KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:29 2014 Check: 00 .. Name: BACU013884/1-167 Len: 439 Check: 8650 Weight: 1.00 Name: ENSTTRP00000003508/1-430 Len: 439 Check: 3776 Weight: 1.00 Name: ENSP00000343633/1-431 Len: 439 Check: 3620 Weight: 1.00 Name: bmy_17994T0/1-242 Len: 439 Check: 403 Weight: 1.00 Name: ENSBTAP00000020154/1-439 Len: 439 Check: 8738 Weight: 1.00 // 1 50 BACU013884/1-167 MGPIIGMTPE KRAETPGAEK VAGLSQIYKM GSLPEAVDAA RPKATLVNSE ENSTTRP00000003508/1-430 MGPIIGMTPE KRAETPGAEK VAGLSQIYKM GSLPEAVDAA RPKATLVNSE ENSP00000343633/1-431 MGPVIGMTPD KRAETPGAEK IAGLSQIYKM GSLPEAVDAA RPKATLVDSE bmy_17994T0/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020154/1-439 MGPVIGMTPE KRAETPGAEK VAGLSQIYKM GSLPEAVDAA RPKATLVDNE 51 100 BACU013884/1-167 SADDELTNLN WLHESTNLLT NFSFGSEGLP IVSPLYDIEG DDVPSLGPSC ENSTTRP00000003508/1-430 SADDELTNLN WLHESTNLLT NFSFGSEGLP IVSPLYDIEG DDVPSLGPSC ENSP00000343633/1-431 SADDELTNLN WLHESTNLLT NFSLGSEGLP IVSPLYDIEG DDVPSFGPAC bmy_17994T0/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020154/1-439 SADDELTNLN WLHESTNLLT NFSFGSEGLP IVSPLYDIEG DDVPSFGPSC 101 150 BACU013884/1-167 YPNPEKKSAT SKPPYSFSLL IYMAIEHSPN ---------- ---------- ENSTTRP00000003508/1-430 YQNPEKKSAT SKPPYSFSLL IYMAIEQSPN KCLPVKEIYS WILNRFPYFA ENSP00000343633/1-431 YQNPEKKSAT SKPPYSFSLL IYMAIEHSPN KCLPVKEIYS WILDHFPYFA bmy_17994T0/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020154/1-439 YQSQEKKSAT SKPPYSFSLL IYMAIEHSPN KCLPVKEIYS WILNRFPYFA 151 200 BACU013884/1-167 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003508/1-430 TAPTGWKNSV RHNLSLNKCF QKVERSHGKV XXXXXXXXXX XXXXXXXXQA ENSP00000343633/1-431 TAPTGWKNSV RHNLSLNKCF QKVERSHGKV NGKGSLWCVD PEYKPNLIQA bmy_17994T0/1-242 ---------- ---------- ---------- ---------- -------MQA ENSBTAP00000020154/1-439 TAPTGWKNSV RHNLSLNKCF QKVERSHGKV NGKGSLWCVD PEYKPNLMQA 201 250 BACU013884/1-167 ---------- ---------- ---------- ---KXXXXXX XXXXXXXXXX ENSTTRP00000003508/1-430 LKKQPFPS-- ------ASPQ SGSLS-HYLS SVLKQNQVRT LKXXXXXXXX ENSP00000343633/1-431 LKKQPFSS-- ------ASSQ NGSLSPHYLS SVIKQNQVRN LKESDIDAAA bmy_17994T0/1-242 LKKQPFPSRS TFYTPPXSPQ SGSLSPHYLS SVLKQNQVRT LKESDIDAAT ENSBTAP00000020154/1-439 LKKQPFSSKS TFYSPPASPQ SGSLSPHYLS SVLKQNQVRT LKESDIDAAT 251 300 BACU013884/1-167 XXXXXXXXXX GRIL------ ---------- ---------- ---------- ENSTTRP00000003508/1-430 XXXXXXXXXX XXXXXXEKPL PLKTAVQKKR SYSNAFNHSS AMRLHESDSL ENSP00000343633/1-431 AMMLLNTSIE QGILECEKPL PLKTALQKKR SYGNAFHHPS AVRLQESDSL bmy_17994T0/1-242 AMMLLNTSIE QGILECEKPL PLKTAVQKKR SYSNAFNHSS AMRLHESDSL ENSBTAP00000020154/1-439 AMMLLNTSIE QGILECEKPL PLKTAMQKKR SYSNAFNHSS AMRLHESDSL 301 350 BACU013884/1-167 ---------- ---------- ---------- -------FDI I--------- ENSTTRP00000003508/1-430 ATSIDPKEDH NYSASSMTAQ RCASRSSVSS LSSVDEVYEF IPKSSHVGSD ENSP00000343633/1-431 ATSIDPKEDH NYSASSMAAQ RCASRSSVSS LSSVDEVYEF IPKNSHVGSD bmy_17994T0/1-242 ATSIDPKEDH NYSASSMTAQ RCASRSSVSS LSSVDEVYEF IPKSSHVGSD ENSBTAP00000020154/1-439 ATSIDPKEDH NYSASSMAAQ RCASRSSVSS LSSVDEVYEF IPKSSHVGSD 351 400 BACU013884/1-167 ---------- ---------- ---------C P--------- ---------- ENSTTRP00000003508/1-430 GSEGFHSEED TDVDYEDDPL GDSGYASQAC ADTSEKGQPD KKMRKQSCQE ENSP00000343633/1-431 GSEGFHSEED TDVDYEDDPL GDSGYASQPC AKISEKGQSG KKMRKQTCQE bmy_17994T0/1-242 GSEGFHSEED TDVDYEDDPL GDSGYASQAC ADTSEKGQPD KKMRKQSCQE ENSBTAP00000020154/1-439 GSEGFRSEED TDVDYEDDPL GDSGYASQAC ADTTEKGQPD KKMRKQACQE 401 450 BACU013884/1-167 ---------- ---------- ---------- --------- ENSTTRP00000003508/1-430 IDEELKEAAG SLLHLAGIRT CLGSLISTAK TQNQKQRKK ENSP00000343633/1-431 IDEELKEAAG SLLHLAGIRT CLGSLISTAK TQNQKQRKK bmy_17994T0/1-242 IDEELKEAAG SLLHLAGIRT CLGSLISTAK TQNQKQRKK ENSBTAP00000020154/1-439 IDEELKEAAG SLLHLAGIRT CLGSLISTAK TQNQKQRKK