KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:16 2014 Check: 00 .. Name: ENSP00000441065/1-500 Len: 501 Check: 8849 Weight: 1.00 Name: ENSBTAP00000020102/1-501 Len: 501 Check: 636 Weight: 1.00 Name: ENSTTRP00000008498/1-500 Len: 501 Check: 7153 Weight: 1.00 Name: bmy_12071T0/1-496 Len: 501 Check: 5855 Weight: 1.00 Name: BACU002694/1-496 Len: 501 Check: 3297 Weight: 1.00 // 1 50 ENSP00000441065/1-500 MPPAVGGPVG YTPPDGGWGW AVVIGAFISI GFSYAFPKSI TVFFKEIEGI ENSBTAP00000020102/1-501 MPPAVGGPVG YTPPDGGWGW AVVIGAFISI GFSYAFPKSI TVFFKEIEGI ENSTTRP00000008498/1-500 MPPAVGGPVG YTPPDGGWGW AVVVGAFISI GFSYAFPKSI TVFFKEIEGI bmy_12071T0/1-496 MPPAVGGPVG YTPPDGGWGW AVVVGAFISI GFSYAFPKSI TVFFKEIEGI BACU002694/1-496 MPPAVGGPVG YTPPDGGWGW AVVVGAFISI GFSYAFPKSI TVFFKEIEGI 51 100 ENSP00000441065/1-500 FHATTSEVSW ISSIMLAVMY GGGPISSILV NKYGSRIVMI VGGCLSGCGL ENSBTAP00000020102/1-501 FNATTSEVSW ISSIMLAVMY GGGPISSVLV NKYGSRPVMI VGGILSGSGL ENSTTRP00000008498/1-500 FNATTSEVSW ISSIMLAVMY GGGPISSILV NKYGSRPIMI AGGCLSGCGL bmy_12071T0/1-496 FNATTSEVAW ISSIMLAVMY GGGPISSILV NKYGSRPIMI VGGCLSGCGL BACU002694/1-496 FNATTSEVSW ISSIMLAVMY GGGPISSILV NKYGSRPIMI VGGCLSGCGL 101 150 ENSP00000441065/1-500 IAASFCNTVQ QLYVCIGVIG GLGLAFNLNP ALTMIGKYFY KRRPLANGLA ENSBTAP00000020102/1-501 IAASFCNTVQ ELYFSVGVIG GLGLAFNLNP ALTMIGKYFY KRRPLANGLA ENSTTRP00000008498/1-500 IAASFCNTVQ ELYLCVGVIG GLGLAFNLNP ALTMIGKYFY KRRPLANGLA bmy_12071T0/1-496 IAASFCNTVQ ELYLCVGVIG GLGLAFNLNP ALTMIGKYFY KRRPLANGLA BACU002694/1-496 IAASFCNTVQ ELYLCVGVIG GLGLAFNLNP ALTMIGKYFY KRRPLANGLA 151 200 ENSP00000441065/1-500 MAGSPVFLCT LAPLNQVFFG IFGWRGSFLI LGGLLLNCCV AGALMRPIGP ENSBTAP00000020102/1-501 MAGSPVFLST LAPLNQAFFM IYGWRGSFLI LGGLLLNCCV AGALMRPIGP ENSTTRP00000008498/1-500 MAGSPVFLST LAPLNQAFFG IYGWRGSFLI LGGLLLNCCV AGALMRPIGP bmy_12071T0/1-496 MAGSPVFLST LAPLNQAFFG IYGWRGSFLI LGGLLLNCCV AGALMRPVGP BACU002694/1-496 MAGSPVFLST LAPLNQAFFG IYGWRGSFLI LGGLLLNCCV AGALMRPIGP 201 250 ENSP00000441065/1-500 KPTKAGKDKS KASLEKAGKS GVKKDLHDAN TDLIGRHPKQ EKRSVFQTIN ENSBTAP00000020102/1-501 KPTTAEKEKS KGSLQEAGKY ETKKGASDAN TDLIGGNPKE EKKSIFQTLN ENSTTRP00000008498/1-500 KPTTVERYMS KESLPEAGKS DAKKGASDAN TDLIGGNPKE EKRSVFQTLN bmy_12071T0/1-496 