KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:29 2014 Check: 00 .. Name: ENSP00000303231/1-253 Len: 292 Check: 9850 Weight: 1.00 Name: ENSBTAP00000020153/1-221 Len: 292 Check: 9644 Weight: 1.00 Name: ENSTTRP00000008806/1-253 Len: 292 Check: 2951 Weight: 1.00 Name: bmy_07617T0/1-263 Len: 292 Check: 6728 Weight: 1.00 Name: BACU012262/1-235 Len: 292 Check: 5156 Weight: 1.00 // 1 50 ENSP00000303231/1-253 MWPPGSASQP PPSPAAATGL HPAARPVSLQ CRLSMCPAR- ---SLLLVAT ENSBTAP00000020153/1-221 ---------- ---------- ---------- ----MCPLR- ---SLLLIST ENSTTRP00000008806/1-253 -MPPGSAFQP PPSPAACTRL RPAARSVPPQ -RLSMCPPR- ---RLLLVAT bmy_07617T0/1-263 ---------- ---------- --------ME VGQLILPLHS LS-GLLLVAT BACU012262/1-235 ---------- -MEKRNDNIE KDSERPLWEP GGKPAIPLPG ISAGLLLVAT 51 100 ENSP00000303231/1-253 LVL---LDHL SLARNLPVAT PDPGMFPCLH HSQNLLRAVS NMLQK----- ENSBTAP00000020153/1-221 LVLLHHLPHL SLGRSLPTTT ASPGR-SCLD YSQNLLRAVS NTLQK----- ENSTTRP00000008806/1-253 LVLLHHLDHF SLARSLPATT AGPGMFQCLN HSQNLLRAVS NTLGK----- bmy_07617T0/1-263 LVLLHHLDHF SLARNLPATT AGPGMFQCLN HSQNLLRAVS NTLQKTLKFL BACU012262/1-235 LVLLHHLDHF SLARNLPATT AGPGMFQCLN HSQNLLRAVS NTLQK----- 101 150 ENSP00000303231/1-253 ---------- ---------- -------ARQ TLEFYPCTSE EIDHEDITKD ENSBTAP00000020153/1-221 ---------- ---------- -------ARQ TLEFYSCTSE EIDHEDITKD ENSTTRP00000008806/1-253 ---------- ---------- -------ARQ TLEFYSCTSE EIDHEDITKD bmy_07617T0/1-263 QIRGGGQGQP ALALVPVPWG AGCLINLARQ TLEYYSCTSE DIDHEDITKD BACU012262/1-235 ---------- ---------- -------ARQ TLELYSCTSE EIDHEDITKD 151 200 ENSP00000303231/1-253 KTSTVEACLP LELTKNESCL NSRETSFITN GSCLASRKTS FMMALCLSSI ENSBTAP00000020153/1-221 KTSTVEACLP LELATNESCL ASRETSFITN GHCLASGKTS FMTTLCLRSI ENSTTRP00000008806/1-253 RTSTVEACLP LELATNESCL ASRETSLITN GSCLASRRSS FMTTLCLSSI bmy_07617T0/1-263 RTSTVEACLP LELATNESCL ASRETSLITN GSCLASRKSS FMMTLCLSSI BACU012262/1-235 RTSTVEACLP LELA------ --------TN GSCLASRKSS FMMTLCLSSI 201 250 ENSP00000303231/1-253 YEDLKMYQVE FKTMNAKLLM DPKRQIFLDQ NMLAVIDELM QALNFNSETV ENSBTAP00000020153/1-221 YEDLKMYHVE FQAMNAKLLM DPKRQIFLDQ NMLAAIAELM QALNFDSETV ENSTTRP00000008806/1-253 YEDLKMYHME FQAMNAKLLM DPKRQIFVDQ DMLVAIAELM QALNSHSKIV bmy_07617T0/1-263 YEDLKMYHME FQAMNAKLLM DPKRQIFLDQ NMLAAIAELM QALNSHSKTV BACU012262/1-235 YEDLKMYHME FQAMNAKLLM DPERQIFLDQ NMLAAIAELM QALNSHSETV 251 300 ENSP00000303231/1-253 PQKSSLEEPD FYKTKIKLCI LLHAFRIRAV TIDRVMSYLN AS ENSBTAP00000020153/1-221 PQKPSLKELD FYKTKVKLCI LLHAFRIRAV TIDRMMSYLS SS ENSTTRP00000008806/1-253 SQKPSLEELD FYKTKVKLCI LLHAFRIRVV TIDRMMSYLS S- bmy_07617T0/1-263 SQKPSLEELD FYKTKIKLCI LLHAFRIRVV TIDRMMSYLS SS BACU012262/1-235 SQKPSLEELD FYKTKIKLCI LLHAFRIRVV TIDRMMSYLS SS