KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:05 2014 Check: 00 .. Name: bmy_04093T0/1-459 Len: 865 Check: 9064 Weight: 1.00 Name: BACU016247/1-820 Len: 865 Check: 8240 Weight: 1.00 Name: ENSTTRP00000010980/1-822 Len: 865 Check: 1705 Weight: 1.00 Name: ENSP00000403453/1-829 Len: 865 Check: 9333 Weight: 1.00 Name: ENSBTAP00000020325/1-832 Len: 865 Check: 8087 Weight: 1.00 // 1 50 bmy_04093T0/1-459 -MKDRSSTPP LHVH------ ---------- ---VDENTPV H--------- BACU016247/1-820 -----MAKPE RLPGGFELAN GRAADRVSEK EEEAGRSRRQ SWTVSAAASP ENSTTRP00000010980/1-822 MSASSSG--P RFPS------ ---------- ---CEKNRVT S--------- ENSP00000403453/1-829 MSASSSGGSP RFPS------ ---------- ---CGKNGVT S--------- ENSBTAP00000020325/1-832 MSASSSGGSP RFPS------ ---------- ---CGKNGVT S--------- 51 100 bmy_04093T0/1-459 -----VHIKK LPK----ASA TNSQKSHKRG MKGDTVNVRR SVRVKTKVPW BACU016247/1-820 WQDPGLRLQR LHKEAFLGAA VSLLKSHKRG MKGDTVNVRR SVRVKTKVPW ENSTTRP00000010980/1-822 -----LKQKK VLRTPCGSPS VTVTKSHKRG MKGDTVNVRR SVRVKTKVPW ENSP00000403453/1-829 -----LTQKK VLRAPCGAPS VTVTKSHKRG MKGDTVNVRR SVRVKTKVPW ENSBTAP00000020325/1-832 -----LTQKK VLRTPCGAPS VTVTKSHKRG MKGDTVNVRR SVRVKTKVPW 101 150 bmy_04093T0/1-459 MPPGKSSARH VGCKWENPPH CLEVTPPSSE KLVSVMRLSD LSTEDDDSGH BACU016247/1-820 MPPGKSSARH VGCKWENPPH CLEVTPPSSE KLVSVMRLSD LSTEDDDSGH ENSTTRP00000010980/1-822 MPPGKSSTRH VGCKWENPPH CLEITPPSSE KLVSVMRLSD LSTEDDDSGH ENSP00000403453/1-829 MPPGKSSARP VGCKWENPPH CLEITPPSSE KLVSVMRLSD LSTEDDDSGH ENSBTAP00000020325/1-832 MPPGKSSARH VGCNWENPPH CLEITPPSSE KLVFCTRLSD LSTEDDDSGH 151 200 bmy_04093T0/1-459 CKMNRYDKKI DSLMNAVGCL KSEVKMQKGE RQMAKRFLEE RKEELEEVAQ BACU016247/1-820 CKMNRYDKKI DSLMNAVGCL KSEVKMQKGE RQMAKRFLEE RKEELEEVAQ ENSTTRP00000010980/1-822 CKMNRYDKKI DSLMNAVGCL KSEVKTQKGE RQMAKRFLEE RKEELEEVAQ ENSP00000403453/1-829 CKMNRYDKKI DSLMNAVGCL KSEVKMQKGE RQMAKRFLEE RKEELEEVAH ENSBTAP00000020325/1-832 CKMNRYDKKI DSLMNAVGCL KSEVKMQKGE RQMAKRFLEE RKEELEEVAQ 201 250 bmy_04093T0/1-459 ELAETEHENT VLRHNIERIK EEKDFTMLQK KHLQQEKECL MSKLMEAEMD BACU016247/1-820 ELAETEHENT VLRHNIERIK EEKDFTMLQK KHLQQEKECL MSKLMEAEMD ENSTTRP00000010980/1-822 ELAETEHENT VLRHSIERIK EEKDFTMLQM -HLQQENECL MSKLME-EMD ENSP00000403453/1-829 ELAETEHENT VLRHNIERMK EEKDFTILQK KHLQQEKECL MSKLVEAEMD ENSBTAP00000020325/1-832 ELAETEHENT VLRHNIERIK EEKDYTMLQK KHLQQEKECL MSKLVEAEMD 251 300 bmy_04093T0/1-459 GAAAAKQVMA LKDTIGKLKT EKQMTCTDIN TLTRQKELLL