KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:12 2014 Check: 00 .. Name: bmy_20135T0/1-279 Len: 551 Check: 2994 Weight: 1.00 Name: ENSBTAP00000020351/1-551 Len: 551 Check: 6854 Weight: 1.00 Name: ENSP00000222644/1-540 Len: 551 Check: 4759 Weight: 1.00 Name: BACU003757/1-540 Len: 551 Check: 5361 Weight: 1.00 Name: ENSTTRP00000015838/1-540 Len: 551 Check: 5019 Weight: 1.00 // 1 50 bmy_20135T0/1-279 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020351/1-551 LFFNTAFISA AMQQVLDNLT ELPSSTGAEE IDLIFLKGIM ENPIVKSLAK ENSP00000222644/1-540 ---------- -MQQVLENLT ELPSSTGAEE IDLIFLKGIM ENPIVKSLAK BACU003757/1-540 ---------- -MQQVLDNLT ELPSSTGAEE IDLIFLKGIM ENPIVKSLAK ENSTTRP00000015838/1-540 ---------- -MQQVLDNLT ELPSSTGAEE IDLIFLKGIM ENPIVKSLAK 51 100 bmy_20135T0/1-279 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020351/1-551 AHERLEDSKL EAVSDNNLEL VNEILEDITP LINVDENVAE LVGILKEPHF ENSP00000222644/1-540 AHERLEDSKL EAVSDNNLEL VNEILEDITP LINVDENVAE LVGILKEPHF BACU003757/1-540 AHERLEDSKL EAVSDNNLEL VNEILEDITP LINVDENVAE LVGILKEPHF ENSTTRP00000015838/1-540 AHERLEDSKL EAVSDNNLEL VNEILEDITP LINVDENVAE LVGILKEPHF 101 150 bmy_20135T0/1-279 ---------- ----MERHPS ---------- ---------- ---------- ENSBTAP00000020351/1-551 QSLLEAHDIV ASKCYESPPS SPEMNNSSIN NQLLPVDAIR ILGIHKRAGE ENSP00000222644/1-540 QSLLEAHDIV ASKCYDSPPS SPEMNNSSIN NQLLPVDAIR ILGIHKRAGE BACU003757/1-540 QSLLEAHDIV ASKCYESPPS SPEMNNSSIN NQLLPVDAIR ILGIHKRAGE ENSTTRP00000015838/1-540 QSLLEAHDIV ASKCYESPPS SPEMNNSSIN NQLLPVDAIR ILGIHKRAGE 151 200 bmy_20135T0/1-279 ---------- ---------- ---------- HV-------- ---------- ENSBTAP00000020351/1-551 PLGVTFRVEN NDLVIARILH GGMIDRQGLL HVGDIIKEVN GHEVGNNPKE ENSP00000222644/1-540 PLGVTFRVEN NDLVIARILH GGMIDRQGLL HVGDIIKEVN GHEVGNNPKE BACU003757/1-540 PLGVTFRVEN NDLVIARILH GGMIDRQGLL HVGDIIKEVN GHEVGNNPKE ENSTTRP00000015838/1-540 PLGVTFRVEN NDLVIARILH GGMIDRQGLL HVGDIIKEVN GHEVGNNPKE 201 250 bmy_20135T0/1-279 ---------- ---------- ------RQVF VKCHFDYNPY NDNLIPCKEA ENSBTAP00000020351/1-551 LQELLKNISG SVTLKILPSY RDTIIPQQVF VKCHFDYNPY NDNLIPCKEA ENSP00000222644/1-540 LQELLKNISG SVTLKILPSY RDTITPQQVF VKCHFDYNPY NDNLIPCKEA BACU003757/1-540 LQELLKNISG SVTLKILPSY RDTIIPQQVF VKCHFDYNPY NDNLIPCKEA ENSTTRP00000015838/1-540 LQELLKNISG SVTLKILPSY RDTIIPQQVF VKCHFDYNPY NDNLIPCKEA 251 300 bmy_20135T0/1-279 GLKFSKGEIL QIVNREDPNW WQASHVKEGG SAGLIPSQFL EEKRKAFVRR