KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:25 2014 Check: 00 .. Name: ENSP00000298386/1-754 Len: 782 Check: 5790 Weight: 1.00 Name: ENSBTAP00000020135/1-755 Len: 782 Check: 5838 Weight: 1.00 Name: ENSTTRP00000013105/1-752 Len: 782 Check: 531 Weight: 1.00 Name: bmy_17787T0/1-764 Len: 782 Check: 3817 Weight: 1.00 Name: BACU020131/1-723 Len: 782 Check: 9873 Weight: 1.00 // 1 50 ENSP00000298386/1-754 MIVFLVFKHL FSLRLITMFF LLHFIVLINV K-DFAL---- ----TQGSMI ENSBTAP00000020135/1-755 ALIPFLVELM FGMTVIILNV IIKNITQRNC KTDCAL---- ----TEGSTI ENSTTRP00000013105/1-752 -VVIFLIKRL FSRRLIAMFL LLHFIILMDV K-DFAL---- ----TEGSTI bmy_17787T0/1-764 ---------- -------MFL LLHFIVLMDV K-AKLLIFKL ANMFDKGKIM BACU020131/1-723 ---------- ---------- ---------- --DFAL---- ----TEGSTI 51 100 ENSP00000298386/1-754 TPSCQKGYFP CGNLTKCLPR AFHCDGKDDC GNGADEENCG DTSGWATIFG ENSBTAP00000020135/1-755 TPLCPKGYFP CGNLSQCLPR AFHCDGVEDC GNGADEENCG DTSGWATIFG ENSTTRP00000013105/1-752 TPLCPKGYFP CGNLTQCLPR AFHCDGVDDC GNGADEENCG DTSGWATLFG bmy_17787T0/1-764 LSPSSPGYFP CGNLTQCLPR AFHCDGVDDC GNGADEENCG DTSGWATLFG BACU020131/1-723 TPLCPKGYFP CGNLTQCLPR AFHCDGVDDC GNGADEENCG DTSGWATLFG 101 150 ENSP00000298386/1-754 TVHGNANSVA LTQECFLKQY PQCCDCKETE LECVNGDLKS VPMISNNVTL ENSBTAP00000020135/1-755 TVHGNANNVA LTQECFLDQY PQRCVCKGTE LECVNAGLKS VPVVSSNVTL ENSTTRP00000013105/1-752 TVHGDANNVA LTQECFLNQY PQRCDCKGTE LECINAGLKS VPTVSSNVTL bmy_17787T0/1-764 TVHGDANNVA LTQECFLNQY PQRCDCKETE LECINAGLKS VPTISSNVTL BACU020131/1-723 TVHGDANNVA LTQECFLNQY PQRCDCKETE LECINAGLKS VPTVSSNVTL 151 200 ENSP00000298386/1-754 LSLKKNKIHS LPDKVFIKYT KLKKIFLQHN CIRHISRKAF FGLCNLQILY ENSBTAP00000020135/1-755 LSLKKNNIHS LSDKVFIKYT ELKKIFLQRN CITYISRKAF FGLHNLQILY ENSTTRP00000013105/1-752 LSLKKNSIHS LSDKVFIKYT ELKKIFLQHN CIRHISRKAF FGLHNLQILY bmy_17787T0/1-764 LSLKKNSIHS LSDKVFIKYT ELKKIFLQHN CIRHISRKAF FGLHNLQILY BACU020131/1-723 LSLKKNSIQS LSDKVFIKYT ELKKIFLQHN CIRHISRKAF FGLHNLQILY 201 250 ENSP00000298386/1-754 LNHNCITTLR PGIFKDLHQL TWLILDDNPI TRISQRLFTG LNSLFFLSMV ENSBTAP00000020135/1-755 LNHNCITTLR PGVFKDLHQL TWLILDDNPI SRISQRLFTG LNSLFFLSMV ENSTTRP00000013105/1-752 LNHNCITTLR PGVFKDLHHL TWLILDDNPI TRISQRLFTG