KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:10:57 2014 Check: 00 .. Name: ENSTTRP00000010930/1-564 Len: 625 Check: 5062 Weight: 1.00 Name: bmy_13307T0/1-399 Len: 625 Check: 2600 Weight: 1.00 Name: ENSP00000364490/1-563 Len: 625 Check: 1828 Weight: 1.00 Name: ENSBTAP00000020285/1-563 Len: 625 Check: 8181 Weight: 1.00 Name: BACU005711/1-624 Len: 625 Check: 3204 Weight: 1.00 // 1 50 ENSTTRP00000010930/1-564 MLLLSPPALR RALLTRPWRA AGLCWKHVSS LKVANEPVLA FTQGSPEREA bmy_13307T0/1-399 -MLLLPLALR RALLARPWRA AGLCFGVAAF L--------- ---------- ENSP00000364490/1-563 -MLLPAPALR RALLSRPWTG AGLRWKHTSS LKVANEPVLA FTQGSPERDA ENSBTAP00000020285/1-563 -MLLRSAALC RALLARRGRA AGLCRRCVSS LQVANEPVLA FTQGSPERDA BACU005711/1-624 -MLLPRLALR GALLARPWRA AGLCWKHVSS LKVANEPILA FTQGSPERDA 51 100 ENSTTRP00000010930/1-564 LQKALKELKG RTEAIPCVVG DEEVWTSDVR YQVSPFNHGH KVAKFCYADK bmy_13307T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSP00000364490/1-563 LQKALKDLKG RMEAIPCVVG DEEVWTSDVQ YQVSPFNHGH KVAKFCYADK ENSBTAP00000020285/1-563 LQKALKELKG RTEAIPCVVG DEEVWTSDVR YQASPFNHGH KVAKFCYADK BACU005711/1-624 LQKALKELKG RTEAIPCVVG DEEVWTSDVQ YQVSPFNHGH KVAKFCYADK 101 150 ENSTTRP00000010930/1-564 ALLHRAIEAA LAARKEWDLK PVADRAQVFL KAADMLSGPR RAEVLAKTMV bmy_13307T0/1-399 ---------- ---------- ---------- ---------- -AQILVPAEG ENSP00000364490/1-563 SLLNKAIEAA LAARKEWDLK PIADRAQIFL KAADMLSGPR RAEILAKTMV ENSBTAP00000020285/1-563 ALLHRAIGAA LAARKEWDLK PVADRAQVFL KAADLLSGPR RAEVLAKTMV BACU005711/1-624 ALLHRAIEAA LAARKEWDLK PVADRAQVFL KAADMLSGPR RAEILAKTMV 151 200 ENSTTRP00000010930/1-564 GQGKTVIQAE IDAAAELIDF FRFNAKFAVE LEGEQPISVP PSTNSVVYRG bmy_13307T0/1-399 GEGQLGSQAQ AVKSS----- ---------- -----VITVP PEQ------- ENSP00000364490/1-563 GQGKTVIQAE IDAAAELIDF FRFNAKYAVE LEGQQPISVP PSTNSTVYRG ENSBTAP00000020285/1-563 GQGKTVIQAE IDAAAELIDF FRFNAKFAME LEGEQPLSVP PSTNSMLYRG BACU005711/1-624 GQGKTVIQAE IDAAAELIDF FRFNAKFAVE LDGEQPISVP PSTNSVVYRG 201 250 ENSTTRP00000010930/1-564 LEGFVAAISP FNFTAIGGNL AGAPALMGNV VLWKPSDAAM LASYAVYRIL bmy_13307T0/1-399 ---------- ---------- -------GNV VLWKPSDTAM LASYAVYRIL ENSP00000364490/1-563 LEGFVAAISP FNFTAIGGNL AGAPALMGNV VLWKPSDTAM LASYAVYRIL ENSBTAP00000020285/1-563 LEGFVAAISP FNFTAIGGNL AGAPALMGNV VLWKPSDTAM LASYAVYRIL BACU005711/1-624 LEGFVAAISP FNFTAIGGNL AGAPALMGNV VLWKPSDTAM LASYAVYRIL 251 300 ENSTTRP00000010930/1-564 REAGLPPNII QFVPADGPT- ---------- ---------- ---------- bmy_13307T0/1-399 REAGLPPNII QFVPADGPT- ---------- ---------- ---------- ENSP00000364490/1-563 REAGLPPNII QFVPADGPL- ---------- ---------- ---------- ENSBTAP00000020285/1-563 REAGLPPNII QFVPADGPT- ---------- ---------- ---------- BACU005711/1-624 