QKLSTFEETN BACU016247/1-820 GAAAAKQVMA LKDTIGKLKT EKQMTCTDIN TLTRQKELLL QKLSTFEETN ENSTTRP00000010980/1-822 G-AAANQVMA -KDTIGKLKT EKQMTCTDIN TLTRQKELLL QKLSTFEETN ENSP00000403453/1-829 GAAAAKQVMA LKDTIGKLKT EKQMTCTDIN TLTRQKELLL QKLSTFEETN ENSBTAP00000020325/1-832 GAAAAKQVMA LKDTIGKLKS EKQMTCSDIN TLTRQKELLL QKLSTFEETN 301 350 bmy_04093T0/1-459 RTLRELLREQ HCKEDSEKLM EQQGALLKRL AEADSEKARL LLLLQDKDKE BACU016247/1-820 RTLRELLREQ HCKEDSEKLM EQQGALLKRL AEADSEKARL LLLLQDKDKE ENSTTRP00000010980/1-822 RTLRELLREQ HCKEDSEKLM EQQGTLLKRL AEADSEKARL LLLLQDKDKE ENSP00000403453/1-829 RTLRDLLREQ HCKEDSERLM EQQGALLKRL AEADSEKARL LLLLQDKDKE ENSBTAP00000020325/1-832 RTLRDLLREQ HCKEDSERLM EQQGTLLKRL AEADSEKARL LLLLQDKDKE 351 400 bmy_04093T0/1-459 VEELLQEIQC EKAQAKTASE LSKSMETMRG HLQAQLRCKE AENSRLCMQI BACU016247/1-820 VEELLQEIQC EKAQAKTASE LSKSMETMRG HLQAQLRCKE AENSRLCMQI ENSTTRP00000010980/1-822 VEELLQEIQC EKAQAKTASE LSKSMETMRG HLQAQLRCKE AENSRLCMQI ENSP00000403453/1-829 VEELLQEIQC EKAQAKTASE LSKSMESMRG HLQAQLRSKE AENSRLCMQI ENSBTAP00000020325/1-832 VEDLLQEIQC EKAQAKTASE LSKSMETMRG HLQAQLRCKE AENSRLCMQI 401 450 bmy_04093T0/1-459 KNLERSGNQH KAEVEAIMEQ LKELKQKGER DKESLKRAIR AQKERAEKSE BACU016247/1-820 KNLERSGNQH KAEVEAIMEQ LKELKQKGER DKESLKRAIR AQKERAEKSE ENSTTRP00000010980/1-822 KNLERSGNQH KVEVEAIMEQ LKELKQKGER DKESLKRAIR AQKERAEKSE ENSP00000403453/1-829 KNLERSGNQH KAEVEAIMEQ LKELKQKGDR DKESLKKAIR AQKERAEKSE ENSBTAP00000020325/1-832 KNLERSGNQH KAEVEAIMEQ LKELKQKGER DKESLKKAIR AQKERAEKSE 451 500 bmy_04093T0/1-459 EYAEQLHVQL ADK------- ---VAGLPEK GGPTVKRRG- ---------- BACU016247/1-820 EYAEQLHVQL ADKDLYVAEA LSTLESWRSR YNQVVKDKGD LELEIIVLND ENSTTRP00000010980/1-822 EYAEQLHVQL ADKXXXXXXX XXXXXXXXXX XXXXXKDKGD LELE-IVLND ENSP00000403453/1-829 EYAEQLHVQL ADKDLYVAEA LSTLESWRSR YNQVVKEKGD LELEIIVLND ENSBTAP00000020325/1-832 EYAEQLHVQL ADKDLYVAEA LSTLESWRSR YNQVVKDKGD LELEIIVLND 501 550 bmy_04093T0/1-459 ---------- ---------- ---------- ---------- ---------- BACU016247/1-820 RVTDLVNQQQ TLEEKMREDR DSLVERLHRQ TAEYSAFKLE NERLKASFAP ENSTTRP00000010980/1-822 RVTDLVNQQQ TLEEKMREDR DSLVERLHRQ TAEYSAFKLE NERLKASFTP ENSP00000403453/1-829 RVTDLVNQQQ TLEEKMREDR DSLVERLHRQ TAEYSAFKLE NERLKASFAP ENSBTAP00000020325/1-832 RVTDLVNQQQ TLEEKMREDR DSLVERLHRQ TAEYSAFKLE NERLKASFAP 551 600 bmy_04093T0/1-459 ---------- ---------- -WVG------ ---------- ---------- BACU016247/1-820 MEEKLNQAHV EVQQLKASVK NYEGMIDNYK