KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:25 2014 Check: 00 .. Name: ENSP00000321203/1-429 Len: 435 Check: 5751 Weight: 1.00 Name: ENSBTAP00000020124/1-336 Len: 435 Check: 6710 Weight: 1.00 Name: ENSTTRP00000011236/1-333 Len: 435 Check: 6200 Weight: 1.00 Name: bmy_05456T0/1-384 Len: 435 Check: 8936 Weight: 1.00 Name: BACU004132/1-318 Len: 435 Check: 5530 Weight: 1.00 // 1 50 ENSP00000321203/1-429 MSRDPGSGGW EEAPRAAAAL CTLYHEAGQR LRRLQDQLAA RDALIARLRA ENSBTAP00000020124/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011236/1-333 ---------- ---------- ---------- ---------- ---------- bmy_05456T0/1-384 ---------- ---------- ---------- ---------- ---------- BACU004132/1-318 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000321203/1-429 RLAALEGDAA PSLVDALLEQ VARFREQLRR QEGGAAEAQM RQEIERLTER ENSBTAP00000020124/1-336 ---------- ---------- ---------- ---------- --EIERLSEQ ENSTTRP00000011236/1-333 ---------- ---------- ---------- ---------- --EIERLSEQ bmy_05456T0/1-384 MSIPPVVTRP PQSCDAGRGR RVHGGPGICD TVEGGAPAAF STEIERLSEQ BACU004132/1-318 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000321203/1-429 LEEKEREMQQ LLSQPQHERE KEVVLLRRSM AEGERARAAS DVLCRSLANE ENSBTAP00000020124/1-336 LEEKEREAQQ LLSQPGLERE KEVALLRRSV AEKERARAAS HVLCRSLADE ENSTTRP00000011236/1-333 LEEKERETKQ LMSQPEREQ- KEVTLLRRGA AQKGRAPAAS DILCRSLADE bmy_05456T0/1-384 LEEKERETQQ LMSQPEREQE EEVALLRRSG AQKGRARAAS DILCRSLADE BACU004132/1-318 ---------- -MSQPEREQE KEVALLRRSA AQKGRARAAS DILCRSLADE 151 200 ENSP00000321203/1-429 THQLRRTLTA TAHMCQHLAK CLDERQHAQR NVGERSPDQS EHTDGHTSVQ ENSBTAP00000020124/1-336 THQLRRTLAA TAHMCQHLAK CLDERQGGQG TAGEQSPEPK -CTEGDASVH ENSTTRP00000011236/1-333 THQLRRTLAA TAHMCQHLAE CLDARQRAKG DAGERSPEPA -CADGDGSVH bmy_05456T0/1-384 THQLRRTLAA TSHMCQHLAK CLDERQRAQG DAGERSPEPA -CADGDGSVH BACU004132/1-318 THQLRRTLAA TAHMCQHLAK CLDERQRTQG DAGERSPEPA -CADGDGSVH 201 250 ENSP00000321203/1-429 SVIEKLQEEN RLLKQKVTHV EDLNAKWQRY NASRDEYVRG LHAQLRGLQI ENSBTAP00000020124/1-336 AVVEKLREEN RVLRQKVTHV EDLNARWQRY DASRDEYVRG LHAQLKGLQV ENSTTRP00000011236/1-333 AVVAKLQEEN RLLKQKVTHV EDLNAKWQRY DASRDEYVRG LHAQLRGLQA bmy_05456T0/1-384 AVVEKLREEN RLLKQKVTHV EDLNAKWQRY DASRDEYVRG LHAQLRGLQA BACU004132/1-318 TVVEKLREEN RLLKQKVTHV EDLNAKWQRY DASRDEYVRG LHAQLRGLQA 251 300 ENSP00000321203/1-429 PHE------P ELMRKEISRL NRQLEEKIND CAEVKQELAA SRTARDAALE ENSBTAP00000020124/1-336 PLE------P ELMRKEVSRL NAQLEEKMDD CAEARRELAA ARSARDAALE ENSTTRP00000011236/1-333 PLE------P ELMRKEISRL NTQLEEKIND CAEARRELEA VRRARDAALE bmy_05456T0/1-384 PLEAERPSPP ELMRKEISRL NTQLEEKIND CAEARRELAA ARRARDAALE BACU004132/1-318 PLEAERPSPP ELMRKEISRL NTQLEEKIND CAEARRELAA ARRARDAALE 301 350 ENSP00000321203/1-429 RVQMLEQQIL AYKDDFMSER ADRERAQSRI QELEEKVASL LHQVSWRQDS ENSBTAP00000020124/1-336 RVQMLEQQIL AYKDDFTSER ADRERAQSRI HELEEQVASL QRQASWRQDS ENSTTRP00000011236/1-333 RVQMLE-QIL AY-DDFTSER VDRERAXXXX XXXXXXXXXX XXXXXXXXDP bmy_05456T0/1-384 RVQLLEQQIL AYKDDFTSER VDRERAQSRI QELEERVALL QRQVPWKQDP BACU004132/1-318 RVQMLEQQIL AYKDDFTSER VDRERAQSRI QELEERVALL Q-----RQDP 351 400 ENSP00000321203/1-429 REPDAGRIHA GSKTAKYLAA DALELMVPGG WRPGTGSQQP EPPAEGGHPG ENSBTAP00000020124/1-336 REPVSCRIHT GSRSPRYLET DASEPVAAGG RRPGTGSQWL DLAAEGGCSG ENSTTRP00000011236/1-333 REPGSCRVHT GGKTPGYLET DASELVAPGG WRPGTGSQRP ELPAEAGSPG bmy_05456T0/1-384 REPGSCRIHT GGKTPGYLET DASELVAPGG WRPGMGSQRP ELPAEGGSPR BACU004132/1-318 REPGSCRIHT GGKTPGYLET GASELVAPGG CRPRMGSQRP ELPAEGGSPG 401 450 ENSP00000321203/1-429 AAQRGQGDLQ CPHCLQCFSD EQGEELLRHV AECCQ ENSBTAP00000020124/1-336 VTQRGQGDLQ CPHCLRCFSD EQGEELFKHV AECCQ ENSTTRP00000011236/1-333 ATQRGQGDLQ CPHCLQCFSD EQGEELFRHV ADCCQ bmy_05456T0/1-384 AAQRGQGDLQ CPHCLQCFSD EQGEELFRHV AECCQ BACU004132/1-318 ATQRGQGDLQ CPHCLQCFSD EQGEELFRHV AECCQ