KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:36 2014 Check: 00 .. Name: ENSBTAP00000020206/1-639 Len: 639 Check: 6516 Weight: 1.00 Name: ENSP00000263383/1-632 Len: 639 Check: 2494 Weight: 1.00 Name: ENSTTRP00000014607/1-585 Len: 639 Check: 734 Weight: 1.00 Name: bmy_19191T0/1-632 Len: 639 Check: 4662 Weight: 1.00 Name: BACU004865/1-632 Len: 639 Check: 3471 Weight: 1.00 // 1 50 ENSBTAP00000020206/1-639 LRSRCQLMET AVAAAPAWGF FSSFLLLAFG TLVAALLGAA HRLGLFYQLM ENSP00000263383/1-632 -------MET PAAAAPAGSL FPSFLLLACG TLVAALLGAA HRLGLFYQLL ENSTTRP00000014607/1-585 ---------- ---------- ---------- ---------- ---------- bmy_19191T0/1-632 -------MET PVAAAPAGDF FPSFLLLGFA TLVAALLGAA HRLGLFYQLM BACU004865/1-632 -------MET PVAAAPAGDF FPSFLLLGFA TLVAALLGAA HRLGLFYQLM 51 100 ENSBTAP00000020206/1-639 HKVDTASTRH GGENVAAVLK AHGVRFLFTL VGGHISPLLV ACEKLGIRVV ENSP00000263383/1-632 HKVDKASVRH GGENVAAVLR AHGVRFIFTL VGGHISPLLV ACEKLGIRVV ENSTTRP00000014607/1-585 --VDKASIRH GGENVAAVLR AHGVRFLFTL VGGHISPLLV ACEKLGIRVV bmy_19191T0/1-632 HKVDKASIRY GGENVAAVLR AHGVQFLFTL VGGHISPLLV ACEKLGIRVV BACU004865/1-632 HKVDKASIRH GGENVAAVLR AHGVRFLFTL VGGHISPLLV ACEKLGIRVV 101 150 ENSBTAP00000020206/1-639 DTRHEVTAVF AADAVARLTG TVGVAAVTAG PGLTNTVTAV KNAQIAQSPV ENSP00000263383/1-632 DTRHEVTAVF AADAMARLSG TVGVAAVTAG PGLTNTVTAV KNAQMAQSPI ENSTTRP00000014607/1-585 DTRHEVTAVF AADAVARLTG TVGVVAVTAG PGLTNTVTAV KNAQIAQSPV bmy_19191T0/1-632 DTRHEVTAVF AADAVARLTG TVGVAAVTAG PGLTNTVTAV KNAQIAQSPV BACU004865/1-632 DTRHEVTAVF AADAVARLTG TVGVAAVTAG PGLTNTVTAV KNAQIAQSPV 151 200 ENSBTAP00000020206/1-639 LLLGGAASTL LQNRGALQAI DQIALFRPLC KFCASVRRVR DIIPTLRAAM ENSP00000263383/1-632 LLLGGAASTL LQNRGALQAV DQLSLFRPLC KFCVSVRRVR DIVPTLRAAM ENSTTRP00000014607/1-585 LLLGGAASTL LQNRGALQAI DQMSLFRPLC KFCASVQRVR EIIPTLRAAM bmy_19191T0/1-632 LLLGGAASTL LQNRGALQAI DQMSLFRPLC KFCASVQRVX EIIPTLRAAM BACU004865/1-632 LLLGGAASTL LQNRGALQAI DQMSLFRPLC KFCASVQRVR EIIPTLRAAM 201 250 ENSBTAP00000020206/1-639 AAAQSGTPGP VFVELPLDVL YPYFMVQKEM VPAKPPKGLM SRAVHWYLAN ENSP00000263383/1-632 AAAQSGTPGP VFVELPVDVL YPYFMVQKEM VPAKPPKGLV GRVVSWYLEN ENSTTRP00000014607/1-585 AAAQSGTPGP VFVELPIDVL YPYFMVQKEM VPAKPPKGLV GQGVSWYLEN bmy_19191T0/1-632 AAAQSGTPGP VFVELPIDVL YPYFMVQKEM VSAKPPKGLV GQGVSWYLEN BACU004865/1-632 AAAQSGTPGP VFVELPIDVL YPYFMVQKEM VSAKPPKGLV GQGVSWYLEN 251 300 ENSBTAP00000020206/1-639 SLANLFAGAW EPQPEGPLPL DIPQASPQQV QRCVEILSRA KKPLMLIGSQ ENSP00000263383/1-632 YLANLFAGAW EPQPEGPLPL DIPQASPQQV QRCVEILSRA KRPLMVLGSQ ENSTTRP00000014607/1-585 YLANLFAGAW EPQPEGPLPL DIPQASPQQV QRCVEILSRA KRPLVLLGSQ bmy_19191T0/1-632 YLANLFAGAW EPQPEGPLPL DIPQASPQQV QRCVEILSRA KRPLVLLGSQ BACU004865/1-632 YLANLFAGAW EPQPEGPLPL DIPQASPQQV