KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:11:08 2014 Check: 00 .. Name: ENSP00000308622/1-698 Len: 702 Check: 5574 Weight: 1.00 Name: ENSBTAP00000020333/1-698 Len: 702 Check: 258 Weight: 1.00 Name: bmy_08614T0/1-357 Len: 702 Check: 3080 Weight: 1.00 Name: ENSTTRP00000010992/1-698 Len: 702 Check: 8085 Weight: 1.00 // 1 50 ENSP00000308622/1-698 MPSEGRCWET LKALRSSDKG RLCYYRDWLL RREDVLEECM SLPKLSSYSG ENSBTAP00000020333/1-698 MPSEGRCWET LQALRSCDKG RLCYDRDWLL RGEDVLQECM SLPKLSSYSG bmy_08614T0/1-357 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010992/1-698 MPSEGRCWET LQALRRSEKG RICYHRDWLL RGEDVLEECM SLPKLSSYSG 51 100 ENSP00000308622/1-698 WVVEHVLPHM QENQPLSETS PSSTSASALD QPSFVPKSPD ASSAFSPASP ENSBTAP00000020333/1-698 WVVDHVLPHI QKNAPPSETS ASSVSTSALD QPSSVPRSPL RNPAYSPVSS bmy_08614T0/1-357 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010992/1-698 WVVDHVLPNM QENPPPSETS TSPRSTSALG QPSFVPKSPV RDPAFSPVSS 101 150 ENSP00000308622/1-698 ATPNGTKGKD ESQHTESMVL QSSRGIKVEG CVRMYELVHR MKGTEGLRLW ENSBTAP00000020333/1-698 ATSNGTKDKY ESPHTEPVVL QSPRGMKVEG CIRMYELVHR MKGAEGLRQW bmy_08614T0/1-357 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010992/1-698 ATPDGTKDKY ESQHTEPMVL QSSQGIKVEG CIRMYELLHR MKGAEGLRQW 151 200 ENSP00000308622/1-698 QEEQERKVQA LSEMASEQLK RFDEWKELKQ HKEFQDLREV MEKSSREALG ENSBTAP00000020333/1-698 QEEQEKKVRA LSEMASEQLK RFDERKELKH HKEFQDLREV MEKSSREALG bmy_08614T0/1-357 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010992/1-698 QEEQERQARA LSEMASEQLK RFDERKELKH HKEFQDLREV MEKSSREALG 201 250 ENSP00000308622/1-698 HQEKLKAEHR HRAKILNLKL REAEQQRVKQ AEQERLRKEE GQIRLRALYA ENSBTAP00000020333/1-698 QQEKLKAEHR HRAKILNLKL REAEQQRLKQ EEQERLRKEE GQARLRGLYA bmy_08614T0/1-357 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010992/1-698 QQEKLKAEHH HRAKILNLKL REAEQQRLKH VERERLRKEE GQIRLRNLYA 251 300 ENSP00000308622/1-698 LQEEMLQLSQ QLDASEQHKA LLKVDLAAFQ TRGNQLCSLI SGIIRASSES ENSBTAP00000020333/1-698 LQEEVLHLSQ QLDASDQHRD LLQVDLSAFR TRGNQLCSLV SGIIRATSEN bmy_08614T0/1-357 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010992/1-698 LQEEVLHLSQ QLDAADQRRD LPRVDLSAFR TRGNQLCGLI SGIIRATSEN 301 350 ENSP00000308622/1-698 SYPTAESQAE AERALREMRD LLMNLGQEIT RACEDKRRQD EEEAQVKLQE ENSBTAP00000020333/1-698 GFPTVEDQAA AEGALQEMRD LLSNLHQEIR RACEEKRRRD EEEARIKQQE bmy_08614T0/1-357 ---------- -------MRD LLVNLQQEIA RACEDRRRQD EEEARVKRQE ENSTTRP00000010992/1-698 