KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:34 2014 Check: 00 .. Name: ENSP00000369461/1-394 Len: 396 Check: 4580 Weight: 1.00 Name: ENSBTAP00000020196/1-374 Len: 396 Check: 3545 Weight: 1.00 Name: ENSTTRP00000011970/1-396 Len: 396 Check: 1273 Weight: 1.00 Name: bmy_16005T0/1-290 Len: 396 Check: 3090 Weight: 1.00 Name: BACU005118/1-359 Len: 396 Check: 9715 Weight: 1.00 // 1 50 ENSP00000369461/1-394 --MAMAYLAW RLARRSCPSS LQVTSFPVVQ LHMNRTAMRA SQKDFENSMN ENSBTAP00000020196/1-374 ---------- ---------P LQV---PALG LHVRGPAMLA SQKDFNNAVS ENSTTRP00000011970/1-396 MAGVAGRLAR LWCSGALSSP LQVTRFPALQ LHLCGPAMRA SQKDFENALN bmy_16005T0/1-290 ---------- ---------- ---------- -------MRA SQKDFENAMN BACU005118/1-359 ---------- ---------- ---------- -------MRA SQKDFENAMN 51 100 ENSP00000369461/1-394 QVKLLKKDPG NEVKLKLYAL YKQATEGPCN MPKPGVFDLI NKAKWDAWNA ENSBTAP00000020196/1-374 QVKLLKEDPG NEVKLKLYAL YKQATEGPCN VPKPGMLDFI NKTKWDAWNA ENSTTRP00000011970/1-396 QVKLLKKDPG NEVKLKLYAL YKQATEGPCN VPKPGVLDFI NKAKWDAWNA bmy_16005T0/1-290 QVKLLKKDPG NEVKLKLYAL YKQATEGPCN VPKPGVLDFI NKAKWDAWHA BACU005118/1-359 QVKLLKKDPG NEVKLKLYAL YKQATEGPCN VPRPGVLDFI NKAKWDAWHA 101 150 ENSP00000369461/1-394 LGSLPKEAAR QNYVDLVSSL SPSLESSSQV EPGTDRKSTG FETLVVTSED ENSBTAP00000020196/1-374 LGSLSKEAAR QNYVDLVSRL SASSESPSPE APAADRKQPE SDSLVVTSED ENSTTRP00000011970/1-396 LGSLPKETAR RNYVDLVSSL SASSESSIQV TPAADRKQPG SDALVVTSQD bmy_16005T0/1-290 LGSLPKETAR QNYVDVVSSL SASSESSGQV TPAADRKQPG SDALVVTSQD BACU005118/1-359 LGSLPKETAR QNYVDLVSSL SASSESSGQV TPAADRKQPG SDALVVTSQD 151 200 ENSP00000369461/1-394 GITKIMFNRP KKKNAINTEM YHEIMRALKA ASKDDSIITV LTGNGDYYSS ENSBTAP00000020196/1-374 GITTIRLNRP AKKNALTTQM YHDIIAALQA ASKDESAITV LTGSGDYYCS ENSTTRP00000011970/1-396 GITTITLNRP DKKNALTTQM YHDIILALEA ASKDDSAITV LTGNGDYYCS bmy_16005T0/1-290 GITTITLNRP DKKNALT--- ---------- ---------- ---------- BACU005118/1-359 GITTITLNRP DKKNALTPQM YHDIMLALEA ASKDDSAITV LTGNGDYYCS 201 250 ENSP00000369461/1-394 GNDLTNFTDI PPGGVEEKAK NNAVLLREFV GCFIDFPKPL IAVVNGPAVG ENSBTAP00000020196/1-374 GNDLTNFTHL PAGGLEEMAR SAAALLRDFV NCFIDFPKPL VAVVNGPAVG ENSTTRP00000011970/1-396 GNDLTNFTDI PPGGVEEKAR SGAVLLRDFV DCFIDFPKPL VAVVNGPAVG bmy_16005T0/1-290 ---------- ---------- ---------- ------PQPL VAVVNGPAVG BACU005118/1-359 GNDLTNFTDI PPGEVEERAR SGAVLLRDFV DCFIDFPKPL VAVVNGPAVG 251 300 ENSP00000369461/1-394 ISVTLLGLFD AVYASDRATF HTPFSHLGQS PEGCSSYTFP KIMSPAKATE ENSBTAP00000020196/1-374 ISVTILGLFD VVYATDRASF HTPFSHLGQS PEGCSSYTFP KIMGSSKAAE ENSTTRP00000011970/1-396 ISVTILGLFD IVYATDRATF HTPFSHLGQS PEGCSSYTFP KIMGPSKATE bmy_16005T0/1-290 ISVTILGLFD IVYATDRATF HTPFSHLGQS PEGCSSYTFP KIMGPSKATE BACU005118/1-359 ISVTLLGLFD VVYATDRATF HTPFSHLGQS PEGCSSYTFP KMMGPSKATE 301 350 ENSP00000369461/1-394 MLIFGKKLTA GEACAQGLVT EVFPDSTFQK EVWTRLKAFA KLPPNALRIS ENSBTAP00000020196/1-374 MLLFGKKLTA QEACAQGLVT EVFPDGTFQK EVWARLKAYS KLPPNAMRIS ENSTTRP00000011970/1-396 MLVFGKKLTA REACTQGLVT EVFPDSTFQK EVWVRLKAYS KLPPNAMRIS bmy_16005T0/1-290 MLVFGKKLTA REACTQGLVT EVFPDSTFQK EVWVRLKAYS KLPXNAMRIS BACU005118/1-359 MLVFGKKLTA REACTQGLVT EVFPDSTFQK EVWVRLKAYS KLPPNAMRIS 351 400 ENSP00000369461/1-394 KEVIRKRERE KLHAVNAEEC NVLQGRWLSD ECTNAVVNFL SRKSKL ENSBTAP00000020196/1-374 KQIIRNREKE KLHAVNAEES SVLRERWQSD ECMNAIASFL SRKAKL ENSTTRP00000011970/1-396 KQVIRNTEKE KLHAINAEES NVLRERWLSD ECMNAVVSFL SKKAKL bmy_16005T0/1-290 KQVIRNREKE KLHAINAEES SILQERWLSD ECMNAIVNFL SKKAKL BACU005118/1-359 KQVIRNREKE KLHAINAEES SILQERWLSD ECMNAIVNFL SKKAKL