KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:26 2014 Check: 00 .. Name: ENSBTAP00000020140/1-616 Len: 616 Check: 1063 Weight: 1.00 Name: ENSP00000354622/1-613 Len: 616 Check: 4167 Weight: 1.00 Name: ENSTTRP00000011134/1-561 Len: 616 Check: 2614 Weight: 1.00 Name: bmy_21168T0/1-591 Len: 616 Check: 38 Weight: 1.00 Name: BACU007108/1-520 Len: 616 Check: 5623 Weight: 1.00 // 1 50 ENSBTAP00000020140/1-616 MAAVEAAAEP VTGLAGSGPK AKDEEEEEEE SLPPCEAVRW APVGAVAEAG ENSP00000354622/1-613 MAAVEAAAEP VTVVAAVGPK AKDEEEEEEE PLPPCEAVRW APVGAVAEAR ENSTTRP00000011134/1-561 ---------- ---------- ---------- ---------- ---------- bmy_21168T0/1-591 MAALKAAAEP VTGVAAVGPK AKDEEEEEEE SLPPCEAVRW APVGAVAEAG BACU007108/1-520 MAALEAAAEP ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000020140/1-616 PGAAAFSEEA AAEEPGVVPG SPPDSPGRTL RRLRAERRRL DSALLALSSH ENSP00000354622/1-613 PGATAFLEEA TAEEPGAAPG SPPDSPGRTL RRLRAERRRL DSALLALSSH ENSTTRP00000011134/1-561 --AAAFSEEA AAEEPGAAPG SPPDSPGRTL RRLRAERRRL DSALLALSSH bmy_21168T0/1-591 PGAAAFSEEA AAEEPGAAPG SPPDSPGRTL RQLRAERRRL DSALLALSSH BACU007108/1-520 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000020140/1-616 FAQVQFRLRQ VVRGAPAEQQ RLLRELEDFA FRGCPHVLGY GGLEDRASDD ENSP00000354622/1-613 FAQVQFRLRQ VVRGAPAEQQ RLLRELEDFA FRGCPHVLGY EGPGDPASDE ENSTTRP00000011134/1-561 FAQVQFRLRQ VVRGAPAEQQ RLLSELEDFA FRGCPHVLGY GSPEDPTSDD bmy_21168T0/1-591 FAQVQFRLRQ VVRGAPAEQQ RLLSELEDFA FRGCPHVLGY GNPEDPASDD BACU007108/1-520 ---VQFRLRQ VVRGAPAEQQ RLLSELEDFA FRGCPHVLGY GSPEDPASDD 151 200 ENSBTAP00000020140/1-616 GDGLPGDRPQ LRGEDQSEQE KRERLETQRE KQKELILQLK TQLLGFLCPF ENSP00000354622/1-613 GDGLPGDRPW LRGEDQSEQE KQERLETQRE KQKELILQLK TQLDDLET-F ENSTTRP00000011134/1-561 GDGMPGDRPR LRGEDQSEQE KREHLETQRE KQKELILQLK TQLDDLET-F bmy_21168T0/1-591 GDGMPGDRPR LRGEDQSEQE KREHLETQRE KQKELILQLK TQLDDLET-F BACU007108/1-520 GDGMPGDRPR LRGEDQSEQE KREHLETQRE KQKELILQLK TQLDDLET-F 201 250 ENSBTAP00000020140/1-616 QHSQDSPSQL AHPRPHHWPK SKVIIDELIK KLDMNLNEDL SSLSTEELRQ ENSP00000354622/1-613 AYQEGSYDSL --PQSVVLER QRVIIDELIK KLDMNLNEDI SSLSTEELRQ ENSTTRP00000011134/1-561 AYQEGSYDSL --PQSVVLER QRVIIDELIK KLDMNLNEDL SSLSTEELRQ bmy_21168T0/1-591 AYQEGSYDSL --PQSVVLER QRVIIDELIK KLDMNLNEDL SSLSTEELRQ BACU007108/1-520 AYQEGSYDSL --PQSVVLER QRVIIDELIK KLDMNLNEDL SSLSTEELRQ 251 300 ENSBTAP00000020140/1-616 RVDAAVAQIV NPARVKEQLV EQLKTQIRDL EMFISFIQDE VGSPLQTGSG ENSP00000354622/1-613 RVDAAVAQIV NPARVKEQLV EQLKTQIRDL EMFINFIQDE VGSPLQTGGG ENSTTRP00000011134/1-561 RVDVAVAQIV NPARVKEQLV EQLKTQIRDL EMFISFIQDE VGSPLQTGSG bmy_21168T0/1-591 RVDVAVAQIV NPARVKEQLV EQLKTQIRDL EMFISFIQDE VGSPLQTGSG