEKIIAPLEI KNDMQSSIKE VMFQKAKELK ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000451131/1-1886 RQLQLTKQNK TEEPNYVKES IDDIFDNMCE KHSLRNLSLT LIEASKKAGI ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000451131/1-1886 SYIVYPKKKK MRWKKRLKQQ KLIFVHEELS KPPKSLERSA SHGILPGQKK ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000451131/1-1886 YLFKVPLYER QIRCPSLPLY LNFEKFVQAK GGIPENIDPR TWALDRLIEY ENSTTRP00000012392/1-617 ---------- RMKC------ ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- RMRC------ ---------- ---------- ---------- bmy_03857T0/1-571 ---------- -MKC------ ---------- ---------- ---------- BACU007377/1-572 ---------- RMKC------ ---------- ---------- ---------- 851 900 ENSP00000451131/1-1886 KDASIPVKEK DDKISVPEDP PERVKEPPKL KLNDYVESDL PQEVIKYYES ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000451131/1-1886 EVKILTEEIN DKTKYPAFAY CRRGAIYRKL GKLQSAMNDL QRVILLEPLF ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000451131/1-1886 LNAYWHRHLI YLFQDKINEA LDDLNYIHKY NKNNTEAYLS KAEIYRGKKD ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSP00000451131/1-1886 ITLAILNYTQ AIKSTPTDAD IYFRRGEMYE ITNKVLAIDD FSKCIFYDPK ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSP00000451131/1-1886 RTDALLKRGL FYCENENWFA AIEDFTALLN IDHQNSQART YRGIAYVKWK ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000451131/1-1886 FYKEATQDFS AAIHLDPNNW LALYYRGCLF RKSNPFRALQ DYSVSALIND ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 1151 1200 ENSP00000451131/1-1886 GYENLGCFLH RGIVYAHLKL WLLAICDFET VISLERTITL AYVNIGLIHL ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSP00000451131/1-1886 LHLDNYTEAI WQFSEAIRID PLCIQSYLCR AETYFKLHKL KKAVNELSRA ENSTTRP00000012392/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020088/1-617 ---------- ---------- ---------- ---------- ---------- bmy_03857T0/1-571 ---------- ---------- ---------- ---------- ---------- BACU007377/1-572 ---------- ---------- ---------- ---------- ---------- 1251 1300 ENSP00000451131/1-1886 IHLQPDGIQL YIRRGQYLLM MKYYDLAKFT IYQIAEMDKG LSELSPMQQA ENSTTRP00000012392/1-617 ---------- ---------- ---YGLAKFT IYQVAEMTKX XXXXXXXXXX ENSBTAP00000020088/1-617 ---------- ---------- ---YDLAKFT IYQVAELNKG LIELSPIQQA bmy_03857T0/1-571 ---------- ---------- ---YDLAKFT IYQVAEMTEG LIELSPIQQA BACU007377/1-572 ---------- ---------- ---YDLAKFT