SQVMKTRLEA DEVAAQLERC ENSTTRP00000010980/1-822 MEEKLSQAHV EVQQLKASVK NYEGMIDNYK SQVMKTRLEA DEVAAQLERC ENSP00000403453/1-829 MEDKLNQAHL EVQQLKASVK NYEGMIDNYK SQVMKTRLEA DEVAAQLERC ENSBTAP00000020325/1-832 MEDKLNQAHI EVQQLKASVK NYEGMIDNYK SQVMKTRLEA DEVAAQLERC 601 650 bmy_04093T0/1-459 ---------- ---------- ---------- ---------- -----CR--- BACU016247/1-820 DKENKILKDE MNKEIETARR QFQSQLADLQ QLPDILKITE AKLAECQDQL ENSTTRP00000010980/1-822 DKENKILKDE MNKEIETARR QFQSQLADLQ QLPDILKITE AKLAECQDQL ENSP00000403453/1-829 DKENKILKDE MNKEIEAARR QFQSQLADLQ QLPDILKITE AKLAECQDQL ENSBTAP00000020325/1-832 DKENKILKDE MNKEIEAARR QFQSQLADLQ QLPDILKITE AKLAECQDQL 651 700 bmy_04093T0/1-459 ---------- ---------- ---------- ---------- ---------- BACU016247/1-820 QGYERKNIDL TAIISDLRSR IEHQGDKLEM AREKHQASQK ENKQLSLKVD ENSTTRP00000010980/1-822 QGYERKNIDL TAIISDLRSR IEHQGDKLEM AREKHQASQK ENKQLSLKVD ENSP00000403453/1-829 QGYERKNIDL TAIISDLRSR IEHQGDKLEM AREKHQASQK ENKQLSLKVD ENSBTAP00000020325/1-832 QGYERKNIDL TAIISDLRSR IEHQGDKLEM AREKHQASQK ENKQLSLKVD 701 750 bmy_04093T0/1-459 ---------- ---------- ---------- ---------- ---------- BACU016247/1-820 ELERQVYHV- ---------- ---------- ---LGDDSWS VG-------- ENSTTRP00000010980/1-822 ELERKLEATS AQNIEFLQVI AKREEAIHQS QLRLEEKTRE CGTL---ARQ ENSP00000403453/1-829 ELERKLEATS AQNIEFLQVI AKREEAIHQS QLRLEEKTRE CGTL---ARQ ENSBTAP00000020325/1-832 ELERKLEATS AQNIEFLQVI AKREEAIHQS QLRLEEKTRE CGTLLAPALR 751 800 bmy_04093T0/1-459 ---------- ---------- ---------- ---------- --RMAALSRA BACU016247/1-820 --------KG QVEQTKEHAA SKERAAQNKI LDLETQLSRT KTELSQLRRS ENSTTRP00000010980/1-822 LESAIEDARR QVEQTKEHAA SKERAAQNKI LDLEAQLSRT KTELSQLRRS ENSP00000403453/1-829 LESAIEDARR QVEQTKEHAL SKERAAQNKI LDLETQLSRT KTELSQLRRS ENSBTAP00000020325/1-832 LQRILHSETG QVEQTKEHAA SKERAAQNKI LDLETQLSRT KTELSQLRRS 801 850 bmy_04093T0/1-459 RRKAE----- ---------- ---------- ---------- ---------- BACU016247/1-820 RDDADRRYQS RLQDLKDRLE QSESTNRSMQ NYVQFLKSSY ANVFGDGPYT ENSTTRP00000010980/1-822 RDDADRRYQS RLQDLKDRLE QSESTNRSMQ NYVQFLKSSY ANVFGDGPYT ENSP00000403453/1-829 RDDADRRYQS RLQDLKDRLE QSESTNRSMQ NYVQFLKSSY ANVFGDGPYS ENSBTAP00000020325/1-832 RDDADRRYQS RLQDLKDRLE QSESTSRSMQ NYVQFLKSSY ANVFGDGPYA 851 900 bmy_04093T0/1-459 ---------- ----- BACU016247/1-820 SYLTSSPIRS RSPPA ENSTTRP00000010980/1-822 SYLTSSPIRS RSPPA ENSP00000403453/1-829 TFLTSSPIRS RSPPA ENSBTAP00000020325/1-832 SYLTSSPIRS RSPPT