KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:04 2014 Check: 00 .. Name: ENSP00000361298/1-725 Len: 728 Check: 1768 Weight: 1.00 Name: ENSBTAP00000020322/1-723 Len: 728 Check: 2474 Weight: 1.00 Name: ENSTTRP00000000705/1-723 Len: 728 Check: 112 Weight: 1.00 Name: bmy_19778T0/1-724 Len: 728 Check: 2581 Weight: 1.00 Name: BACU000335/1-724 Len: 728 Check: 345 Weight: 1.00 // 1 50 ENSP00000361298/1-725 MAMDSS-LQA RLFPGLAIKI QRSNGLIHSA NVRTVNLEKS CVSVEWAEGG ENSBTAP00000020322/1-723 --MDSS-LQA RLFPGLTIKI QRSNGIIHSA SISTVNLEKS CVSVEWKEGG ENSTTRP00000000705/1-723 LPMDSSLLQA RLFPGLAIKI QRSNGLIHSA NVRTVNLEKS CVSVEWTEGG bmy_19778T0/1-724 --MDSSLLQA RLFPGLAIKI QRSNGLIHSA NVRTVNLEKS CVSVEWTEGG BACU000335/1-724 --MDSSLLQA RLFPGLAIKI QRSNGLIHSA NIRTVNLEKS CVSVEWTEGG 51 100 ENSP00000361298/1-725 ATKGKEIDFD DVAAINPELL QLLPLHPKDN LPLQENVTIQ KQKRRSVNSK ENSBTAP00000020322/1-723 DTKGKEVDFD DVAAINPELL QLLPLHLKDN LPLQENVTVQ KQKRRSVSSR ENSTTRP00000000705/1-723 ATKGKEIDFD DVAAINPEIL QLLPLHPKDN LPLQENVTVQ KQKRRSVSSK bmy_19778T0/1-724 ATKGKEIDFD DVAAINPELL QLLPLHPKDN LPLQENVTVQ KQKRRAVSSK BACU000335/1-724 ATKGKEIDFD DVAAINPELL QLLPLHPKDN LPLQENVTVQ KQKRRAVSSK 101 150 ENSP00000361298/1-725 IPAPKESLRS RSTRMSTVSE LRITAQENDM EVELPAAANS RKQFSVPPAP ENSBTAP00000020322/1-723 IPAPKEGLRG RSTRMSAVSE VRITTQENDM EVELPASANS RKQFSVAAGP ENSTTRP00000000705/1-723 IPAPKEGLRG RSTRMSTVPE VRVTTQENDM EVELPASANS RKQFSVPTGP bmy_19778T0/1-724 IPAPKEGLRG RSTRMSTVPE VRITTQENDM EVELPASANS RKQFSVPTGP BACU000335/1-724 IPAPKEGLRG RSTRMSTVPE VRITTQENDM EVELPASANS RKQFSVPTGP 151 200 ENSP00000361298/1-725 TRPSCPAVAE IPLRMVSEEM EEQVH-SIRG SSSANPVNSV RRKSCLVKEV ENSBTAP00000020322/1-723 SRPSCPAVSE IPLTMVSKEV EEQVH-SVRD SSSANSVKSV RRKSCIVKEM ENSTTRP00000000705/1-723 PRPSCPAVAE IPLTMVSEEV EEQVHSSVQG SSSANPVNSV RRKSCIVKEM bmy_19778T0/1-724 PRPSCPAVAE IPLTMVSEEV EEQVH-SVQG SSSANPVNSV RRKSCIVKEM BACU000335/1-724 PRPSCPAVAE IPLTMVGEEV EEQVH-SVQG SSSANPVNSV RRKSCIVKEM 201 250 ENSP00000361298/1-725 EKMKNKREEK KAQNSEMRMK RAQEYDSSFP NWEFARMIKE FRATLECHPL