KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:10:42 2014 Check: 00 .. Name: bmy_10781T0/1-694 Len: 871 Check: 4243 Weight: 1.00 Name: ENSTTRP00000014300/1-854 Len: 871 Check: 7474 Weight: 1.00 Name: ENSP00000362306/1-861 Len: 871 Check: 1106 Weight: 1.00 Name: ENSBTAP00000020250/1-850 Len: 871 Check: 9784 Weight: 1.00 // 1 50 bmy_10781T0/1-694 ------GPPT SLFQPPRRPG LGTVGKPIRL LANHFQVQIP KIDVYHYDVD ENSTTRP00000014300/1-854 -------PPT SLFQPPRRPG LGTVGKPIRL LANHFQVQIP KIDVYHYDVD ENSP00000362306/1-861 MEALGPGPPA SLFQPPRRPG LGTVGKPIRL LANHFQVQIP KIDVYHYDVD ENSBTAP00000020250/1-850 -LSISSGPPA SLFQPPRRPG LGTVGKPIRL LANHFQVQIP KIDVYHYDVD 51 100 bmy_10781T0/1-694 IKPEKRPRRV NRDVVDTMVR HFKMQVFGDR QPGYDGKRNM YTAHPLPIGR ENSTTRP00000014300/1-854 IKPEKRPRRV NRDVVDTMVR HFKMQVFGDR QPGYDGKRNM YTAHPLPIGR ENSP00000362306/1-861 IKPEKRPRRV NREVVDTMVR HFKMQIFGDR QPGYDGKRNM YTAHPLPIGR ENSBTAP00000020250/1-850 IKPEKRPRRV NREVVDTMVR HFKMQIFGDR QPGYDGKRNM YTAHPLPIGR 101 150 bmy_10781T0/1-694 ERVDMEVTLP GEGKDQTFKV SVQWVSVVSL QLLLEALAGH LNEVPDDSVQ ENSTTRP00000014300/1-854 ERVDMEVTLP GEGKDQTFKV SVQWVSVVSL QLLLEALAGH LNEVPDDSVQ ENSP00000362306/1-861 DRVDMEVTLP GEGKDQTFKV SVQWVSVVSL QLLLEALAGH LNEVPDDSVQ ENSBTAP00000020250/1-850 DRVDMEVTLP GEGKDQTFKV SVQWVSVVSL QLLLEALAGH LNEVPDDSVQ 151 200 bmy_10781T0/1-694 ALDVITRHLP SMRYTPVGRS FFSPPEGYYH PLGGGREVWF GFHQSVRPAM ENSTTRP00000014300/1-854 ALDVITRHLP SMRYTPVGRS FFSPPEGYYH PLGGGREVWF GFHQSVRPAM ENSP00000362306/1-861 ALDVITRHLP SMRYTPVGRS FFSPPEGYYH PLGGGREVWF GFHQSVRPAM ENSBTAP00000020250/1-850 ALDVITRHLP SMRYTPVGRS FFSPPEGYYH PLGGGREVWF GFHQSVRPAM 201 250 bmy_10781T0/1-694 WNMMLNID-- ---------- ---------- ---------- ---------- ENSTTRP00000014300/1-854 WNMMLNIDVS ATAFYRAQPI IEFMCEVLDI QNINEQTKPL TDSQRVKFTK ENSP00000362306/1-861 WNMMLNIDVS ATAFYRAQPI IEFMCEVLDI QNINEQTKPL TDSQRVKFTK ENSBTAP00000020250/1-850 WNMMLNIDVS ATAFYRAQPI IEFMCEVLDI QNINEQTKPL TDSQRVKFTK 251 300 bmy_10781T0/1-694 ---GLKVEVT HCGQMKRKYR VCNVTRRPAS HQTFPLQLEN GQAMECTVAQ ENSTTRP00000014300/1-854 EIRXXXXXXX XXXXXXXXXX XXXXXXXXXX XXTFPLQLEN GQAMECTVAQ ENSP00000362306/1-861 EIRGLKVEVT HCGQMKRKYR VCNVTRRPAS HQTFPLQLEN GQAMECTVAQ ENSBTAP00000020250/1-850 EIRGLKVEVT HCGQMKRKYR VCNVTRRPAS HQTFPLQLEN GQAMECTVAQ 301 350 bmy_10781T0/1-694 YFKQKYSLQL KYPHLPCLQV GQEQKHTYLP LEVCNIVAGQ RCIKKLTDNQ ENSTTRP00000014300/1-854 YFKQKYSLQL KYPHLPCLQV GQEQKHTYLP LEVCNIVAGQ RCIKKLTDNQ ENSP00000362306/1-861 YFKQKYSLQL KYPHLPCLQV GQEQKHTYLP LEVCNIVAGQ RCIKKLTDNQ ENSBTAP00000020250/1-850 YFKQKYNLQL KYPHLPCLQV GQEQKHTYLP LEVCNIVAGQ RCIKKLTDNQ 351 400 bmy_10781T0/1-694 TSTMIKATAR SAPDRQEEIS RLVKSNSMVG GPDPYLKEFG IVVHNEMTEL ENSTTRP00000014300/1-854 TSTMIKATAR SAPDRQEEIS RLVKSNSMVG GPDPYLKEFG IVVHNEMTEL ENSP00000362306/1-861 TSTMIKATAR SAPDRQEEIS RLVKSNSMVG GPDPYLKEFG IVVHNEMTEL ENSBTAP00000020250/1-850 TSTMIKATAR SAPDRQEEIS RLVKSNSTVG GPDPYLKEFG VVVHNDMTEL 401 450 bmy_10781T0/1-694 TGRVLPAPML QYGGRNKTVA TPNQGVWDMR GKQFYAGIEI KVWAVACFAP