KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:10:35 2014  Check: 00 ..

 Name: bmy_03676T0/1-220         Len:    403  Check:  6121  Weight:  1.00
 Name: ENSTTRP00000002809/1-291  Len:    403  Check:  9801  Weight:  1.00
 Name: ENSP00000335247/1-291     Len:    403  Check:  6687  Weight:  1.00
 Name: BACU004967/1-403          Len:    403  Check:  1578  Weight:  1.00
 Name: ENSBTAP00000020202/1-291  Len:    403  Check:  7880  Weight:  1.00

//


                          1                                                   50
bmy_03676T0/1-220         ---------- ---------- ---------- ---------- ---------- 
ENSTTRP00000002809/1-291  ---------- ---------- ---------- ---------- ---------- 
ENSP00000335247/1-291     ---------- ---------- ---------- ---------- ---------- 
BACU004967/1-403          MLGLKASVNT KERLRKRSAS GWTRGGALAK RGLRNHLSTL VLPGDITQVI 
ENSBTAP00000020202/1-291  ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
bmy_03676T0/1-220         ---------- ---------- ---------- ---------- ---------- 
ENSTTRP00000002809/1-291  ---------- ---------- ---------- ---------- ---------- 
ENSP00000335247/1-291     ---------- ---------- ---------- ---------- ---------- 
BACU004967/1-403          AQSSRTVPPG YCLFTLGNLG IFSNQTQGPW KVASASAAAS TLLELPRRTQ 
ENSBTAP00000020202/1-291  ---------- ---------- ---------- ---------- ---------- 


                          101                                                150
bmy_03676T0/1-220         ---------- ---------- --MKFRDLEG TD-------- --KEIQCMAV 
ENSTTRP00000002809/1-291  ---------- --MEKSAASN DPHGPRPVLG RDCVQVPDYH HFPTFRSQCE 
ENSP00000335247/1-291     ---------- --MEKLAAST EPQGPRPVLG RESVQVPDDQ DFRSFRSECE 
BACU004967/1-403          ESRTRTRALG FPMEKSAAST ELQGPRPVLG RDSVQVPDDQ DFRSFRSECE 
ENSBTAP00000020202/1-291  ---------- --MEQSAVSP EPPGPRPVLG RDSVQVPDDQ DFRSFRSECE 


                          151                                                200
bmy_03676T0/1-220         QKVGWVIQ-- ----EDFLEE TGMNG----- ECRMECRDVP AETLYDVLHD 
ENSTTRP00000002809/1-291  AYEVWNLTYM KGGVSVWVKD VDMDPTLHNI FCRMECRDVP AETLYDVLHD 
ENSP00000335247/1-291     AEVGWNLTYS RAGVSVWVQA VEMDRTLHKI KCRMECCDVP AETLYDVLHD 
BACU004967/1-403          AEAGWNLTYS KAGVSVWVQA VEMDRTLHKI KCRMECRDVP AETLYDVLHD 
ENSBTAP00000020202/1-291  AEAGWNLTYS KAGVSVWVQA VEMDRTLHKI KCRMECRDVP AETLYDVLHD 


                          201                                                250
bmy_03676T0/1-220         IEYRKKWDSN VIETFDIARL TVNAD----- ---------- ---------- 
ENSTTRP00000002809/1-291  IEYRKKWDSN VIETFDIARL TVNADVGYYS WRCPKPLKNR DVITLRSWLP 
ENSP00000335247/1-291     IEYRKKWDSN VIETFDIARL TVNADVGYYS WRCPKPLKNR DVITLRSWLP 
BACU004967/1-403          IEYRKKWDSN VIETFDIARL TVNADVGYYS WRCPKPLKNR DVITLRSWLP 
ENSBTAP00000020202/1-291  IEYRKKWDSN VIETFDIARL TVNADVGYYS WRCPKPLKNR DVITLRSWLP 


                          251                                                300
bmy_03676T0/1-220         ---------- -----KYPPR KDLVRAVSIQ TGYLIQSTGP KSCVITYLAQ 
ENSTTRP00000002809/1-291  MGTDYIIMNY SVKHPKYPPR KDLVRAVSIQ TGYLIQSTGP KSCVITYMAQ 
ENSP00000335247/1-291     MGADYIIMNY SVKHPKYPPR KDLVRAVSIQ TGYLIQSTGP KSCVITYLAQ 
BACU004967/1-403          MGTDYIIMNY SVKHPKYPPR KDLVRAVSIQ TGYLIQSTGP KSCVITYLAQ 
ENSBTAP00000020202/1-291  MGTDYIIMNY SVKHPKYPPR KDLVRAVSIQ TGYLIQSTGP KSCVITYLAQ 


                          301                                                350
bmy_03676T0/1-220         VDPKGSLPKW VVNKSSQFLA PKAMKKMYKA CVKYPEWKQK HQPHFKPWLH 
ENSTTRP00000002809/1-291  VDPKGSLPKW VVNKSSQFLA PKAMKKMYKA CVKYPEWKQK HQPHFKPWLH 
ENSP00000335247/1-291     VDPKGSLPKW VVNKSSQFLA PKAMKKMYKA CLKYPEWKQK HLPHFKPWLH 
BACU004967/1-403          VDPKGSLPKW VVNKSSQFLA PKAMKKMYKA CVKYPEWKQK HQPHYKPWLH 
ENSBTAP00000020202/1-291  VDPKGSLPKW VVNKSSQFLA PKAMKKMYKA CVKYPEWKQK HQPHFKPWLH 


                          351                                                400
bmy_03676T0/1-220         PEQSPLPSLA LSELSVQHAD SLENIDESAV AESREERMGS AGGEGSDDDT 
ENSTTRP00000002809/1-291  PEQSPLPSLA LSELSVQHAD SLENIDESAV AESREERVGS AGGEGSDDDT 
ENSP00000335247/1-291     PEQSPLPSLA LSELSVQHAD SLENIDESAV AESREERMGG AGGEGSDDDT 
BACU004967/1-403          PEQSPLPSLA LSELSVQHAD SLENIDESAV AESREERMGS AGGEGSDDDT 
ENSBTAP00000020202/1-291  PEQSSLPSLA LSELSVQHAD SLENIDESAV AESREDRTGS AGGEGSDDDT 


                          401                                                450
bmy_03676T0/1-220         SLT 
ENSTTRP00000002809/1-291  SLT 
ENSP00000335247/1-291     SLT 
BACU004967/1-403          SLT 
ENSBTAP00000020202/1-291  SLT