IYQVAEMTEG LIELSPIQQA 1301 1350 ENSP00000451131/1-1886 LIYSFCENHD KAIEVLDGIS WNRAEMTMCA LLAKVQMKAK RTKEAVEVLK ENSTTRP00000012392/1-617 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXEAMRMFK ENSBTAP00000020088/1-617 LIYSFCENHD KAIQVLDGIT LNKPDVPMCT LLAKAQMKAK RNKEAMRMFK bmy_03857T0/1-571 LIYSFCENHD KAIQVLDGIT LNKPEVTMYA LLAKAQMKAK RNK------- BACU007377/1-572 LIYSFCENHD KAIQVLDGIT SNKPEVTMYA LLAKAQMKAK RNK------- 1351 1400 ENSP00000451131/1-1886 KALDAISHSD KGPDATAISA DCLYNLGLCY MEEGNLQMAF DSFTKAVKAN ENSTTRP00000012392/1-617 KALDIFSHSD KGRNAVAASS DCLFHLGLCY MEEGNLQLAF DSFTKAVKAD ENSBTAP00000020088/1-617 KALDLISSSD KGLNPLAASA DCLYHLGLCY MEEGSLQLAF DSFTKAVKAN bmy_03857T0/1-571 ---------- ---------- ---------- --------AF DSFTKAVKAD BACU007377/1-572 ---------- ---------- ---------- --------AL DSFTKAVKAD 1401 1450 ENSP00000451131/1-1886 PDFAESFYQR GLCKVKLHKD SSILDFNRAI TLNPKHYQAY LSRVAFYGLK ENSTTRP00000012392/1-617 PDFAEGFYQR GLCKVKLHKD CSILDFNRAI TLDPKHYQAY LSRVAYYGLK ENSBTAP00000020088/1-617 PDFAESFYHR GLCKVKLHKS GSILDFNRAI TLDPKHYQAY LSRVAYYGLK bmy_03857T0/1-571 PDFAEGFYQR GLCKVKLHKD SSILDFNRAI TLDPKHYQAY LSRVAYYGLK BACU007377/1-572 PDFAEGFYQR GLCKVKLHKD SSILDFNRAI TLNPKHYQAY LSRVAYYGLK 1451 1500 ENSP00000451131/1-1886 GRYSKAILNC NKAIKIYPES VRAYLYRGVL KYYNKTYKLA ITDLTTAISM ENSTTRP00000012392/1-617 GRYSKAILSC NEAIQIYPQS VRAYLYRGVL KYYNKTYKLA ITDLTTAINM ENSBTAP00000020088/1-617 GRYSKAILSC NEAIKIYPQS VRAYVYRGVL KYYSRNYKLA ITDLTTAINM bmy_03857T0/1-571 GRYSKAILSC NEAIKIYPQS VCAYVYRGVL KYYNKTYKLA ITDLTTAINM BACU007377/1-572 GRYSKAILSC NEAIKIYPQS VRAYIYRGVL KYYNKTYKLA ITDLTTAINM 1501 1550 ENSP00000451131/1-1886 DKNSYTAFYN RALCYTKIRE LQMALTDYGI VLLLDATETV KLNTFLNRGL ENSTTRP00000012392/1-617 DKNSYIAFYN RALCYTKINE LQMALTDYGI VLLLDAGETV MLNAFINRGL ENSBTAP00000020088/1-617 DKNSYIAFYN RALCYTKINE LQMALTDYGI VLLLNAGETV TLNTFINRGL bmy_03857T0/1-571 DKNSYIAFYN RALCYTKINE LQMALTDYGI VLLLDAGETV TLNAFINRGL BACU007377/1-572 DKNSYIAFYN RALCYTKINE LQMALTDYGI VLLLDAGETV TLNAFINRGL 1551 1600 ENSP00000451131/1-1886 IYVELGQYGF ALEDFKQAAL ISRTNGSLCH ATAMCHHRIN EFEEAVNFFT ENSTTRP00000012392/1-617 IYTELEQFSF ALEDFKQAAL ISKTNVSLCQ ATAMCYHRNK EFEEAVNFFT ENSBTAP00000020088/1-617 IYAELEQFNF ALEDFKQAAL ISKTNVSLCQ ATAVCYHRNK EFEEAVNFFT bmy_03857T0/1-571 IYTELEQFSF ALEDFKQAAL ISKTNVSLCQ ATAICYHRNK EFEEAVNFFT BACU007377/1-572 