ENSTTRP00000014300/1-854 TGRVLPAPML QYGGRNKTVA TPNQGVWDMR GKQFYAGIEI KVWAVACFAP ENSP00000362306/1-861 TGRVLPAPML QYGGRNKTVA TPNQGVWDMR GKQFYAGIEI KVWAVACFAP ENSBTAP00000020250/1-850 TGRVLPAPML QYGGRNKTVA TPNQGVWDMR GKQFYAGIEI KVWAVACFAP 451 500 bmy_10781T0/1-694 QKQCREDLLK ---------- ---------- ---------- ---------- ENSTTRP00000014300/1-854 QKQCREDLLK SFTDQLRKIS KDAGMPIQGQ PCFCKYAQGA DSVEPMFKHL ENSP00000362306/1-861 QKQCREDLLK SFTDQLRKIS KDAGMPIQGQ PCFCKYAQGA DSVEPMFKHL ENSBTAP00000020250/1-850 QKQCREDLLK SFTDQLRKIS KDAGMPIQGQ PCFCKYAQGA DSVEPMFKHL 501 550 bmy_10781T0/1-694 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014300/1-854 KMTYVGLQLI VVILPGKTPV YAEVKRVGDT LLGMATQCVQ VKNVVKTSPQ ENSP00000362306/1-861 KMTYVGLQLI VVILPGKTPV YAEVKRVGDT LLGMATQCVQ VKNVVKTSPQ ENSBTAP00000020250/1-850 KMTYVGLQLI VVILPGKTPV YAEVKRVGDT LLGMATQCVQ VKNVVKTSPQ 551 600 bmy_10781T0/1-694 ---------- ---------- -----PSVFQ QPVIFLGADV THPPAGDGKK ENSTTRP00000014300/1-854 TLSNLCLKIN AKLGGINNVL VPHQRPSVFQ QPVIFLGADV THPPAGDGKK ENSP00000362306/1-861 TLSNLCLKIN AKLGGINNVL VPHQRPSVFQ QPVIFLGADV THPPAGDGKK ENSBTAP00000020250/1-850 TLSNLCLKIN AKLGGINNVL VPHQRPSVFQ QPVIFLGADV THPPAGDGKK 601 650 bmy_10781T0/1-694 PSIAAVVGSM DGHPSRYCAT VRVQTSRQEI SQELLYSQEV IQDLTNMVRE ENSTTRP00000014300/1-854 PSIAAVVGSM DGHPSRYCAT VRVQTSRQEI SQELLYSQEV IQDLTNMVRE ENSP00000362306/1-861 PSIAAVVGSM DGHPSRYCAT VRVQTSRQEI SQELLYSQEV IQDLTNMVRE ENSBTAP00000020250/1-850 PSIAAVVGSM DGHPSRYCAT VRVQTSR--- -------QEV IQDLTNMVRE 651 700 bmy_10781T0/1-694 LLIQFYKSTR FKPTRIIYYR GGVSEGQMKQ VG-------- KSCNVLA--- ENSTTRP00000014300/1-854 LLIQFYKSTR FKPTRIIYYR GGVSEGQMKQ VAWPELIAIR KACISLEEDY ENSP00000362306/1-861 LLIQFYKSTR FKPTRIIYYR GGVSEGQMKQ VAWPELIAIR KACISLEEDY ENSBTAP00000020250/1-850 LLIQFYKSTR FKPTRIIYYR GGVSEGQMKQ VAWPELIAIR KACISLEEDY 701 750 bmy_10781T0/1-694 CTTLVSTIAH PSEFDFYLCS HAGIQVGKSG NVPAGTTVDS TITHPSEFDF ENSTTRP00000014300/1-854 RPGITYIVVQ KRHHTRLFCA DKTERVGKSG NVPAGTTVDS TITHPSEFDF ENSP00000362306/1-861 RPGITYIVVQ KRHHTRLFCA DKTERVGKSG NVPAGTTVDS TITHPSEFDF ENSBTAP00000020250/1-850 RPGITYIVVQ KRHHTRLFCA DKTERVGKSG NVPAGTTVDS TITHPSEFDF 751 800 bmy_10781T0/1-694 YLCSHAGIQG TSRPSHYQVL WDDNCFTADE LQLLTYQLCH TYVRCTRSVS ENSTTRP00000014300/1-854 YLCSHAGIQG TSRPSHYQVL WDDNCFTADE LQLLTYQLCH TYVRCTRSVS ENSP00000362306/1-861 YLCSHAGIQG TSRPSHYQVL WDDNCFTADE LQLLTYQLCH TYVRCTRSVS ENSBTAP00000020250/1-850 YLCSHAGIQG TSRPSHYQVL WDDNCFTADE LQLLTYQLCH TYVRCTRSVS 801 850 bmy_10781T0/1-694 IPAPAYYARL VAFRARYHLV DKDHDRQVSQ ANKIFLAEGS HVSGQSNGRD ENSTTRP00000014300/1-854 IPAPAYYARL VAFRARYHLV DKDHDS---- ------AEGS HVSGQSNGRD ENSP00000362306/1-861 IPAPAYYARL VAFRARYHLV DKDHDS---- ------AEGS HVSGQSNGRD ENSBTAP00000020250/1-850 IPAPAYYARL VAFRARYHLV DKDHDS---- ------AEGS HVSGQSNGRD 851 900 bmy_10781T0/1-694 PQALAKAVQI HHDTQHTMYF A ENSTTRP00000014300/1-854 PQALAKAVQI HHDTQHTMYF A ENSP00000362306/1-861 PQALAKAVQI HHDTQHTMYF A ENSBTAP00000020250/1-850 PQALAKAVQI HHDTQHTMYF A