ENSBTAP00000020322/1-723 EKMKNKREEK RAQNSEMRIK RAQEYDNSFP NWEFARMIKE FRATLECHPL ENSTTRP00000000705/1-723 EKMKNKREEK RAQNSEMRIK RAQEYDNSFP NWEFFRMIKE FRGTLECHPL bmy_19778T0/1-724 EKMKNKREEK RAQNSEMRIK RAQEYDNSFP NWEFSRMIKE FRATLECHPL BACU000335/1-724 EKMKNKREEK RAQNSEMRIK RAQEYDNSFP NWEFSRMIKE FRATLECHPL 251 300 ENSP00000361298/1-725 TMTDPIEEHR ICVCVRKRPL NKQELAKKEI DVISIPSKCL LLVHEPKLKV ENSBTAP00000020322/1-723 TAADPIEEHR ICVCVRKRPL NKQELAKKEI DVISVPSKCV LLVHEPKLKV ENSTTRP00000000705/1-723 TVTDPIEEHR ICVCVRKRPL NKQELAKKEI DVISVPSKSV LLVHEPKLKV bmy_19778T0/1-724 TVTDPIEEHR ICVCVRKRPL NKQELAKKEI DVISVPSKCV LLVHEPKLKV BACU000335/1-724 TVTDPIEEHR ICVCVRKRPL NKQELAKKEI DVISVPSKCV LLVHEPKLKV 301 350 ENSP00000361298/1-725 DLTKYLENQA FCFDFAFDET ASNEVVYRFT ARPLVQTIFE GGKATCFAYG ENSBTAP00000020322/1-723 DLTKYLENQA FCFDFAFDET TSNEVVYRFT ARPLVQTIFE GGKATCFAYG ENSTTRP00000000705/1-723 DLTKYLENQA FCFDFAFDET ASNEVVYRFT ARPLVQTIFE GGKATCFAYG bmy_19778T0/1-724 DLTKYLENQA FCFDFAFDET ASNEVVYRFT ARPLVQTIFE GGKATCFAYG BACU000335/1-724 DLTKYLENQA FCFDFAFDET ASNEVVYRFT ARPLVQTIFE GGKATCFAYG 351 400 ENSP00000361298/1-725 QTGSGKTHTM GGDLSGKAQN ASKGIYAMAS RDVFLLKNQP CYRKLGLEVY ENSBTAP00000020322/1-723 QTGSGKTHTM GGDLYGKAQN ASKGIYAMAS RDVFLLKNQP RYRKLDLEVY ENSTTRP00000000705/1-723 QTGSGKTHTM GGDLCGKAQN ASKGIYAMAS RDVFLLKNQP RYRNLGLEVY bmy_19778T0/1-724 QTGSGKTHTM GGDLCGKAQN ASKGIYAMAS RDVFLLKNQP RYRNLGLEVY BACU000335/1-724 QTGSGKTHTM GGDLCGKAQN ASKGIYAMAS RDVFLLKNQP RYRNLGLEVY 401 450 ENSP00000361298/1-725 VTFFEIYNGK LFDLLNKKAK LRVLEDGKQQ VQVVGLQEHL VNSADDVIKM ENSBTAP00000020322/1-723 VTFFEIYNGK LFDLLNKKAK LRVLEDGKQQ VQVVGLQERL VSCADDVIKM ENSTTRP00000000705/1-723 VTFFEIYNGK LFDLLNKKAK LRVLEDGKQQ VQVVGLQEHV VSCADDVIKM bmy_19778T0/1-724 VTFFEIYNGK LFDLLNKKAK LRVLEDGKQQ VQVVGLQEHV VSCADDVIKM BACU000335/1-724 VTFFEIYNGK LFDLLNKKAK LRVLEDGKQQ VQVVGLQEHV VSCADDVIKM 451 500 ENSP00000361298/1-725 IDMGSACRTS GQTFANSNSS RSHACFQIIL RAKGRMHGKF SLVDLAGNER ENSBTAP00000020322/1-723 IDIGSACRTS GQTFANSNSS RSHACFQILL RTKGRVHGKF SLVDLAGNER ENSTTRP00000000705/1-723 