KPTTAGKYKS KESLQEA--- --KKGASDAN TDLIGGNPKE EKRSIFQTLN BACU002694/1-496 KPTTAGKYKS KESLQEA--- --KKGAGDAN TDLIGGNPKE EKRSVFQTLN 251 300 ENSP00000441065/1-500 QFLDLTLFTH RGFLLYLSGN VIMFFGLFAP LVFLSSYGKS QHYSSEKSAF ENSBTAP00000020102/1-501 TFLDLSLFKH RGFLLYLSGN VLMFFGLFTP LVFLSNYGKS KHYSSEKAAF ENSTTRP00000008498/1-500 KFLDLSLFKH RGFLLYLSGN VLMFFGLFTP LVFLSNYGKS QHYSSEKSAF bmy_12071T0/1-496 KFLDLSLFKH RGFLLYLSGN VLXFFGLFTP LVFLSNYGKS QHYSSEKSAF BACU002694/1-496 TFLDLSLFKH RGFLLYLSGN VLMFFGLFTP LVFLSNYGKS QHYSSEKSAF 301 350 ENSP00000441065/1-500 LLSILAFVDM VARPSMGLVA NTKPIRPRIQ YFFAASVVAN GVCHMLAPLS ENSBTAP00000020102/1-501 LLSILAFVDM VARPSMGLVA NTKWVRPRVQ YFFAASIIAN GLCHLAAPLS ENSTTRP00000008498/1-500 LLSILAFVDM VARPSMGLVA NTKWIRPRVQ YFFAASIIAN GVCHLAAPLS bmy_12071T0/1-496 LLSILAFVDM VARPSMGLVA NTKWIRPRVQ YFFAASXIAN GVCHLAAPLS BACU002694/1-496 LLSILAFVDM VARPSMGLVA NTKWIRPRVQ YFFAASIIAN GVCHLAAPLS 351 400 ENSP00000441065/1-500 TTYVGFCVYA GFFGFAFGWL SSVLFETLMD LVGPQRFSSA VGLVTIVECC ENSBTAP00000020102/1-501 STYIELCIYA GFFGFAFGWL SSVLFETLMD LVGPQRFSSA VGLVTIVECC ENSTTRP00000008498/1-500 SSYIGFCVYA GFFGFAFGWL SSVLFETLMD LVGPQRFSSA VGLVTIVECC bmy_12071T0/1-496 SSYIGFCVYA GFFGFAFGWL SSVLFETLMD LVGPQRFSSA VGLVTIVECC BACU002694/1-496 SSYIGFCVYA GFFGFAFGWL SSVLFETLMD LVGSQRFSSA VGLVTIVECC 401 450 ENSP00000441065/1-500 PVLLGPPLLG RLNDMYGDYK YTYWACGVVL IISGIYLFIG MGINYRLLAK ENSBTAP00000020102/1-501 PVLLGPPVLG RLNDIYGDYK YTYWACGIIL IVAGIYLFIG MGINYRLLEK ENSTTRP00000008498/1-500 PVLLGPPLLG RLNDIYGDYK YTYWACGIIL IVAGIYLFIG MGINYRLLAK bmy_12071T0/1-496 PVLLGPPLLG RLNDIYGDYK YTYWACGIIL IVAGIYLFIS MGINYQLLAK BACU002694/1-496 PVLLGPPLLG RLNDIYGDYK YTYWACGIIL IVAGIYLFIG MGINYQLLAK 451 500 ENSP00000441065/1-500 EQKAN-EQKK ESKEEETSID VAGKPNEVTK AAESPDQKDT DGGPKEEESP ENSBTAP00000020102/1-501 EQKAEKQQKK ESKDEETNVD VAEKPKEVID AAESPEHKAT EEDPKEAESP ENSTTRP00000008498/1-500 EQKAS-KQKK ESKEEETSID VAEKPKEVTD AAESLDPKGI EGGPKEEESP bmy_12071T0/1-496 EQKAGQQQKK ESKEEETSID VAEKPKEVTD AAESLEPZGI EGGPKEEESX BACU002694/1-496 EQKAEQQQKK ESKEEETSID VAEKPKEVTD AAESLEPKSI EGGPKEEESP 501 550 ENSP00000441065/1-500 V ENSBTAP00000020102/1-501 V ENSTTRP00000008498/1-500 V bmy_12071T0/1-496 V BACU002694/1-496 V