KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:44 2014 Check: 00 .. Name: ENSP00000276570/1-199 Len: 226 Check: 7554 Weight: 1.00 Name: bmy_21943T0/1-199 Len: 226 Check: 3853 Weight: 1.00 Name: ENSBTAP00000020262/1-199 Len: 226 Check: 8804 Weight: 1.00 Name: BACU011110/1-88 Len: 226 Check: 3762 Weight: 1.00 Name: ENSTTRP00000004085/1-159 Len: 226 Check: 1051 Weight: 1.00 // 1 50 ENSP00000276570/1-199 ---------M ACNIPNQRQR TLSTTGEALY EILGLHKGAS NEE---IKKT bmy_21943T0/1-199 MAMGRTGPVD GRDTKGRGQS VWKGWEENAD AALGSHGNDG KEQPFTLKER ENSBTAP00000020262/1-199 ---------M ACNIPNQRQR TMSTSGKALY EILGLHKGAS NEE---IKKT BACU011110/1-88 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004085/1-159 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000276570/1-199 YRKLALKHHP DKNPDDPAAT EKFKEINNAH AILTDISKRS IYDKYGSLGL bmy_21943T0/1-199 NRKLALKHHP DKNPDDPGAA EKFKEINNAH TILTDMSKRN IYDKYGSLGL ENSBTAP00000020262/1-199 YRKLALKHHP DKNPDDPGAA EKFKEINNAH TILTDMSKRN IYDKYGSLGL BACU011110/1-88 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004085/1-159 --KLALKHHP DKNPDDAGAA ERFKEINNAH AILTDTSKRN IYDKYGSLGL 101 150 ENSP00000276570/1-199 YVAEQFGDEN VNTYFMLSSW ---------- -----WAKAL FVIVGLLTGC bmy_21943T0/1-199 YVAEQFGDEN VNTYFMLSSW KLTKLIKIHR DKQKLFSSTL FVIIGLLTGC ENSBTAP00000020262/1-199 YVAEQFGDEN VNTYFMLSSW ---------- -----WAKTL FVIIGLLTGC BACU011110/1-88 ---------- ---------- ---------- --------TL FVIIGLLTGC ENSTTRP00000004085/1-159 YVAEQFGEEN VNTYFMLSSW ---------- -----WAKTL FVIIGLLTGC 151 200 ENSP00000276570/1-199 YFCCCLCCCC NCCCGHCRPE SSVPEEDFYV SPEDLEEQIK SDMEKDVDFP bmy_21943T0/1-199 YFCCCLCCCC NCCCGRCRPK SSMPEEDFYV SPEDLEEQIK TDIEKGT--- ENSBTAP00000020262/1-199 YFCCCLCCCC NCCCGRCWTK SSMPEEDFYV SPEDLEEQIK TDIAKDMDFP BACU011110/1-88 YFCCCLCCCC NCCCGRCRPK SSMPEEDFYV SPEDLEEQIK TDIEKDMDFP ENSTTRP00000004085/1-159 YFCCCLCCCC NCCCGRCRPK SSMPEEDFYV SPEDLEEQIK TDIEKDMDFP 201 250 ENSP00000276570/1-199 VFLQPTNANE KTQLIKEGSR SYCTDS bmy_21943T0/1-199 ---------- ----VR---- ------ ENSBTAP00000020262/1-199 VVLQPTNANE KTQLIREEPR SYCTDS BACU011110/1-88 VVLQPTNANE KTQLIREGPR SYCTDS ENSTTRP00000004085/1-159 VVLQPTNANE KTQLIREGPR SYCTDS