REAGLPPNII QFVPADGPTF GDTVTSSEHL CGINFTGSGN VVLWKPSDTA 301 350 ENSTTRP00000010930/1-564 ---------- ---------- ---------- FGDTVTSSEH LCGINFTGSV bmy_13307T0/1-399 ---------- ---------- ---------- FGDTVTSSEH LCGINFTGSV ENSP00000364490/1-563 ---------- ---------- ---------- FGDTVTSSEH LCGINFTGSV ENSBTAP00000020285/1-563 ---------- ---------- ---------- FGDTVTSSEH LCGINFTGSV BACU005711/1-624 MLASYAVYRI LREAGLPPNI IQFVPADRPT FGDTVTSSEH LCGINFTGSV 351 400 ENSTTRP00000010930/1-564 PXXXXXXXXX XXXXXXXXXX XXXXXXCGGK NFHFVHRSAD VDSVVSGTLR bmy_13307T0/1-399 PTFKHLWKQV AQNLDRFHTF PRLAGECGGK NFHFVHRSAD VDSVVSGTLR ENSP00000364490/1-563 PTFKHLWKQV AQNLDRFHTF PRLAGECGGK NFHFVHRSAD VESVVSGTLR ENSBTAP00000020285/1-563 PTFKHLWKQV AQNLDRFRTF PRLAGECGGK NFHFVHRSAD VDSVVSGTLR BACU005711/1-624 PTFKHLWRQV AQNLDRFHTF PRLAGECGGK NFHFVHRSAD VDSVVSGTLR 401 450 ENSTTRP00000010930/1-564 SAFEYGGQKC SACSRLYVPR SLWSQIKGRL LEERSRIKVG NPAEDFGSFF bmy_13307T0/1-399 SAFEYGGQKC SACSRLYVPH SLWPQIKGRL LEERSRIKVG NPAEDFGSFF ENSP00000364490/1-563 SAFEYGGQKC SACSRLYVPH SLWPQIKGRL LEEHSRIKVG DPAEDFGTFF ENSBTAP00000020285/1-563 SAFEYGGQKC SACSRLYAPR SLWPQIKGRL LEELGGIKVG NPAEDFGTFF BACU005711/1-624 SAFEYGGQKC SACSRLYVPR SLWPQIKGRL LEERSRIKVG NPAEDFGSFF 451 500 ENSTTRP00000010930/1-564 SAVIDAKSFS RIRKWLEHAH SSPSLTVLAG GQCDDSVGYF VEPCIIESKD bmy_13307T0/1-399 SAVIDAKSFS RIRKWLEHAH SSPSLTVLAG GQCDDSVGYF VEPCIIESKD ENSP00000364490/1-563 SAVIDAKSFA RIKKWLEHAR SSPSLTILAG GKCDDSVGYF VEPCIVESKD ENSBTAP00000020285/1-563 SAVIDAKSFG RIRKWLEHAR SSPSLTILAG GHCDDSVGYF VEPCIVETKD BACU005711/1-624 SAVIDAKSFS RIRKWLEHAH SSPSLTVLAG GQCDDSVGYF VEPCIIESKD 501 550 ENSTTRP00000010930/1-564 PQDPIMKEXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_13307T0/1-399 PRDPIMKEEI FGPVLTVYVY PDDKYKETLR LVDSTTSYGL TGAVFAQDKD ENSP00000364490/1-563 PQEPIMKEEI FGPVLSVYVY PDDKYKETLQ LVDSTTSYGL TGAVFSQDKD ENSBTAP00000020285/1-563 PQDPIMKEEI FGPVLAVYVY PDEEYKETLR LVDSTTSYGL TGAVFAQDKD BACU005711/1-624 PQDPIMKEEI FGPVLTVYVY PDDKYKETLR LVDSTTSYGL TGAVFAQDKD 551 600 ENSTTRP00000010930/1-564 XXXXXXXXXX XAAGNFYIND KSTGSVVGQQ PFGGARTSGT NDKPGGPHYI bmy_13307T0/1-399 VVREATEMLR NAAGNFYIND KSTGSVVGQQ PFGGARTSGT NDKPGGPHYI ENSP00000364490/1-563 VVQEATKVLR NAAGNFYIND KSTGSIVGQQ PFGGARASGT NDKPGGPHYI ENSBTAP00000020285/1-563 VLREATELLR HAAGNFYIND KSTGSVVGQQ PFGGARASGT NDKPGGPHYV BACU005711/1-624 VVREATEMLR NAAGNFYIND KSTGSVVGQQ PFGGARTSGT NDKPGGPHYI 601 650 ENSTTRP00000010930/1-564 LRWTSPQVIK ETHKPLGDWR YPYMQ bmy_13307T0/1-399 LRWTSPQVIK ETHKPLGDWR YPYMQ ENSP00000364490/1-563 LRWTSPQVIK ETHKPLGDWS YAYMQ ENSBTAP00000020285/1-563 LRWTSPQVIK ETHGPLGDWR YPYMQ BACU005711/1-624 LRWTSPQVIK ETHKPLGDWR YPYMQ