IYTELEQFGF ALEDFKQAAL ISKTNVSLCQ ATAICYHRNK EFEEAVNFFT 1601 1650 ENSP00000451131/1-1886 WALKINPCFL DAYVGRGNSY MEYGHDEATK QAQKDFLKAL HINPAYIKAR ENSTTRP00000012392/1-617 WAVKIDPYFL DAYIGRGNSY MEYGHDEAIR QAQKEFLKAL HFNPVYTKAR ENSBTAP00000020088/1-617 WAVKIDPRFL DAYIGRGNSY MEYGHDEATK QAQKDFLKAL HFNPVYTKAR bmy_03857T0/1-571 WAVKIDPCFL DAYIGRGNSY MEYGHDEAIK QAQKDFLKAL HFNPVYTKAR BACU007377/1-572 WAVKIDPCFL DAYIGRGNSY TEYGHDEAIK QAQKDFLKAL HFNPVCTKAR 1651 1700 ENSP00000451131/1-1886 ISFGYNLQAQ GKFQKAWNHF TIAIDTDPKN YLAYEGRAVV CLQMGNNFAA ENSTTRP00000012392/1-617 ICLGYNLQAQ GKFQKAWNHF TIAIEVDPKS YLAYEGRAVV SLQMGDNFAA ENSBTAP00000020088/1-617 ICLGYNLQAQ GKFQKAWNHF TIAMEVDPKS YLAYEGRAVV CLQMGDNFAA bmy_03857T0/1-571 ICLGYNLQAQ GKFQKAWNHF TIAIEVDPKS YLAYEGRAVV SLQMGDNFAA BACU007377/1-572 ICLGYNLQAQ GKFQKAWNHF TIAIEVDPKS YLAYEGRAVV SLQMGDNFAA 1701 1750 ENSP00000451131/1-1886 MQDINAAMKI STTAEFLTNR GVIHEFMGHK QNAMKDYQDA ITLNPKYSLA ENSTTRP00000012392/1-617 IQDINAAIKI NTRAEFLTNR GVIHEFMGQQ QNAMRDYQAA ISLNPTYSLA ENSBTAP00000020088/1-617 FQDINAAIKI NATAEFLTNR GVIHEFMGQQ QNAMRDYQEA ISLNPTYSLA bmy_03857T0/1-571 IQDINAAMKI NTRAEFLTNR GVIHEFMGQQ QNAMRDYQAA ISLNPTYSLA BACU007377/1-572 IQDINAAIKI NTRAEFLTNR GVIHEFMGQQ QNAMRDYQAA ISLNPTYSLA 1751 1800 ENSP00000451131/1-1886 YFNAGNIYFH HRQFSQASDY FSKALKFDPE NEYVLMNRAI TNTILKKYEE ENSTTRP00000012392/1-617 YFNAGNIYFH HRQFSQAIDY FSKALKFDPE NECATMNRAI ANTVLKRYEE ENSBTAP00000020088/1-617 YFNAGNIYFH HRQFSQASDY FSKALKFDPE NECATMNRAI ANTVLKRYEE bmy_03857T0/1-571 YFNAGNIYFH HRQFSQASDY FSKALKFDPE NECATMNRAI ANTVLKRYEE BACU007377/1-572 YFNAGNIYFH HRQFSQASDY FSKALKFDPE NECATMNRAI ANTVLKRYEE 1801 1850 ENSP00000451131/1-1886 AKEDFANVIE SCPFWAAVYF NRAHFYYCLK QYELAEEDLN KALSLKPNDA ENSTTRP00000012392/1-617 AKEDFARVVE SCPFWAAVYF NRAYFYCCLK QYELAEEDLS KALSLKPNDA ENSBTAP00000020088/1-617 AKEDFAYVVE SCPLWAAVYF NRAYFYCCLK QYELAEEDLS KALSLKPNDA bmy_03857T0/1-571 AKEDFAYVVE SCPFWAAVYF NRAYFYCCLK QYELAEEDLS KALSLKPNDA BACU007377/1-572 AKEDFAYVVE SCPFWAAVYF NRAYFYCCLK QYELAEEDLS KALSLKPNDA 1851 1900 ENSP00000451131/1-1886 LVYNFRAKVR GKIGLIEEAM ADYNQALDLE DYASVI ENSTTRP00000012392/1-617 LVYNLRAEVR GKIGLIDEAV ADYNQALYLQ EHASVV ENSBTAP00000020088/1-617 LIYNLRAEVR GKIGLIEEAM ADYNKALDLQ EHASVV bmy_03857T0/1-571 LVYNLRAEVR GKIGLIEEAV ADYNQALDLQ EHASVV BACU007377/1-572 LVYNLRAEVR GKIGLVEEAV ADYNQALDLQ ERASVV