BACU007108/1-520 RVDVAVAQIV NPARVKEQLV EQLKTQIRDL EMFISFIQDE VGSPLQTGSG 301 350 ENSBTAP00000020140/1-616 HCECKASGKT GSDSSRTGSS RLPPGNSKTK AEDVKRVRET GLHLMRRALA ENSP00000354622/1-613 HCECKAGGKT GNGCSRTGSS RTPPGNSKTK AEDVKKVRET GLHLMRRALA ENSTTRP00000011134/1-561 HCECKASGKT GNGSCRTGSS RPPPGNSKTK AEDMKRVRET GLHLMRRVLA bmy_21168T0/1-591 HCECKA---- ---------- --------TK AEDMKRVRET GLHLMRRALA BACU007108/1-520 HCECKASGKT GNGSCRTGSS RPPPGNSRTK AEDMKRVRET GLHLMRRVLA 351 400 ENSBTAP00000020140/1-616 VLQIFAVSQF GCATGQIPQP LWPRGHGDRD YSPLLKRLEV SVDRVKLLAL ENSP00000354622/1-613 VLQIFAVSQF GCATGQIPPT LWQRVQADRD YSPLLKRLEV SVDRVKQLAL ENSTTRP00000011134/1-561 VLQIFAVSQF GCATGQIPQT LWQRDQADRD YSPLLKRLEV SVDRVKQLAL bmy_21168T0/1-591 VLQIFAVSQF GCATGQIPQT LWQRDQADRD YSPLLKRLEV SVDRVKQLAL BACU007108/1-520 VLQIFAVSQF GCATGQIPQT LWQRDQADRD YSPLLKRLEV SVDRVKQLAL 401 450 ENSBTAP00000020140/1-616 RHQAHDHVIS SARLQDLSLG GKDELTVAVR KELTVAVRDL LAHGLYAPSP ENSP00000354622/1-613 RQQPHDHVIT SANLQDLSLG GKDELTMAVR KELTVAVRDL LAHGLYASSP ENSTTRP00000011134/1-561 RHQAHDHFSS SASLQDLSLG GKDELTVAVR KELTVAVRDL LAHGLYASSP bmy_21168T0/1-591 RHQAHDHFIS SAGLQDLSLG GKDELTAAVR KELTVAVRDL LAHGLYASSP BACU007108/1-520 RHQAHDHFIS SAGLQDLSLG GKDELTAAVR KELTVAVRDL LAHGLYASSP 451 500 ENSBTAP00000020140/1-616 GMSLVMAPIA CLLPAFSSAP EAMHPWELFV KYYHAKNGRA FVESPARKLS ENSP00000354622/1-613 GMSLVMAPIA CLLPAFSSAP EAMHPWELFV KYYHAKNGRA YVESPARKLS ENSTTRP00000011134/1-561 GMSLVMAPIA CLLPAFSSAP EAMHPRELFV KYYHAKNVRA YVESPARKLS bmy_21168T0/1-591 GMSLVMAPIA CLLPAFSSAP EAMHPWELFV KYYHAKNGRA YVESPARKLS BACU007108/1-520 GMSLVMAPIA CLLPAFSSAP EAMHPWELFV KYYHAKNGRA YVESPARKLS 501 550 ENSBTAP00000020140/1-616 QSFALPVTGG TVVTPKQSLL TAIHMVLTEH DPFKRSADSE LKALVCMALN ENSP00000354622/1-613 QSFALPVTGG TVVTPKQSLL TAIHMVLTEH DPFKRSADSE LKALVCMALN ENSTTRP00000011134/1-561 QSFALPVMGG TVVTPKQSLL TAIHAVGTEP DPNKTSAVSE LKARVCMALN bmy_21168T0/1-591 QSFALPVMGG TVVTPKQSLL TAIHVVLTEH DPFKRSADSE LKALVCMALN BACU007108/1-520 QSFALPVMGG TVVTPKQSLL TAIHVVLTEH DPFKRSADSE LKALVCMALN 551 600 ENSBTAP00000020140/1-616 EQRLVSWMNL ICKSGSLIEP HYQPWSYMAH TGFESALNLL SRLSSLKFSL ENSP00000354622/1-613 EQRLVSWVNL ICKSGSLIEP HYQPWSYMAH TGFESALNLL SRLSSLKFSL ENSTTRP00000011134/1-561 EQRLVSWVNL ICKSGSIIEP HYQPWSYMAH TGFESALNLI SRLSSLKFSL bmy_21168T0/1-591 EQRLVSWVNL ICKSGSLIEP HYQPWSYMAH TGFESALNLL SRLSSLKFSL BACU007108/1-520 EQRLVSWVNL ICKSGSLIEP HYQPWSYMAH TGFESALNLL SRLSSLKFSL 601 650 ENSBTAP00000020140/1-616 PVDLAVRQLK NIKDAF ENSP00000354622/1-613 PVDLAVRQLK NIKDAF ENSTTRP00000011134/1-561 PVDLAVRQLK NIKDAF bmy_21168T0/1-591 PVDLAVRQLK NIKDAF BACU007108/1-520 PVDLAVRQLK NIKDAF