KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:10:15 2014 Check: 00 .. Name: bmy_14985T0/1-245 Len: 288 Check: 3193 Weight: 1.00 Name: ENSP00000362704/1-200 Len: 288 Check: 7750 Weight: 1.00 Name: ENSBTAP00000020099/1-200 Len: 288 Check: 9672 Weight: 1.00 Name: ENSTTRP00000009218/1-241 Len: 288 Check: 1000 Weight: 1.00 // 1 50 bmy_14985T0/1-245 MQITSCELSF HPFRSRIEGC CGGRREPPTE ASLQTPNLQG LRPSQHPMED ENSP00000362704/1-200 ---------- ---------- ---------- ---------- -------MDD ENSBTAP00000020099/1-200 ---------- ---------- ---------- ---------- -------MED ENSTTRP00000009218/1-241 ---------- ---------- ---------- ---------- -------MED 51 100 bmy_14985T0/1-245 KKKKRSPKPC LTQPAQPPGT LRRVPVPTSH SGSLALGLPH LPSPKQRAKF ENSP00000362704/1-200 KKKKRSPKPC LAQPAQAPGT LRRVPVPTSH SGSLALGLPH LPSPKQRAKF ENSBTAP00000020099/1-200 KKKKRSPKPC LTQPAQPPGT LRRVPVPTSH SGSLALGLPH LPSPKQRTKF ENSTTRP00000009218/1-241 KKKKRSPKPC LTQPAQPPGT LRRVPVPTSH SGSLALGLPH LPSPKQRAKF 101 150 bmy_14985T0/1-245 KRVGKEKCRP VLAGGGGGSA GTPLQHSFLT EVTDVYEMEG GLLNLLNDFH ENSP00000362704/1-200 KRVGKEKCRP VLAGGGSGSA GTPLQHSFLT EVTDVYEMEG GLLNLLNDFH ENSBTAP00000020099/1-200 KRVGKEKCRP VLAGGAGGSA GTPLQHSFLT EVTDVYEMEG GLLNLLNDFH ENSTTRP00000009218/1-241 KRVSKEKCRP VLAGGGGGSA GTPLQHSFLT EVTDVYEMEG GLLNLLNDFH 151 200 bmy_14985T0/1-245 SGRLQAFGKE CSFEQLEHVR EMQEKLARLH FSLDVCGEEE EEEEEEEDGV ENSP00000362704/1-200 SGRLQAFGKE CSFEQLEHVR EMQEKLARLH FSLDVCGE-E EDDEEEEDGV ENSBTAP00000020099/1-200 SGRLQAFGKE CSFEQLEHVR EMQEKLARLH FSLDVCGE-E EDEEEEDDGV ENSTTRP00000009218/1-241 SGRLQAFGKE CSFEQLEHVR EMQEKLARLH FSLDVCGEEE EEEEEEEDGV 201 250 bmy_14985T0/1-245 TEGLPEEQKK TMADRNLDQL LSNVG----- ---------- ---------- ENSP00000362704/1-200 TEGLPEEQKK TMADRNLDQL LSNLEDLSNS I--------- ---------- ENSBTAP00000020099/1-200 TDGLPEEQKK TMADRNLDQL LSNLEDLSNS I--------- ---------- ENSTTRP00000009218/1-241 TEGLPEEQKK TMADRNLDQL LSNLEDLSNS MYPFKGTQCV SVPEIKSASA 251 300 bmy_14985T0/1-245 -----QGWVL QFLGAPEGVW RGTCF----- -------- ENSP00000362704/1-200 -----QKLHL AENAEPEEQS AA-------- -------- ENSBTAP00000020099/1-200 -----QKLHL AENAEPEEPS AV-------- -------- ENSTTRP00000009218/1-241 SPTLQESLQI TNILTPFSPR ISHKFPLPRR VQKEFPKY