GFPTAEEQAV AERALQEMRD LLVNLQQEIA RACEDRRRQD EEEAQVQRQE 351 400 ENSP00000308622/1-698 AQMQQGPEAH KEPPAPSQGP GGKQNEDLQV KVQDITMQWY QQLQDASMQC ENSBTAP00000020333/1-698 SQMQQRPEAH KELPVPNQGP GAKPNEDLQM KVQDSTMQWY QQLQEASSRC bmy_08614T0/1-357 SQVRQGPEVR KEPPASRQGP GGKLNEALQN TVCLLTALFW ---------- ENSTTRP00000010992/1-698 SQVQQGPEVR KEPPASRQGP GGKLNEDLQV KVQDSTMQWY QQLQEASSQC 401 450 ENSP00000308622/1-698 VLTFEGLTNS KDSQAKKIKM DLQKAATIPV SQISTIAGSK LKEIFDKIHS ENSBTAP00000020333/1-698 VLAFEGLSNS KDSQAKKIKM DLQKAATIPV SQISTIAGSK LKEIFDKIHS bmy_08614T0/1-357 ---------- ---QAKKIKM DLQKAATIPV SQISTIAGSK LKEIFDKIHS ENSTTRP00000010992/1-698 VLAFEGLSNS KDSQAKKIKM DLQKAATIPV SQISTIAGSK LKEIFDKIHS 451 500 ENSP00000308622/1-698 LLSGKPVQSG GRSVSVTLNP QGLDFVQYKL AEKFVKQGEE EVASHHEAAF ENSBTAP00000020333/1-698 LLSGKPVQSG GRSVSVTLNP QGLDFVQYKL AEKFVKQGEE EVASHHEAAF bmy_08614T0/1-357 LLSGKPVQSG GRSVSVTLNP QGLDFVQYKL AEKFVKQGEE EVASHHEAAF ENSTTRP00000010992/1-698 LLSGKPVQSG GRSVSVTLNP QGLDFVQYKL AEKFVKQGEE EVASHHEAAF 501 550 ENSP00000308622/1-698 PIAVVASGIW ELHPRVGDLI LAHLHKKCPY SVPFYPTFKE GMALEDYQRM ENSBTAP00000020333/1-698 PIAVVASGIW ELHPRVGALI LAHLHKKCPY SVPFYPAFKE GMALEDYQRM bmy_08614T0/1-357 PIAVVASGIW ELHPRVGDLI LAHLHKKCPY SVPFYPAFKE GMALEDYQRM ENSTTRP00000010992/1-698 PIAVVASGIW ELHPRVGDLI LAHLHKKCPY SVPFYPAFKE GMALEDYQRM 551 600 ENSP00000308622/1-698 LGYQVKDSKV EQQDNFLKRM SGMIRLYAAI IQLRWPYGNR QEIHPHGLNH ENSBTAP00000020333/1-698 LGYQVKDSKV EQQDNFLKRM SGMIRLYAAI IQLRWPYGNR QETHPHGLNH bmy_08614T0/1-357 LGYQVTDSRV EQQDNFLKRM SGMIRLYAAI IQLRWPYGNR QEIHPHGLNH ENSTTRP00000010992/1-698 LGYKVTDCRV EQQDSFLKRM SGMIRLYAAI IQLRWPYGNR QEIHPHGLNH 601 650 ENSP00000308622/1-698 GWRWLAQILN MEPLSDVTAT LLFDFLEVCG NALMKQYQVQ FWKMLILIKE ENSBTAP00000020333/1-698 GWRWLAQILN MEPLSDVTAT LLFDFLEVCG NALMKQYQVQ FWKMILLIKE bmy_08614T0/1-357 GWRWLAQILN MEPLSDVTAT LLFDFLEVCG NALMKQYQLQ FWKMILLIKE ENSTTRP00000010992/1-698 GWRWLAQILN MEPLSDVTAT LLFDFLEVCG NALMKQYQVQ FWKMILLIKE 651 700 ENSP00000308622/1-698 DYFPRIEAIT SSGQMGSFIR LKQFLEKC-- --LQHKDIPV PKGFLTSSFW ENSBTAP00000020333/1-698 DYFPRIEAIT SSGQMGSFIR LKQFLEKC-- --LQHREVPV PKGFLTASFW bmy_08614T0/1-357 DYFPRIEAIT SSGQMGSFIR LKQFLEGCHF IVFLRVIVHT ARGEKLS--- ENSTTRP00000010992/1-698 DYFPRIEAIT SSGQMGSFIR LKQFLEKC-- --LQRKEIPV PKGFLTSSFW 701 750 ENSP00000308622/1-698 RS ENSBTAP00000020333/1-698 RS bmy_08614T0/1-357 -- ENSTTRP00000010992/1-698 RS