KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:29 2014 Check: 00 .. Name: ENSTTRP00000010843/1-330 Len: 374 Check: 1178 Weight: 1.00 Name: ENSBTAP00000020161/1-316 Len: 374 Check: 7028 Weight: 1.00 Name: ENSP00000339186/1-330 Len: 374 Check: 4912 Weight: 1.00 Name: bmy_00979T0/1-320 Len: 374 Check: 4664 Weight: 1.00 Name: BACU013392/1-288 Len: 374 Check: 2495 Weight: 1.00 // 1 50 ENSTTRP00000010843/1-330 ---------- ---------- ---------- --MEAIAKFD FMASGEDELS ENSBTAP00000020161/1-316 ---------- ---------- ---------- --MEAIAKFD FMASGEDELG ENSP00000339186/1-330 ---------- ---------- ---------- --MEAVAKFD FTASGEDELS bmy_00979T0/1-320 MLPQGKHPGD RNRLVWVSRR IFQQRLTASR YNMEAIAKFD FMASGEDELS BACU013392/1-288 ---------- ---------- ---------- --MEAIAKFD FMASGEDELS 51 100 ENSTTRP00000010843/1-330 FHAGDVLKIL SNQEEWFKAE LRSQEGYVPK NFIDIKFPEW FHEGLSRHQA ENSBTAP00000020161/1-316 FHAGDVLKIL SNQGEWFKAE LGSQEGYVPK NFIEIEFPEW FHEGLSRHQA ENSP00000339186/1-330 FHTGDVLKIL SNQEEWFKAE LGSQEGYVPK NFIDIQFPKW FHEGLSRHQA bmy_00979T0/1-320 FHAGDVLKIL SNQEEWFKAE LRSQEGYVPK NFIDIKFPE- ---------- BACU013392/1-288 FHAGDVLKIL SNQEEWFKAE LRSQEGYVPK NFIDIKFPE- ---------- 101 150 ENSTTRP00000010843/1-330 ESLLMGKEVG CFIIRASQSS PGDFSISVRH EGDVQHFKVM KDNKGNYFLW ENSBTAP00000020161/1-316 ESLLMGKELG CFIIRASQSS PGDFSISVRH EDDVQHFKVM RDNKGNYFLW ENSP00000339186/1-330 ENLLMGKEVG FFIIRASQSS PGDFSISVRH EDDVQHFKVM RDNKGNYFLW bmy_00979T0/1-320 ---------- ---------- ---------H EDDVQHFKVM KDNKGSYFLW BACU013392/1-288 ---------- ---------- ---------H EDDVQHFKVM KDNKGSYFLW 151 200 ENSTTRP00000010843/1-330 TEKFPSLNKL VDYYRTTSIS KQKQIFLRDR TREEQGQRGN SLDRRSQGGP ENSBTAP00000020161/1-316 TEKFPSLNKL VDYYRKNSIS KQKQIFLRDR TREEQGQRGN SLDRRSQGGH ENSP00000339186/1-330 TEKFPSLNKL VDYYRTNSIS RQKQIFLRDR TREDQGHRGN SLDRRSQGGP bmy_00979T0/1-320 TEKFPSLNKL VDYYRTTSIS KQKQIFLRDR TREEQGQRGN SLDRRSQGGP BACU013392/1-288 TEKFPSLNKL VDYYRTTSIS KQKQIFLRDG TREEQGQRGN SLDRRSQGGP 201 250 ENSTTRP00000010843/1-330 PLSGTAGXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000020161/1-316 PLSGAVGEEI RPSMNRKPSD HPL------- ---LPPSQYP PAP----LPA ENSP00000339186/1-330 HLSGAVGEEI RPSMNRKLSD HPPTLPLQQH QHQPQPPQYA PAPQQLQQPP bmy_00979T0/1-320 PLSGTVGEEV RPSMNRKLSD HPP------- ---PPPSQYP PAP----LPP BACU013392/1-288 PLSGTVGEEV RPSMNRKLSD HPP------- ---PPPSQFA PAP----LPP 251 300 ENSTTRP00000010843/1-330 XXXXXXXXXX XX-------- ---ERRGGSL DINDGHCGMG NSSEMNAALM ENSBTAP00000020161/1-316 QQRYMPQHHF NQ-------- ---ERRGASL DINDGPCGLG MSTEMNAALM ENSP00000339186/1-330 QQRYLQHHHF HQ-------- ---ERRGGSL DINDGHCGTG LGSEMNAALM bmy_00979T0/1-320 QQRYLQQHHF HQVSGKNEVG HSEERRGGSL DINDGHCGIG NSSEMNAALM BACU013392/1-288 QQRYLQQQHF HQVSGKNEVG HSEERRGGSL DINDGHCGIG NSSEMNAALM 301 350 ENSTTRP00000010843/1-330 QRRHTDPVQL QAAG-RVRWA RALYDFEALE DDELGFHCGE VVEVLDSSNP ENSBTAP00000020161/1-316 HRRHTDPVQL QVAG-RVRWA RALYDFEALE DDELGFRCGE VVEVLDSSNP ENSP00000339186/1-330 HRRHTDPVQL QAAG-RVRWA RALYDFEALE DDELGFHSGE VVEVLDSSNP bmy_00979T0/1-320 HRRHTDPVQL QAAGQRVRWA RALYDFEALE DDELGFHCGE VVEVLDSSNP BACU013392/1-288 HRRHTDPVQL QAAGQRVRWA RALYDFEALE DDELGFHCGE VVEVLDSSNP 351 400 ENSTTRP00000010843/1-330 SWWTGRLHNK LGLFPANYVA PMTR ENSBTAP00000020161/1-316 SWWTGRLHNK LGLFPANYVA PMIR ENSP00000339186/1-330 SWWTGRLHNK LGLFPANYVA PMTR bmy_00979T0/1-320 SWWTGRLHNK LGLFPANYVA PVIR BACU013392/1-288 SWWTGRLHNK LGLFPANYVA PVIR