QRCVEILSRA KRPLVLLGSQ 301 350 ENSBTAP00000020206/1-639 ALLPPTSSDK LRVAVETLGI PCFLAGMARG LLGRNHPLHF RQNRRAALKK ENSP00000263383/1-632 ALLTPTSADK LRAAVETLGV PCFLGGMARG LLGRNHPLHI RENRSAALKK ENSTTRP00000014607/1-585 ALLPPTPSDK LRVAVETLG- PCFLGGMARG LLGRSHPF-I RQNRSAALKK bmy_19191T0/1-632 ALLPPTPSDK LRVAVETLGV PCFLGGMARG LLGRSHPLHI RQNRSAALKK BACU004865/1-632 ALLPPTPSDK LRVAVETLGV PCFLGGMARG LLGRSHPLHI RQNRSAALKK 351 400 ENSBTAP00000020206/1-639 ADVVVLAGAV CDFRLSYGRV LSRSSKIIVV NRDRKEMLIN SDIFWKPQEA ENSP00000263383/1-632 ADVIVLAGTV CDFRLSYGRV LSHSSKIIIV NRNREEMLLN SDIFWKPQEA ENSTTRP00000014607/1-585 ADVVVLAGTV CDFRLSYGRV LSRSSKIIIV NRNRKEMLMN SDMFWKPQEA bmy_19191T0/1-632 ADVVVLAGTV CDFRLSYGRV LSRSSKXIIV NRNRKEMLMN SDMFWKPQVA BACU004865/1-632 ADVVVLAGTV CDFRLSYGRV LSRSSKIIIV NRNRKEMLMN SDMFWKPQVA 401 450 ENSBTAP00000020206/1-639 VQGDVGSFVV KLVEGLRGQM WASDWAEELR QADQQKEQAF REKALMPVAQ ENSP00000263383/1-632 VQGDVGSFVL KLVEGLQGQT WAPDWVEELR EADRQKEQTF REKAAMPVAQ ENSTTRP00000014607/1-585 VQGDVGSFMV KLAQGLQGQT WASDWAEELR QADRQKEQTF REKASMPVAE bmy_19191T0/1-632 VQGDVGSFVV KLAQGLQGQT WASDWAEELR QADRQKEQTF REKASMPVAE BACU004865/1-632 VQGDVGSFVV KLAQGLQGQT WASDWAEELR QADRQKEQTF REKASMPVAE 451 500 ENSBTAP00000020206/1-639 HLNPVRVLQL VEDTLPDNSI LVVDGGDFVG TAAYLVQPRG PLRWLDPGAF ENSP00000263383/1-632 HLNPVQVLQL VEETLPDNSI LVVDGGDFVG TAAHLVQPRG PLRWLDPGAF ENSTTRP00000014607/1-585 HLNPVRVLQL VEETLPDNSI LVVDGGDFVG TAAHLVQPRG PLRWLDPGAF bmy_19191T0/1-632 HLNPVRVLQL VEETLPDNSI LVVDGGDFVG TAAHLVQPRG PLRWLDPGAF BACU004865/1-632 HLNPVRVLQL VEETLPDNSI LVVDGGDFVG TAAHLVQPRG PLRWLDPGAF 501 550 ENSBTAP00000020206/1-639 GTLGVGAGFA LGAKLCRPDA EVWCLFGDGA FGYSLIEFDT FVRHKIPVMA ENSP00000263383/1-632 GTLGVGAGFA LGAKLCRPDA EVWCLFGDGA FGYSLIEFDT FVRHKIPVMA ENSTTRP00000014607/1-585 GTLGVGAGFA LGAKLCQPDA EVWCLFGDGA FGYSLIEFDT FVRHKIPVMA bmy_19191T0/1-632 GTLGVGAGFA LGAKLCQPDA EVWCLFGDGA FGYSLIEFDT FVRHKIPVMA BACU004865/1-632 GTLGVGAGFA LGAKLCQPEA EVWCLFGDGA FGYSLIEFDT FVRHKIPVMA 551 600 ENSBTAP00000020206/1-639 LIGNDAGWTQ ISREQVPSLG SNVACGLAYT DYHKAAQGLG AQGLLLSREN ENSP00000263383/1-632 LVGNDAGWTQ ISREQVPSLG SNVACGLAYT DYHKAAMGLG ARGLLLSREN ENSTTRP00000014607/1-585 LIGNDAGWTQ ISREQVPCLG SNVACGLAYT GYHKAAMGLG AQGLLLSRES bmy_19191T0/1-632 LIGNDAGWTQ ISREQVPCLG SNVACGLAYT GYHEAAMGLG AQGLLLSRES BACU004865/1-632 LIGNDAGWTQ ISREQVPCLG SNVACGLAYT GYHKAAMGLG AQGLLLSRES 601 650 ENSBTAP00000020206/1-639 EDQVVKVLRD AQQWCQDGHP VVVNILIGRT DFRDGSIAM ENSP00000263383/1-632 EDQVVKVLHD AQQQCRDGHP VVVNILIGRT DFRDGSIAV ENSTTRP00000014607/1-585 EDQVVKVLHD AQQQCQDGHP VVVNILIGRT DFRDGSIAV bmy_19191T0/1-632 EDQVVKVLHE AQQQCQDGHP VVVNILIGRT DFRDGSIAV BACU004865/1-632 EDQVVKVLHE AQQQCQGGHP VVVNILIGRT DFRDGSIAV