LNSLFFLSMV bmy_17787T0/1-764 LNHNCITTLR PGVFKGLHHL TWLILDDNPI TRISQRLFTG LNSLFFLSMV BACU020131/1-723 LNHNCITTLR PGVFKDLHHL TWLILDDNPI TRISQRLFTG LNSLFFLSMV 251 300 ENSP00000298386/1-754 NNYLEALPKQ MCAQMPQLNW VDLEGNRIKY LTNSTFLSCD SLTVL----- ENSBTAP00000020135/1-755 NNHLQVLPKQ MCAQMPQLNW MDLEGNGIKF LTNSTFLSCS SLTVL----- ENSTTRP00000013105/1-752 NNYLEALPKQ MCAQMPQLNW XXXXXXXXXX XXXXTFLSCN SLTVL----- bmy_17787T0/1-764 NNYLEALPKQ MCAQMPQLNW MDLEGNGIKY LTNSTFLSCN SLTVLTDYYS BACU020131/1-723 NNYLETLPKQ MCAQMPQLNW MDLEGNGIKY LTNSTFLSCN SLTVL----- 301 350 ENSP00000298386/1-754 ---------- ----FLPRNQ IGFVPEKTFS SLKNLGELDL SSNTITELSP ENSBTAP00000020135/1-755 ---------- ----FLPRNQ IGFVPEKTFS SLKNLGELDL SSNMISELPP ENSTTRP00000013105/1-752 ---------- ----FLPRNQ IDFVPEKTFS SLKNLGELDL SSNMIMELPP bmy_17787T0/1-764 RHKSTMLTLT MSYRFLPRNQ IDFVPEKTFS SLKNLGELDL SSNMIMELPP BACU020131/1-723 ---------- ----FLPRNQ IDFVPEKTFS SLKNLGELDL SSNMIMELPP 351 400 ENSP00000298386/1-754 HLFKDLKLLQ KLNLSSNPLM YLHKNQFESL KQLQSLDLER IEIPNINTRM ENSBTAP00000020135/1-755 HIFKDLKCLQ KLNLSSNPLL YLHKSQFGSL KQLQSLDLER IEIPNINTRM ENSTTRP00000013105/1-752 HIFKDLKLLQ KLNLSSNPLL YLHKNQFESL KQLQSLDLGR IEIPSINTQM bmy_17787T0/1-764 HIFKDLKLLQ KLNLSSNPLL YLHKNQFESL KQLQSLDLER IEIPSINTQM BACU020131/1-723 HIFKDLKLLQ KLNLSSNPLL YLHKNQFESL KQLQSLDLER IEIPSINTQM 401 450 ENSP00000298386/1-754 FQPMKNLSHI YFKNFRYCSY APHVRICMPL TDGISSFEDL LANNILRIFV ENSBTAP00000020135/1-755 FQPMKNLSYI YFKNFRYCSY APHVRICMPL TDGISSFEDL LANNILRVFV ENSTTRP00000013105/1-752 FQPMKNLSHI YFKNFRYCSY ASHVRICMPL TDGISSFEDL LANNILRIFV bmy_17787T0/1-764 FQPMKNLSHI YFKNFRYCSY ASHVRICMPL TDGISSFEDL LANNILRIFV BACU020131/1-723 FQPMKNLSHI YFKNFRYCSY ASHVRICMPL TDGISSFEDL LANNILRIFV 451 500 ENSP00000298386/1-754 WVIAFITCFG NLFVIGMRSF IKAENTTHAM SIKILCCADC LMGVYLFFVG ENSBTAP00000020135/1-755 WVIAFITCFG NLFVIGMRSF IKAENTTHAT SIKILCCADC LMGVYLFFIG ENSTTRP00000013105/1-752 WVIAFITCFG NLFVIGMRSF IKAENMTHAT SIKILCCADC LMGVYLFFVG bmy_17787T0/1-764 WVIAFITCFG NLFVIGMRSF IKAENTTHAT SIKILCCADC LMGVYLFFVG BACU020131/1-723 WVIAFITCFG NLFVIGMRSF IKAENTTHAT SIKILCCADC LMGVYLFFVG 501 550 ENSP00000298386/1-754 IFDIKYRGQY QKYALLWMES VQCRLMGFLA MLSTEVSVLL