IDIGSACRTS GQTFANSSSS RSHACFQILL RAKGRVHGKF SLVDLAGNER bmy_19778T0/1-724 IDIGSACRTS GQTFANSSSS RSHACFQILL RAKGRVHGKF SLVDLAGNER BACU000335/1-724 IDIGSACRTS GQTFANSSSS RSHACFQILL RAKGRVHGKF SLVDLAGNER 501 550 ENSP00000361298/1-725 GADTSSADRQ TRMEGAEINK SLLALKECIR ALGQNKAHTP FRESKLTQVL ENSBTAP00000020322/1-723 GADTSSADRQ TRMEGAEINK SLLALKECIR ALGQNKAHTP FRESKLTQVL ENSTTRP00000000705/1-723 GADTSSADRQ TRMEGAEINK SLLALKECI- ALGQNKAHTP FRESKLTQV- bmy_19778T0/1-724 GADTSSADRQ TRMEGAEINK SLLALKECIR ALGQNKAHTP FRESKLTQVL BACU000335/1-724 GADTSSADRQ TRMEGAEINK SLLALKECIR ALGQNKAHTP FRESKLTQVL 551 600 ENSP00000361298/1-725 RDSFIGENSR TCMIATISPG ISSCEYTLNT LRYADRVKEL SPHSGPSGEQ ENSBTAP00000020322/1-723 RDSFIGENSR TCMIAMISPG ISSCEYTLNT LRYADRVKEL SPHSGPSGEQ ENSTTRP00000000705/1-723 KDSFIGD-SR TCXIAMISPG ISSCEYTLNT LRYADRVKEL SPHSGPSGEQ bmy_19778T0/1-724 RDSFIGENSR TCMIAMISPG ISSCEYTLNT LRYADRVKEL SPHSGPSGEQ BACU000335/1-724 RDSFIGENSR TCMIAMISPG ISSCEYTLNT LRYADRVKEL SPHSGPSGEQ 601 650 ENSP00000361298/1-725 LIQMETEEME ACSNGALIPG NLSKEEEELS SQMSSFNEAM TQIRELEEKA ENSBTAP00000020322/1-723 PMQMETEEME AGSNGALSAG NFSKEEDELS SQMSSFNEAM TQIRELEERA ENSTTRP00000000705/1-723 PTQMETEEME ASSDGALSTG NFSKEEEELS SQMSSFNEAM TQIRELEERA bmy_19778T0/1-724 PTQMETEEME ASSNGALSAG NFSKEEEELS SQMSSFNEAM TQIRELEERA BACU000335/1-724 PTQMETEEME ASSNGALSAG NFSKEEEELS SQMSSFNEAM TQIRELEERA 651 700 ENSP00000361298/1-725 MEELKEIIQQ -GPDWLELSE MTEQPDYDLE TFVNKAESAL AQQAKHFSAL ENSBTAP00000020322/1-723 MEELKEIIQQ -GPGWLELSE MAEQPDYDLE TFVNKAECAL AQQAKHFSAL ENSTTRP00000000705/1-723 MEELKEIIQQ EGPGWLELSE MAEQPDYDLE TFVNKAECAL AQQTKHFSAL bmy_19778T0/1-724 MEELKEIIQE -GPGWLELSE MAEQPDYDLE TFVNKAECAL AQQAKHFSAL BACU000335/1-724 MEELKEIIQE -GPGWLELCE MAEQPDYDLE TFVNKAECAL AQQAKHFSAL 701 750 ENSP00000361298/1-725 RDVIKALRLA MQLEEQASRQ ISSKKRPQ ENSBTAP00000020322/1-723 RDVIKALRLA MQLEEQASKQ ISSKKRPQ ENSTTRP00000000705/1-723 QDVLKALRLV MQLEEQASKQ ISSKKR-- bmy_19778T0/1-724 QDVLKALRLA MQLEEQASKQ ISSKKRPH BACU000335/1-724 QDVLKALRLA MHLEEQASKQ ISIKKRPH