KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:41 2014 Check: 00 .. Name: ENSP00000285381/1-260 Len: 609 Check: 5700 Weight: 1.00 Name: ENSBTAP00000020243/1-260 Len: 609 Check: 4056 Weight: 1.00 Name: BACU008394/1-587 Len: 609 Check: 9111 Weight: 1.00 Name: bmy_18266T0/1-280 Len: 609 Check: 9730 Weight: 1.00 Name: ENSTTRP00000005468/1-248 Len: 609 Check: 1484 Weight: 1.00 // 1 50 ENSP00000285381/1-260 MAKEWGYASH NGPDHWHELF PNAKGENQSP VELHTKDIRH DPSLQPWSVS ENSBTAP00000020243/1-260 MAKEWGYADH NGPDHWHELF PNAKGENQSP IELNTKEISH DPSLKPWTAS BACU008394/1-587 MAKEWGYADH NGPDHWHELY PIAKGDNQSP IELHTKDIKH DPSLKPWSAS bmy_18266T0/1-280 MAKEWGYADH NGPDHWHELY PIAKGDNQSP IELHTKDIKH DPSLKPWSAS ENSTTRP00000005468/1-248 ---------- --PDHWHELY PIAKGDNQSP IELHTKDIKH DSSLKPWSAS 51 100 ENSP00000285381/1-260 YDGGSAKTIL NNGKTCRVVF DDTYDRSMLR GGPLPGPYRL RQFHLHWGSS ENSBTAP00000020243/1-260 YDPGSAKTIL NNGKTCRVVF DDTYDRSMLR GGPLAAPYRL RQFHLHWGSS BACU008394/1-587 YDPGSAKTIL NNGKTCRVVF DDTYDRSMLR GGPLTAPYRL RQFHLHWGSS bmy_18266T0/1-280 YDPGSAKTIL NNGKTCRVVF DDTYDRSMLR GGPLTAPYRL RQFHLHWGSS ENSTTRP00000005468/1-248 YDPGSAKTIL NNGKTCRVVF DDTYDRSMLR GGPLTAPYRL RQFHLHWGSS 101 150 ENSP00000285381/1-260 DDHGSEHTVD GVKYAAELHL VHWNPKYNTF KEALKQRDGI AVIGIFLKIG ENSBTAP00000020243/1-260 DDHGSEHSVD GVKYAAELHL VHWNSKYNSY ATALKHADGI AVVGVFLKIG BACU008394/1-587 DDHGSEHSVD GVKYAAELHL VHWNSKYNSF ASALKQPDGV AVIGIFLKIG bmy_18266T0/1-280 DDHGSEHSVD GVKYAAELHL VHWNSKYNSF GSALKQPDGV AVIGIFLKIG ENSTTRP00000005468/1-248 DDHGSEHSVD GVKYAAELHL VHWNSKYNSF GSALKQPDGV AVVGIFLKIG 151 200 ENSP00000285381/1-260 HENGEFQIFL DALDKIKTK- ---------- ---------G KEAPFTKFDP ENSBTAP00000020243/1-260 REKGEFQLLL DALDKIKTK- ---------- ---------G KEAPFNNFNP BACU008394/1-587 HEKGEFQLLL DALDKIKTK- ---------- ---------G KEAPFTNFDP bmy_18266T0/1-280 HEKGEFQLLL DALDKIKTKT LGQAMRVRPL TALGPAVSQG KEAPFTNFDP ENSTTRP00000005468/1-248 HEKHEFQLLL DALDKIKTK- ---------- ---------G KEAPFPNFDP 201 250 ENSP00000285381/1-260 SCLFPACRDY WTYQGSFTTP PCEECIVWLL LKEPMTVSSD QMAKLRSLLS ENSBTAP00000020243/1-260 SCLFPACRDY WTYHGSFTTP PCEECIVWLL LKEPITVSSD QIAKLRTLYS BACU008394/1-587 SCLFPACRDY WTYHGSFTTP PCEECIVW-- XXXXXXXXPE QMAKLRGLYS bmy_18266T0/1-280 SCLFPACRDY WTYHGSFTTP PCEECIVWLL LKEPVTVSHE QMAKLRGLYS ENSTTRP00000005468/1-248 SCLFPACRDY WTYHGSFTTP PCEECIVWLL LKEPITVSHE QMAKLRSLYS 251 300 ENSP00000285381/1-260 SAENEPPVPL VSNWRPPQPI NNRVVRASFK ---------- ---------- ENSBTAP00000020243/1-260 SAENEPPVPL VRNWRPPQPI KGRIVKASFK ---------- ---------- BACU008394/1-587 SAENEPPVHL VRNWRPPQPV KGRIVKASFK HYALEEEKEK EEEEEEEEEE bmy_18266T0/1-280 SMENEPPVHL VRNWRPPQPI KGRIVKASFK ---------- ---------- ENSTTRP00000005468/1-248 SAENEPPVPL VRNWRPPQPV KGRVVKASFK ---------- ---------- 301 350 ENSP00000285381/1-260 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020243/1-260 ---------- ---------- ---------- ---------- ---------- BACU008394/1-587 EEEKKKEEEE EEKEKKKKEK KEKEEKEEKR EKREKKKQQK KKEEEEEGEE bmy_18266T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005468/1-248 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000285381/1-260 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020243/1-260 ---------- ---------- ---------- ---------- ---------- BACU008394/1-587 EEEGEEEEEE GPEQWHKDFP IAKGERQSPV DIHTQAAVHD PTLKPLSLRY bmy_18266T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005468/1-248 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000285381/1-260 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020243/1-260 ---------- ---------- ---------- ---------- ---------- BACU008394/1-587 EQATSRRIIN NGHSFNVEFD DSQDKAVLEG GPLNGTYRLI QFHFHWGSSD bmy_18266T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005468/1-248 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000285381/1-260 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020243/1-260 ---------- ---------- ---------- ---------- ---------- BACU008394/1-587 EQGSEHTVDK KKYAAELHLV HWNTKYGEFG KAAQQPDGLA VLGIFLKIGD bmy_18266T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005468/1-248 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000285381/1-260 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020243/1-260 ---------- ---------- ---------- ---------- ---------- BACU008394/1-587 AKPGLQKVID VLDSIKAKGK SADFTNFDPR GLLPESLDYW TYPGSLTTPP bmy_18266T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005468/1-248 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000285381/1-260 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020243/1-260 ---------- ---------- ---------- ---------- ---------- BACU008394/1-587 LLESVTWLVL KEPISVSSEQ ISKFCTLNFN AEGEPEHLMV NNWRPTQPLK bmy_18266T0/1-280 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005468/1-248 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000285381/1-260 --------- ENSBTAP00000020243/1-260 --------- BACU008394/1-587 NRQIKASFK bmy_18266T0/1-280 --------- ENSTTRP00000005468/1-248 ---------