KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:37 2014 Check: 00 .. Name: bmy_05186T0/1-690 Len: 711 Check: 4597 Weight: 1.00 Name: BACU019507/1-627 Len: 711 Check: 1892 Weight: 1.00 Name: ENSTTRP00000008393/1-657 Len: 711 Check: 689 Weight: 1.00 Name: ENSP00000269221/1-657 Len: 711 Check: 4719 Weight: 1.00 Name: ENSBTAP00000020214/1-658 Len: 711 Check: 9271 Weight: 1.00 // 1 50 bmy_05186T0/1-690 MGEEDYYLEL CERPVHFEKA NPVNCVFFDE ANKQIRVDAK PLQFAMRHVS BACU019507/1-627 ---------- ---------- ---------- ---Q------ ---------- ENSTTRP00000008393/1-657 MGEEDYYLEL CERPVHFEKV NPVNCVFFYE ANKQ------ ---------- ENSP00000269221/1-657 MGEEDYYLEL CERPVQFEKA NPVNCVFFDE ANKQ------ ---------- ENSBTAP00000020214/1-658 MGEEDYYLEL CERPVHFEKA NPVNCVFFDE ANKQ------ ---------- 51 100 bmy_05186T0/1-690 LVEPTVFAVR SGGATGVVVK GPDDRNPISF RMEDKGEVKC IKFSLENKIL BACU019507/1-627 -----VFAVR SGGATGVVVK GPDDRNPISF RMEDKGEVKC IKFSLENKIL ENSTTRP00000008393/1-657 -----VFAVR SGGATGVVVK GPDDRNPISF RMEDKGEVKC IKFSLENKIL ENSP00000269221/1-657 -----VFAVR SGGATGVVVK GPDDRNPISF RMDDKGEVKC IKFSLENKIL ENSBTAP00000020214/1-658 -----VFAVR SGGATGVVVK GPDDRNPISF RMEDKGEVKC IKFSLENKIL 101 150 bmy_05186T0/1-690 AVQRTSKTVV RHIFKYSMKK RTLEVHLEEN ELENSSVKGT IYYFNVMEAV BACU019507/1-627 AVQRTSKTVD FSNFT----- ------PDSP QLEYTQ---- -------ECK ENSTTRP00000008393/1-657 AVQRTSKTVD FSNFT----- ------PDSS QLEYTQ---- -------ECK ENSP00000269221/1-657 AVQRTSKTVD FCNFI----- ------PDNS QLEYTQ---- -------ECK ENSBTAP00000020214/1-658 AVQRTSKTVD FSNFI----- ------PDSS QLEYTQ---- -------ECK 151 200 bmy_05186T0/1-690 TKNANILGFC WTSSTEIVFI TDQGIEFYQV LYHLRVLEKE KRNLKLLKSQ BACU019507/1-627 TKNANILGFC WTSSTEIVFI TDQGIEFYQV L-------PE KRNLKLLKSQ ENSTTRP00000008393/1-657 TKNANILGFC WTSSTEIVFI TDQGIEFYQV L-------PE KRNLKLLKSQ ENSP00000269221/1-657 TKNANILGFC WTSSTEIVFI TDQGIEFYQV L-------PE KRSLKLLKSH ENSBTAP00000020214/1-658 TKNANILGFC WTSSTEIVFI TDQGIEFYQV L-------PE KRNLKLLKSQ 201 250 bmy_05186T0/1-690 NINVNWYMYC PESAVILLST TVLGNVLQPF YFRAGTMSKL PKFEIELPAA BACU019507/1-627 NINVNWYMYC PESAVILLST TVLGNVLQPF YFRAGTMSKL PKFEIELPAA ENSTTRP00000008393/1-657 NINVNWYMYC PESAVILLST TVLGNVLQPF YFRAGTMSKL PKFEIELPAA ENSP00000269221/1-657 NLNVNWYMYC PESAVILLST TVLENVLQPF HFRAGTMSKL PKFEIELPAA ENSBTAP00000020214/1-658 NINVNWYMYC PEGSVILLST TVLGNVLQPF YFRAGTMSKL PKFEIELPAA 251 300 bmy_05186T0/1-690 PKSTKLSLSE RDIAMATILS IYFLTFLLSY ---------- -------REG BACU019507/1-627 PKSTKLSLSE RDIAMATIYG QLYVLFLRHH SRTSNSTGAE VVLYHLPREG ENSTTRP00000008393/1-657 PKSTKLSLSE RDIAMATIYG QLYVLFLRHH SRTSNSTGAE VVLYHLPREG ENSP00000269221/1-657 PKSTKPSLSE RDIAMATIYG QLYVLFLRHH SRTSNSTGAE VVLYHLPREG ENSBTAP00000020214/1-658 PKSTKLSLSE RDIAMATIYG QLYVLFLRHH SRTSNSAGAE VVLYHLPREG 301 350 bmy_05186T0/1-690 ACKKMHILKL NRTGKFALNV VDNLVVVHHQ DTETSVIFDI KLRGDFDGTV BACU019507/1-627 ACKKMHILKL NRTGKFALNV VDNLVVVHHQ DTETSVIFDI KLRGEFDGTV ENSTTRP00000008393/1-657 ACKKMHILKL NRTGKFALNV VDNLVVVHHQ DTETSVIFDI KLRGEFDGTV ENSP00000269221/1-657 ACKKMHILKL NRTGKFALNV VDNLVVVHHQ DTETSVIFDI KLRGEFDGSV ENSBTAP00000020214/1-658 ACKKMHILKL NRTGKFALNV VDNLVVVHHQ DTETSVIFDI RLRGEFDGSV 351 400 bmy_05186T0/1-690 TLHHPVLPAR SIQPYQIPVA GPAPVTSQSP IPCK-LYSSS W---IVFQPD BACU019507/1-627 TLHHPVLPAR SIQPYQIPVA GPAPVTSQSP IPCK-LCILS KGLGQAQQGS ENSTTRP00000008393/1-657 TLHHPVLPAR SIQPYQIPVA GPAPVTSQSP IPCK-LXXXX X---XXXXXX ENSP00000269221/1-657 TFHHPVLPAR SIQPYQIPIT GPAAVTSQSP VPCK-LYSSS W---IVFQPD ENSBTAP00000020214/1-658 TLHHPVLPAR SIQPYQIPAA GPAPVTSQSP VPCKRVDSSS W---IVFQPD 401 450 bmy_05186T0/1-690 IIISASQGYL WNLQVKLQPI VNLLPDKGRL MDFLLQRREC KTVVLSVCSQ BACU019507/1-627 CHLSLHWGYL WNLQVKLQPI VNLLPDKGRL MDFLLQRREC KTVVLSVCSQ ENSTTRP00000008393/1-657 XXXXXXXXYL WNLQVKLQPI VNLLPDKGRL MDFLLQRREC KTVVLSVCSQ ENSP00000269221/1-657 IIISASQGYL WNLQVKLEPI VNLLPDKGRL MDFLLQRKEC KMVILSVCSQ ENSBTAP00000020214/1-658 IIISASQGYL WNLQVKLQPI VNLLPDKGRL MDFLLQRKEC KMVILSVCSQ 451 500 bmy_05186T0/1-690 MLTESDRATL PVIATVFDKL NQEYKKYLDA EQSYTLALEV GQSRSGPLLR BACU019507/1-627 MLTESDRATL PVIATVFDKL NQEYKKYLDA EQSYTLALEV GQSRSGPLLR ENSTTRP00000008393/1-657 MLTESDRATL PVIATVFDKL NQEYKKYLDA EQSYTLALEA GQSRSGPFLR ENSP00000269221/1-657 MLSESDRASL PVIATVFDKL NHEYKKYLDA EQSYAMAVEA GQSRSSPLLK ENSBTAP00000020214/1-658 MLTESDRATL PVIATVFDKL NQEYKKYLDA EQNYTMAVEA GQSRSGPLLR 501 550 bmy_05186T0/1-690 RPVRTQAVVD QSDMYTHVLS AFTEKKEMPQ KFVIAVLMEY IRSLNQFQIT BACU019507/1-627 RPARTQAVVD QSDMYTHVLS AFTEKKEMPQ KFVVAVLMEY IRSLNQFQIT ENSTTRP00000008393/1-657 RPARTQAVVD QSDMYTHVLS AFAEKKEMPQ KFMIAVLMEY IRSLNQFQIT ENSP00000269221/1-657 RPVRTQAVLD QSDVYTHVLS AFVEKKEMPH KFVIAVLMEY IRSLNQFQIA ENSBTAP00000020214/1-658 RPVRTQAVVD QSDMYTHVLS VFTEKKETPH KFVIAVLMEY IRSLNQFQIT 551 600 bmy_05186T0/1-690 VQHYLHELVI KTLVQHNLFY TLHQFLQYHV LSDSKPLACL LLSLESFYPP BACU019507/1-627 VQHYLHELVI KTLVQHNLFY TLHQFLQYHV LSDSKPLACL LLSLESFYPP ENSTTRP00000008393/1-657 VQHYLHELVI KTLVQHNLFY TLHQFLQYHV LSDSKPLACL LLSLESFYPP ENSP00000269221/1-657 VQHYLHELVI KTLVQHNLFY MLHQFLQYHV LSDSKPLACL LLSLESFYPP ENSBTAP00000020214/1-658 VQHYLHELVI RTLVQHSLFS TLHQFLQYHV LSDSKPLACL LLSLESFYPP 601 650 bmy_05186T0/1-690 AHQLSLDMLK RLSTANDEIV EVLLSKHQVL AALRFIRGIG GHDNISARKF BACU019507/1-627 AHQLSLDMLK RLSTANDEIV EVLLSKHQVL AALRFIRGIG GHDNISARKF ENSTTRP00000008393/1-657 AHQLSLDMLK RLSTANDEIV EVLLSKHQVL AALRFIRGIG GHDNISARKF ENSP00000269221/1-657 AHQLSLDMLK RLSTANDEIV EVLLSKHQVL AALRFIRGIG GHDNISARKF ENSBTAP00000020214/1-658 AHQLSLDMLK RLSTANDEIV EVLLSKHQVL AALRFIRGIG GHDNISARKF 651 700 bmy_05186T0/1-690 LDAAKQTEDH MLFYTIFRFF EQRNQRLRGN PSFTPGEHCE EHVAFFKQVF BACU019507/1-627 LDAAKQTEDR MLFYTIFRFF EQRNQRLRGN PSFTPGEHCE EHVAFFKQVF ENSTTRP00000008393/1-657 LDAAKQTEDH MLFYTIFRFF EQRNQRLRGN PSFTPGEHCE EHVAFFKQVF ENSP00000269221/1-657 LDAAKQTEDN MLFYTIFRFF EQRNQRLRGS PNFTPGEHCE EHVAFFKQIF ENSBTAP00000020214/1-658 LDAAKQTEDH MLFYTIFRFF EQRNQRLRGN PSFTPGEHCE EHVAFFKQVF 701 750 bmy_05186T0/1-690 GDQALMRPTT F BACU019507/1-627 GDQALMRPTT F ENSTTRP00000008393/1-657 GDQALMRPTT F ENSP00000269221/1-657 GDQALMRPTT F ENSBTAP00000020214/1-658 GDQALMRPTT F