KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:10:37 2014 Check: 00 .. Name: ENSBTAP00000020207/1-275 Len: 346 Check: 9725 Weight: 1.00 Name: ENSP00000419923/1-283 Len: 346 Check: 975 Weight: 1.00 Name: bmy_02402T0/1-317 Len: 346 Check: 8742 Weight: 1.00 Name: BACU001787/1-344 Len: 346 Check: 8238 Weight: 1.00 // 1 50 ENSBTAP00000020207/1-275 ---------- ---------- ---------- ----MDVLPM CSIFQELQIV ENSP00000419923/1-283 ---------- ---------- ---------- ----MDVLPM CSIFQELQIV bmy_02402T0/1-317 MNFPGAAGTA AALPTPDRTP PCFYNSSDCL FQPDMDVLPM CSIFQELQIV BACU001787/1-344 MNFPGAAGTA AALPTPDRTP PCFYNSSDCL FQPDMDVLPM CSIFQELQIV 51 100 ENSBTAP00000020207/1-275 HETGYFSALP SLEEYWQQTC LELERYLQSE PCYVSASEIK FDSQEDLWTK ENSP00000419923/1-283 HETGYFSALP SLEEYWQQTC LELERYLQSE PCYVSASEIK FDSQEDLWTK bmy_02402T0/1-317 HETGYFSALP SLEEYWQQTC LELERYLQSE PCYVSASEIK FDSQEDLWTK BACU001787/1-344 HETGYFSALP SLEEYWQQTC LELERYLQSE PCYVSASEIK FDSQEDLWTK 101 150 ENSBTAP00000020207/1-275 IILAREKKED ADLKVSSSGP PEDALHSPGF SYNLETNSLN SDVSSESSDS ENSP00000419923/1-283 IILAREKKEE SELKISSS-P PEDTLISPSF CYNLETNSLN SDVSSESSDS bmy_02402T0/1-317 IILAREKKED SDLKMSSS-P PEDALNSPGF GYNLETNSLN SDVSSESSDS BACU001787/1-344 IILAREKKED SDLKMSSS-P PEDALNSPGF GYNLETNSLN SDVSSESSDS 151 200 ENSBTAP00000020207/1-275 SEELSPTTKF TSDPISEVLV NSGNLSSSVT STPPSSPELS REPSHLWGCV ENSP00000419923/1-283 SEELSPTAKF TSDPIGEVLV SSGKLSSSVT STPPSSPELS REPSQLWGCV bmy_02402T0/1-317 SEELSPTTKF TSDPIGEVLV NSGNLSSSVT STPPSSPELS REPSHLWGCM BACU001787/1-344 SEELSPTTKF TSDPIGEVLV NSGNLSSSVT STPPSSPELS REPSHLWGCM 201 250 ENSBTAP00000020207/1-275 PGELHPPGKA RGGTSGKPGD KGSGDASPDG RRRVHRCHFN GCRKVYTKSS ENSP00000419923/1-283 PGELPSPGKV RSGTSGKPGD KGNGDASPDG RRRVHRCHFN GCRKVYTKSS bmy_02402T0/1-317 PGELHPPGKA RSGTAGKPGD KGSGDASPDG RRRVHRCHFN GCRKVYTKSS BACU001787/1-344 PGELHPPGKA RSGTAGKPGD KGSGDASPDG RRRVHRCHFN GCRKVYTKSS 251 300 ENSBTAP00000020207/1-275 HLKAHQRTHT GQSLLRPGRW GAAEFHPPWE GAGQEALGAD TSSPPF---- ENSP00000419923/1-283 HLKAHQRTHT GEKPYRCS-W EGCEWRFARS DELTRHFRKH TGAKPFKCSH bmy_02402T0/1-317 HLKAHQRTHT GEKPYRCS-W EGCEWRFARS DELTRHFRKH TGAKPFKCSH BACU001787/1-344 HLKAHQRTHT GEKPYRCS-W EGCEWRFARS DELTRHFRKH TGAKPFKCSH 301 350 ENSBTAP00000020207/1-275 ---------- -----FPPEK VGSLGRTE-- ---------- ------ ENSP00000419923/1-283 CDRC------ -----FSRSD HLALHMKRHL ---------- ------ bmy_02402T0/1-317 CDR------- -----YVHEQ QGRGGAIPGA K--------- ------ BACU001787/1-344 CDSCPRPKPI SPSRFYNRSK SEFSQQIPPL LPLQFATRTR ENKSSY