KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:41 2014 Check: 00 .. Name: ENSTTRP00000013032/1-184 Len: 239 Check: 3185 Weight: 1.00 Name: BACU012323/1-224 Len: 239 Check: 9794 Weight: 1.00 Name: ENSP00000337889/1-209 Len: 239 Check: 2487 Weight: 1.00 Name: bmy_05463T0/1-208 Len: 239 Check: 782 Weight: 1.00 Name: ENSBTAP00000020233/1-209 Len: 239 Check: 2799 Weight: 1.00 // 1 50 ENSTTRP00000013032/1-184 ---------- ---------- ---EHCY--- ------ASVF PFDADF---- BACU012323/1-224 ---------- -MMGWLATRA QPQAPPFYWG FWRAVGARLL PGAGRVAQGG ENSP00000337889/1-209 MELNSLLILL EAAEYLERRD REAEHGY--- ------ASVL PFDGDF---- bmy_05463T0/1-208 MELNSLLILL EAAEYLERRD REAEHGY--- ------ASVL PFDGDF---- ENSBTAP00000020233/1-209 MELNSLLILL EAAEYLERRD REAEHGY--- ------ASVL PFDGDF---- 51 100 ENSTTRP00000013032/1-184 ---------- ---PKLKPKS V-LVP----K VPNNRSSHNE LEKHRRAKLR BACU012323/1-224 TLSRSVRASG WPPPKLSGCS AALSPCRAVP PPPDRSVSGS F---RRAKLR ENSP00000337889/1-209 ---------- ---AREKTKA AGLVR----K APNNRSSHNE LEKHRRAKLR bmy_05463T0/1-208 ---------- ---ARKKTKA AGLVR----K APNNRSSHNE LEKHRRAKLR ENSBTAP00000020233/1-209 ---------- ---ARKKTKA AGLVR----K APNNRSSHNE LEKHRRAKLR 101 150 ENSTTRP00000013032/1-184 LYLEQLKQLV PLGPDSTRHT TLSLLKRAKM HIKXXXXXXX XXXXXXXXXX BACU012323/1-224 LYLEQLKQLV PLGPDSTRHT TLSLLKRAKM HIKKLEEQDR RALSIKEQLQ ENSP00000337889/1-209 LYLEQLKQLV PLGPDSTRHT TLSLLKRAKV HIKKLEEQDR RALSIKEQLQ bmy_05463T0/1-208 LYLEQLKQLV PLGPDSTRHT TLSLLKRAKM HIKKLEEQDR RALSIKEQLQ ENSBTAP00000020233/1-209 LYLEQLKQLV PLGPDSTRHT TLSLLKRAKM HIKKLEEQDR RALSIKEQLQ 151 200 ENSTTRP00000013032/1-184 XXXXXXXXXX XXXXXQSLER VRTDSTGSAV STDDSEQEVD VEGVGFGTGE BACU012323/1-224 REHRFLKRRL EQLSVQSLER VRTDSTGSAV STDDSEQEVD VEGMEFGTGE ENSP00000337889/1-209 QEHRFLKRRL EQLSVQSVER VRTDSTGSAV STDDSEQEVD IEGMEFGPGE bmy_05463T0/1-208 REHRFLKRRL EQLSVQSLER VRTDSTGSAV STDDSEQEVD VEGMEFGTGE ENSBTAP00000020233/1-209 REHRFLKRRL EQLSAQSLER VRTDSTGSAV STDDSEQEVD VEGMEFGPGE 201 250 ENSTTRP00000013032/1-184 LDSVGSGSDV DDHYSLR-GG CSHGSYGPPC RRPGRPGLS BACU012323/1-224 LDSVGSGSDV DDHYSLR-GG CSHGSYGPPC RRPGRPGLS ENSP00000337889/1-209 LDSVGSSSDA DDHYSLQSGT GGDSGFGPHC RRLGRPALS bmy_05463T0/1-208 LDSVGSGSDV DDHYSLR-GG CSHGSYGPPC RRPGHPGLS ENSBTAP00000020233/1-209 LDSVGSGSDV DDHYSLRGGG CSHGSFGPPC RRPGRPGLS