LTYLTLEKFL ENSBTAP00000020135/1-755 LCDLKYRGQY QKYALLWMES LQCRLLGFLA MLSTEVSVLL LTYLTLEKFL ENSTTRP00000013105/1-752 FFDLKYRGQY QKYALLWMES LQCRLLGFLA MLSTEVSVLL LTYLTLEKFL bmy_17787T0/1-764 VFDLKYRGQY QKYALLWMES LECRLLGFLA VLSTEVSVLL LTYLTLEKFL BACU020131/1-723 VFDLKYRGQY QKYALLWMES LECRLLGFLA VLSTEVSVLL LTYLTLEKFL 551 600 ENSP00000298386/1-754 VIVFPFSNIR PGKRQTSVIL ICIWMAGFLI AVIPFWNKDY FGNFYGKNGV ENSBTAP00000020135/1-755 AVVFPFSNIR PGKWQTLAVL ICIWIVGFLI AVTPLWKEDY FGNFYGKNGV ENSTTRP00000013105/1-752 AVVFPFSNIR PGKRQTSVIL IGIWIVGFLI AVIPFWKEDY FGNFY-KNGV bmy_17787T0/1-764 AVVFPFSNIR PGKWQTSVIL ICIWIVGFLI AVIPFWKEDY FGNFYGKNGV BACU020131/1-723 AVVFPFSNIR PGKWQTSVIL ICIWIVGFLI AVIPFWKEDY FGNFYGKNGV 601 650 ENSP00000298386/1-754 CFPLYYDQTE DIGSKGYSLG IFLGVNLLAF LIIVFSYITM FCSIQKTALQ ENSBTAP00000020135/1-755 CFPLYYDQTE DIGSKGYSLG IFLGVNLLAF LIIVFSYTVM FCSIQKTALQ ENSTTRP00000013105/1-752 CFPLYYDQTE DFGSKGYSLG IFLGVNLLAF LIIVFSYTIM FCSIQKTALQ bmy_17787T0/1-764 CFPLYCDQTE DIGSKGYSLG IFLGMNLLAF LIIVFSYTVM FCSIQKTALQ BACU020131/1-723 CFPLYYDQTE DIGSKGYSLG IFLGMNLLAF LIIVFSYTIM FCSIQKTALQ 651 700 ENSP00000298386/1-754 TTEVRNCFGR EVAVANRFFF IVFSDAICWI PVFVVKILSL FRVEIPDTMT ENSBTAP00000020135/1-755 TSDERSHMGR EVAVANRFFF IVFSEAICWI PVFVIKILSL SRVEIPDTIT ENSTTRP00000013105/1-752 TSEVRNNTGR EAAVANRFFF IVFSDAICWI PVFVIKILSL FRVEIPETIT bmy_17787T0/1-764 TSEVRNNTGR EAAVANRFFF IVFSDAICWI PVFVIKILSL FRVEIPETIT BACU020131/1-723 TSELRNDTGR EAAVANRFFF IVFSDAICWI PVFVIKILSL FRVEIPETIT 701 750 ENSP00000298386/1-754 SWIVIFFLPV NSALNPILYT LTTNFFKDKL KQLLHKHQRK SIFKIKKKSL ENSBTAP00000020135/1-755 SWVVIFFLPV NSALNPILYT LTTSFFKDKL KQLLHKHRRK SIFKTKKKSV ENSTTRP00000013105/1-752 SWVVIFFLPV NSALNPILYT LTTSFFKDKL KQLLHKHQRK SIFRTKKKSL bmy_17787T0/1-764 SWVVIFFLPV NSALNPILYT LTTSFFKDKL KQLLHKHXRK SIFKTEKKSL BACU020131/1-723 SWVVIFFLPV NSALNPILYT LTTSFFKDKL KQLLHKHQRK SIFKTKKKSL 751 800 ENSP00000298386/1-754 STSIVWIEDS SSLKLGVLNK ITLGDSIMKP VS ENSBTAP00000020135/1-755 STSIMWADDS SALKPGALSK INLEDNIVKP IS ENSTTRP00000013105/1-752 STSIVWADDS SSVKLGVLNK INLEENIVKP AS bmy_17787T0/1-764 STSIVWADDS SSLKLGVLNK INLEENIVKP VS BACU020131/1-723 STSIVWADDS SSLKLGVSNK INLEENIVKP VS