ENSBTAP00000020351/1-551 GLKFSKGEIL QIVNREDPNW WQASHVKEGG SAGLIPSQFL EEKRKAFVRR ENSP00000222644/1-540 GLKFSKGEIL QIVNREDPNW WQASHVKEGG SAGLIPSQFL EEKRKAFVRR BACU003757/1-540 GLKFSKGEIL QIVNREDPNW WQASHVKEGG SAGLIPSQFL EEKRKAFVRR ENSTTRP00000015838/1-540 GLKFSKGEIL QIVNREDPNW WQASHVKEGG SAGLIPSQFL EEKRKAFVRR 301 350 bmy_20135T0/1-279 DWDNSGPFCG TISSKKKKKM MYLTTRNA-- ---------- ---------- ENSBTAP00000020351/1-551 DWDNSGPFCG TISSKKKKKM MYLTTRNAEF DRHEIQIYEE VAKMPPFQRK ENSP00000222644/1-540 DWDNSGPFCG TISSKKKKKM MYLTTRNAEF DRHEIQIYEE VAKMPPFQRK BACU003757/1-540 DWDNSGPFCG TISSKKKKKM MYLTTRNAEF DRHEIQIYEE VAKMPPFQRK ENSTTRP00000015838/1-540 DWDNSGPFCG TISSKKKKKM MYLTTRNAEF DRHEIQIYEE VAKMPPFQRK 351 400 bmy_20135T0/1-279 ---------- ---------- ---------- --VTSRKPRE DEKDGQAYKF ENSBTAP00000020351/1-551 TLVLIGAQGV GRRSLKNRFI VLNPTRFGTT VPFTSRKPRE DEKDGQAYKF ENSP00000222644/1-540 TLVLIGAQGV GRRSLKNRFI VLNPTRFGTT VPFTSRKPRE DEKDGQAYKF BACU003757/1-540 TLVLIGAQGV GRRSLKNRFI VLNPTRFGTT VPFTSRKPRE DEKDGQAYKF ENSTTRP00000015838/1-540 TLVLIGAQGV GRRSLKNRFI VLNPTRFGTT VPFTSRKPRE DEKDGQAYKF 401 450 bmy_20135T0/1-279 VSRSEMEADI KAGKYLEHGE YEGNLYGTKI DSILEVVQTG RTCILDVNPQ ENSBTAP00000020351/1-551 VSRSEMEADI KAGKYLEHGE YEGNLYGTKI DSILEVVQTG RTCILDVNPQ ENSP00000222644/1-540 VSRSEMEADI KAGKYLEHGE YEGNLYGTKI DSILEVVQTG RTCILDVNPQ BACU003757/1-540 VSRSEMEADI KAGKYLEHGE YEGNLYGTKI DSILEVVQTG RTCILDVNPQ ENSTTRP00000015838/1-540 VSRSEMEADI KAGKYLEHGE YEGNLYGTKI DSILEVVQTG RTCILDVNPQ 451 500 bmy_20135T0/1-279 ALKVLRTSEF MPYVVFIAAP ELETLRAMHK AVVDAGITTK LLTDSDLKKT ENSBTAP00000020351/1-551 ALKVLRTSEF MPYVVFIAAP ELDTLRAMHK AVVEAGITTK LLTDSDLKKT ENSP00000222644/1-540 ALKVLRTSEF MPYVVFIAAP ELETLRAMHK AVVDAGITTK LLTDSDLKKT BACU003757/1-540 ALKVLRTSEF MPYVVFIAAP ELETLRAMHK AVVDAGITTK LLTDSDLKKT ENSTTRP00000015838/1-540 ALKVLRTSEF MPYVVFIAAP ELETLRAMHK AVVDAGITTK LLTDSDLKKT 501 550 bmy_20135T0/1-279 VDESARIQRA YNHYFDLIIV NDNLDKAFEK LQTAIEKLRM EPQWVPISWV ENSBTAP00000020351/1-551 VDESARIQRA YNHYFDLIII NDNLDKAFEK LQTAIEKLRM EPQWVPISWV ENSP00000222644/1-540 VDESARIQRA YNHYFDLIII NDNLDKAFEK LQTAIEKLRM EPQWVPISWV BACU003757/1-540 VDESARIQRA YNHYFDLIIV NDNLDKAFEK LQTATEKLRV ESQWVPISWV ENSTTRP00000015838/1-540 VDESARIQRA YNHYFDLIIV NDNLDKAFEK LQTAIEKLRM EPQWVPISWV 551 600 bmy_20135T0/1-279 Y ENSBTAP00000020351/1-551 Y ENSP00000222644/1-540 Y BACU003757/1-540 Y ENSTTRP00000015838/1-540 Y