KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:10:30 2014 Check: 00 .. Name: bmy_12698T0/1-358 Len: 518 Check: 7541 Weight: 1.00 Name: ENSP00000408429/1-461 Len: 518 Check: 5403 Weight: 1.00 Name: ENSTTRP00000011259/1-487 Len: 518 Check: 1388 Weight: 1.00 Name: ENSBTAP00000020164/1-518 Len: 518 Check: 2518 Weight: 1.00 // 1 50 bmy_12698T0/1-358 MPTVVVMDVS LSMTRPVSIE GSEEYQRKHL AAHGLTMLFE HMATNYKLEF ENSP00000408429/1-461 MPTESLC--- ---RRTVSGD G--------- --HG------ ---------- ENSTTRP00000011259/1-487 MPTVVVMDVS LSMTRPVSIE GSEEYQRKHL AAHGLTMLFE HMATNYKLEF ENSBTAP00000020164/1-518 MPTVVVMDVS LSMTRPVSVE GSEEYQRKHL AAHGLTMLFE HMATNYKLEF 51 100 bmy_12698T0/1-358 TALVVFSSLW ELMVPFTRDY NTLQEALSNM DDYDKTCLES ALVGVCNIVQ ENSP00000408429/1-461 ---------- ---------- ----EALSNM DDYDKTCLES ALVGVCNIVQ ENSTTRP00000011259/1-487 TALVVFSSLW ELMVPFTRDY NTLQEALSNM DDYDKTCLES ALVGVCNIVQ ENSBTAP00000020164/1-518 TALVVFSSLW ELMVPFTRDY NTLQEALSNM DDYDKTCLES ALVGVCNIVQ 101 150 bmy_12698T0/1-358 QEWGGAIPCQ LKTLTTEVLQ FCSGSDTA-- ---------- ---------- ENSP00000408429/1-461 QEWGGAIPCQ VVLVTDGCLG IGRGSLRHSL ATQNQRSESN RFPLPFPFPS ENSTTRP00000011259/1-487 QEWGGAIPCQ VVLVTDGCLG IGRGSLRHSL ATHSQRSESN RFPLPFPFPS ENSBTAP00000020164/1-518 QEWGGAIPCQ VVLVTDGCLG IGRGSLRHSL ATHNQRGESN RFPLPFPFPS 151 200 bmy_12698T0/1-358 --YIVISTN- ---------- ---------- -----YVI-- ---------- ENSP00000408429/1-461 KLYIMCMANL EELQSTDSLE CLERLIDLNN GEGQIFTIDG PLCLKNVQSM ENSTTRP00000011259/1-487 KLYIMCMANL EELQSTDSLD CLERLIDLNN GEGQIFTIDG PLCLKNVQSM ENSBTAP00000020164/1-518 KLYIMCMANL EELQSTDSLD CLERLIDLNN GEGQIFTIDG PLCLKNVQSM 201 250 bmy_12698T0/1-358 ---------- RFWYLFKRRH XI-NTNILRK QHKYALR--- ---------- ENSP00000408429/1-461 FGKLIDLAYT PFHAVLKCGH LTADVQVFPR PEPFVVDEEI DPIPKVINTD ENSTTRP00000011259/1-487 FGKLIDLAYT PFHAVLKCGH LTADVQVFPR PEPFIVDEEI DPIPKVINT- ENSBTAP00000020164/1-518 FGKLIDLAYT PFHAVLKCGH LTADVQVFPR PEPFVIDEEI DPIPKVINTD 251 300 bmy_12698T0/1-358 ---------- ---------- ---------- ---------- ---------- ENSP00000408429/1-461 LEIVGFIDIA DISSPPVLSR HLVLPIALNK EGDEVGTGIT DDNEDENSAN ENSTTRP00000011259/1-487 ---------- ---------- ---------- EGDEVGTGIT DDNEDENSAN ENSBTAP00000020164/1-518 LEIVGFIDIA DISSPPVLSR HLVLPIALNK EGDEVGTGIT DDNEDENSAN 301 350 bmy_12698T0/1-358 ----KASSY- ---------- ---------P EWHGMLYSQA DSKKKSNLMM ENSP00000408429/1-461 QIAGKIPNFC VLLHGSLKVE GMVAIVQLGP EWHGMLYSQA DSKKKSNLMM ENSTTRP00000011259/1-487 QIAGKIPNFC VLLHGSLKVE GMVAIVQLGP EWHGMLYSQA DSKKKSNLMM ENSBTAP00000020164/1-518 QIAGKIPNFC VLLHGSLKVE GMVAIVQLGP EWHGMLYSQA DSKKKSNLMM 351 400 bmy_12698T0/1-358 SLFEPGPEPL PWLGKMAQLG PISDAKENPY GEDDNKSPFP LQPKNKRSYA ENSP00000408429/1-461 SLFEPGPEPL PWLGKMAQLG PISDAKENPY GEDDNKSPFP LQPKNKRSYA ENSTTRP00000011259/1-487 SLFEPGPEPL PWLGKMAQLG PISDAKENPY GEDDNKSPFP LQPKNKRSYA ENSBTAP00000020164/1-518 SLFEPGPEPL PWLGKMVQLG PISDAKENPY GEDDNKSPFP LQPKNKRSYA 401 450 bmy_12698T0/1-358 QNVTVWIKPS GLQTDVQKIL RNARKLPEKT QTFYKELNRL RKAALAFGFL ENSP00000408429/1-461 QNVTVWIKPS GLQTDVQKIL RNARKLPEKT QTFYKELNRL RKAALAFGFL ENSTTRP00000011259/1-487 QNVTVWIKPS GLQTDVQKIL RNARKLPEKT QTFYKELNRL RKAALAFGFL ENSBTAP00000020164/1-518 QNVTVWIKPS GLQTDVQKIL RNARKLPEKT QTFYKELNRL RKAALAFGFL 451 500 bmy_12698T0/1-358 DLLKGVADML ERECTLLPDT AHPDAAFQLT HAAQQLKLAS TGTSEYAGYD ENSP00000408429/1-461 DLLKGVADML ERECTLLPET AHPDAAFQLT HAAQQLKLAS TGTSEYAAYD ENSTTRP00000011259/1-487 DLLKGVADML ERECTLLPDT AHPDAAFQLT HAAQQLKLAS TGTSEYAGYD ENSBTAP00000020164/1-518 DLLKGVADML ERECTLLPDT AHPDAAFQLT HAAQQLKLAS TGTSEYAGYD 501 550 bmy_12698T0/1-358 HNITPLQTDF SGSSAERM ENSP00000408429/1-461 QNITPLHTDF SGSSTERI ENSTTRP00000011259/1-487 HNITPLQTDF SGSSAERM ENSBTAP00000020164/1-518 HNITPLQTDF SGSSAERI