KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:10:43 2014 Check: 00 .. Name: ENSP00000243189/1-290 Len: 338 Check: 5077 Weight: 1.00 Name: ENSBTAP00000020254/1-215 Len: 338 Check: 5549 Weight: 1.00 Name: bmy_02044T0/1-328 Len: 338 Check: 9294 Weight: 1.00 Name: ENSTTRP00000003323/1-280 Len: 338 Check: 2125 Weight: 1.00 // 1 50 ENSP00000243189/1-290 ---------- ---------- ---------- ----MSNYVN DMWPGSPQEK ENSBTAP00000020254/1-215 ---------- ---------- ---------- ----MSSYVN DLWSGSPP-K bmy_02044T0/1-328 MFHSAKKITL KALMELSFRA GVVEEKEARK LPSEMSSYVN DLWPGSLH-K ENSTTRP00000003323/1-280 ---------- ---------- ---------- ----MSSYVN DLWPGSPH-K 51 100 ENSP00000243189/1-290 DSPSTSRSGG SSRLSSRSRS RSFSRSSRSH SRVSSRFSSR S-------RR ENSBTAP00000020254/1-215 ASPSSSRSGS CSQPSSASGS R-----SPSR SSVSSRSWSR S--RSPPGRR bmy_02044T0/1-328 ASPSSSRSGP SSRLSSASGS HS-PRSSPSR SIVWSRSWSR SRSRSAPRRR ENSTTRP00000003323/1-280 ASPSSSRSGP SSRLSSASGS RS-PPSSPSR SIVSTRSWSR S-------RR 101 150 ENSP00000243189/1-290 SKSRSRSRRR HQRKYRRYSR SYSRSRSRSR SRRYRERRYG FTRRYYRSPS ENSBTAP00000020254/1-215 SRSRSRSRRR HQRRYRRYSR SYSRSHSRSR SRRYRERHSG STRRSYR--- bmy_02044T0/1-328 SRSRSRSRRR HRRRYRRYSR SYSRSRSRPR SRRYRERHHG SSRRSYRSL- ENSTTRP00000003323/1-280 SRSRSRSRRR HRRRYRRYSR SYSRSRSRPR SRRYRARHHG SSRRSYRSL- 151 200 ENSP00000243189/1-290 RYRSRSRSRS RSRGRSYCGR AYAIARGQRY YGFGRTVYPE EHSRWRDRSR ENSBTAP00000020254/1-215 -------SRS RSRGRLYYRS AYAIARGRHY YGFGRTVYPE ERRSWRGRSR bmy_02044T0/1-328 -------SRP RSRGRSPYRR AYAFARDRRY YGFGCTVYPE ERRGWRGRSR ENSTTRP00000003323/1-280 -------SRP RSRGRSPYRR AYAFARDRPY YGFGRTVYPE ERRGWRGRSR 201 250 ENSP00000243189/1-290 TRSRSRTPFR LSEKDRMELL EIAKTNAAKA LGTTNIDLPA SLRTVPSAKE ENSBTAP00000020254/1-215 SRSRSPTPFR LSEKDRMELL EIAKANAAKA LGTANFDLPA SLRSVPVSKE bmy_02044T0/1-328 TRSRSPTPFR LSEKDRMELL EIAKANATKA LGTANFDLPA SLRTVSVSKE ENSTTRP00000003323/1-280 TRSRSPTPFR LSEKDRMELL EIAKANAAKA LGTANFDLPA SLRTVSVSKE 251 300 ENSP00000243189/1-290 TSRGIGVSSN GAKPELSEKV TEDGTRNPNE KPTQQRSIAF SSNNSVAKP- ENSBTAP00000020254/1-215 RNQETAVLTN GAKSEMF--- ---------- ---------- ---------- bmy_02044T0/1-328 TNHGTAVLNN GAKSEPSDKL IEDETENPNK KSSQQKSIAF SSNNSVAKPL ENSTTRP00000003323/1-280 TNRGTAVLNN GAKSELSDKL IEDEIENPNE KSSQQKTIAF SSNXXXXXX- 301 350 ENSP00000243189/1-290 IQKSAKAATE EASSRSPKID QKKSPYGLWI PI------ ENSBTAP00000020254/1-215 ---------- ---------- ---------- -------- bmy_02044T0/1-328 LQKSAKATAE ETSSGSPKID KKKSPYGLWI PVEKNINS ENSTTRP00000003323/1-280 XQKSAKATAE ET-SGSPKID KKKSPYGLWI PVE-----