KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:11:08 2014  Check: 00 ..

 Name: ENSP00000329295/1-252     Len:    252  Check:  272  Weight:  1.00
 Name: ENSTTRP00000007586/1-252  Len:    252  Check:  1957  Weight:  1.00
 Name: ENSBTAP00000020332/1-234  Len:    252  Check:  9528  Weight:  1.00
 Name: bmy_06738T0/1-252         Len:    252  Check:  1257  Weight:  1.00
 Name: BACU006414/1-252          Len:    252  Check:  1043  Weight:  1.00

//


                          1                                                   50
ENSP00000329295/1-252     MQLTRCCFVF LVQGSLYLVI CGQDDGPPGS EDPERDDHEG QPRPRVPRKR 
ENSTTRP00000007586/1-252  MQLTRCCFVF LVQGSLYLVI CGQDDGPPGS EDPERDDPES QPRPRMPRKR 
ENSBTAP00000020332/1-234  ---------- --------VI CGQDDGPPGS EDPEHDDSES QTRPRMPRKR 
bmy_06738T0/1-252         MQLTRCCFVF LVQGSLYLVI CGQDDGPPGS EDPEHDDPES QPRTRMPRKR 
BACU006414/1-252          MQLTRCCFVF LVQGSLYLVI CGQDDGPPGS EDPEHDDPES QPRPRMPRKR 


                          51                                                 100
ENSP00000329295/1-252     GHISPKSRPM ANSTLLGLLA PPGEAWGILG QPPNRPNHSP PPSAKVKKIF 
ENSTTRP00000007586/1-252  GHMSPKSRPM ASSTLLGLLV PPGEAWGVLG QPPSRPNHSP PPSARVKKIF 
ENSBTAP00000020332/1-234  GHMSPKSRHM ANSTLLGLLA PPGEAWGVLG QPPSRPNHSP PPSAKVKKIF 
bmy_06738T0/1-252         GHMSPKSRPM ASSTLLGLLA PPGEAWGVLG QPPSRPNHSP PPSAKVKKIF 
BACU006414/1-252          GHMSPKSRPM ANSTLLGLLA PPGEAWGVLG QPPSRPNHSP PPSAKVKKIF 


                          101                                                150
ENSP00000329295/1-252     GWGDFYSNIK TVALNLLVTG KIVDHGNGTF SVHFQHNATG QGNISISLVP 
ENSTTRP00000007586/1-252  GWGDFYSNIK TVALNLLVTG KIVDHGNGTF SVHFRHNATG QGNISISLVP 
ENSBTAP00000020332/1-234  GWGDFYSNIK TVALNLLVTG KIVDHGNGTF SVHFRHNATG QGNISISLVP 
bmy_06738T0/1-252         GWGDFYSNIK TVALNLLVTG KIVDHGNGTF SVHFRHNATG QGNISISLVP 
BACU006414/1-252          GWGDFYSNIK TVALNLLVTG KIVDHGNGTF SVHFRHNATG QGNISISLVP 


                          151                                                200
ENSP00000329295/1-252     PSKAVEFHQE QQIFIEAKAS KIFNCRMEWE KVERGRRTSL CTHDPAKICS 
ENSTTRP00000007586/1-252  PSKAVEFHQE QQIFIEAKAS KIFNCRMEWE KVERGRRISL CTHDPAKTCS 
ENSBTAP00000020332/1-234  PSKAVEFHQE QQIFIEAKAS KIFNCRMEWE KVERGRRISL CTHDPAKTCS 
bmy_06738T0/1-252         PSKAVEFHQE QQIFIEAKAS KVFNCRMEWE KVERGRRISL CTHDPAKTCS 
BACU006414/1-252          PSKAVEFHQE QQIFIEAKAS KIFNCRMEWE KVERGRRISL CTHDPAKTCS 


                          201                                                250
ENSP00000329295/1-252     RDHAQSSATW SCSQPFKVVC VYIAFYSTDY RLVQKVCPDY NYHSDTPYYP 
ENSTTRP00000007586/1-252  RDHAQSSATW SCSQPFKVVC VYIAFYSTDY RLVQKVCPDY NYHSDTPYYP 
ENSBTAP00000020332/1-234  RDHAQSSATW SCSQPFKVVC VYIAFYSTDY RLVQKVCPDY NYHSDTPYYP 
bmy_06738T0/1-252         RDHAQSSATW SCSQPFKVVC VYIAFYSTDY RLVQKVCPDY NYHSDTPYYP 
BACU006414/1-252          RDHAQSSATW SCSQPFKVVC VYIAFYSTDY RLVQKVCPDY NYHSDTPYYP 


                          251                                                300
ENSP00000329295/1-252     SG 
ENSTTRP00000007586/1-252  SG 
ENSBTAP00000020332/1-234  SG 
bmy_06738T0/1-252         SG 
BACU006414/1-252          SG