KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:13 2014 Check: 00 .. Name: ENSP00000228918/1-435 Len: 454 Check: 63 Weight: 1.00 Name: ENSBTAP00000020355/1-428 Len: 454 Check: 9972 Weight: 1.00 Name: bmy_11506T0/1-423 Len: 454 Check: 8815 Weight: 1.00 Name: BACU003085/1-421 Len: 454 Check: 1395 Weight: 1.00 Name: ENSTTRP00000013715/1-429 Len: 454 Check: 7989 Weight: 1.00 // 1 50 ENSP00000228918/1-435 MLLPWATSAP GLAWGPLVLG LFGLLAASQP QAVP------ -PYASENQTC ENSBTAP00000020355/1-428 MRLLWATSHR GLAWGLLILG VWGLLAASQP QLEREEPVQG LPYHTENQSC bmy_11506T0/1-423 MRLPWAASPC GLAWGPLILG LWGLLAASQP QLVP------ -PYRTENQTC BACU003085/1-421 MRLPWAASPC GLAWGPLILG LWGLLAASQP QLMP------ -PYRTENQTC ENSTTRP00000013715/1-429 MRMPWAAS-C GLAW-PLI-G LWGLLAASQL QLVP------ -PYRTENQTC 51 100 ENSP00000228918/1-435 RDQEKEYYEP QHRICCSRCP PGTYVSAKCS RIRDTVCATC AENSYNEHWN ENSBTAP00000020355/1-428 GDQEKEYYES KLRLCCSRCP PGTHISTKCS RRQNTVCATC PEKSYNEHWN bmy_11506T0/1-423 RDQEKEYYEP KHHVCCSRCP PGTHVSAECG PDQDTTCATC PENSYNEHWN BACU003085/1-421 RDQEKEYYEP KHHVCCSRCP PGTHVSAECG PDQDTTCATC PENSYNEHWN ENSTTRP00000013715/1-429 RDRETEYYEP KHHVCCSRCP PGTHVSAECG PDQDTTCATC PENSYNEHWN 101 150 ENSP00000228918/1-435 YLTICQLCRP CDPVMGLEEI APCTSKRKTQ CRCQPGMFCA AWALECTHCE ENSBTAP00000020355/1-428 HLSFCQLCRP CDKMLGFVEL TPCTSNRKAQ CHCQPGMYCV FWNSECEHCE bmy_11506T0/1-423 HLSICQLCRP CDQMLGFVEI TPCTSKHKTQ CRCQPGLFCV FWGSECVHCE BACU003085/1-421 HLSICQLCRP CDQMLGFVEI TPCTSKHKTQ CRCQPGLFCV FWGSECVHCE ENSTTRP00000013715/1-429 HLSICQLCRP CDQMLGFMEI TPCTSKHKTQ CRCQPGLFCV FWGSECVHCE 151 200 ENSP00000228918/1-435 LLSDCPPGTE AELKDEVGKG NNHCVPCKAG HFQNTSSPSA RCQPHTRCEN ENSBTAP00000020355/1-428 PLSDCPPGTE AELKDEVIEA NSNCVPCKAG HFQNTSSPTA RCRPHTRCED bmy_11506T0/1-423 SLSHCPPGTE AELKDEDRKA NSNCVPCKAG HFQNTSSPSA RCQPHTRCED BACU003085/1-421 SLSHCPPGTE AELKDEDRKA NSNCVPCKAG HFQNTSSPSA RCQPPTRCED ENSTTRP00000013715/1-429 SLSHCPPGTE AELKDEDRKA NSNCVPCKAG HFQNTSSPSA RCQPHTRCED 201 250 ENSP00000228918/1-435 QGLVEAAPGT AQSDTTCKNP LEPLPPEMSG TMLMLAVLLP LAFFLLLATV ENSBTAP00000020355/1-428 QGLVEEAPGT PQSDTSCRNP --QEPPDMPG TMLVLAILLP LVSFLLLTTV bmy_11506T0/1-423 QGLVEAAPGT SRSDTSCRNP --PEPSETP- ---------E LESSSLAAHP BACU003085/1-421 QGLVEAAPGT SRSDTSCRNP --PEPSEMPG TMLVLAVLLP LVSFLLLTTV ENSTTRP00000013715/1-429 QGLVEAAPGT SRSDTSCRNP --PEPSETPG TMLVLAVLLP LVSLLLLTTV 251 300 ENSP00000228918/1-435 FSCIWKSHPS L---CRK--- LGSLLKRRPQ GEGPNPVAGS WEPPKAHPYF ENSBTAP00000020355/1-428 FVYTWKSHPS L---CRK--- LGSLLKRHPE GEESNPADGN WEPPRFNTHV bmy_11506T0/1-423 ASCSGPHAPS CLLSCRNDAG AGRLAAACLP SAPHHCPRLH LEEPPLSLQK BACU003085/1-421 LACTWKSHPS L---CRK--- LGSLLKRHPE GEESNTAEGS WEPPRVNPQY ENSTTRP00000013715/1-429 FACTWKSHPS L---CRK--- LGSLLKRHPE GEESNTAEGS WEPPRVNPQY 301 350 ENSP00000228918/1-435 PDLV------ QPLLPISGDV SPVSTGLPAA PVLEAGVPQQ QSPLDLTREP ENSBTAP00000020355/1-428 PDLV------ KPLLPAPGDL ALASGGVPAN PGLEEEVLQQ QSPLSQARDL bmy_11506T0/1-423 AGIPAQEASR EPLLPTSGDL TPASAGVPAT PGLEEEALQQ QSPLSQAREL BACU003085/1-421 PDLV------ EPLLPTSGDL TPASAGVPAT PGLEEEALQQ QSPLSQAREL ENSTTRP00000013715/1-429 PDLV------ EPLLPTSGDL TPASAGLPAS PGLEEEALQQ QSPLSQAREL 351 400 ENSP00000228918/1-435 QLEPGEQSQV AHGTNGIHVT GGSMTITGNI YIYNGPVLGG PPGPGDLPAT ENSBTAP00000020355/1-428 DAEPPEQGQV APGTNGIHVT GGSVTVTGNI YIYNGPVLGG ARGPGDPPAP bmy_11506T0/1-423 EAELPEQGQV AHGTNGIHVT GGSVTVTGNI YIYNGPVLGG ARGPGEPPAP BACU003085/1-421 EAELPEQGQV AHGTNGIHVT GGSVTVTGNI YIYNGPVLGG ARGPGDPPAP ENSTTRP00000013715/1-429 EAELPEQGQV AHGTNGIHVT GGSVTVTGNI YIYNGPVLGG ARGPGDTPAP 401 450 ENSP00000228918/1-435 PEPPYPIPEE GDPGPPGLST PHQEDGKAWH LAETEHCGAT PSNRGPRNQF ENSBTAP00000020355/1-428 PEPPYPIPEE GAPRPPGLSM PYQEDGKAWH LAETETLGCY AL-------- bmy_11506T0/1-423 PEPPYPIPEE GAPSPPGLST PYQEDGKAWH LAETETLGCH TL-------- BACU003085/1-421 PDPPYPIPEE GAPSPPGLST PYQEDGKAWH LAETETLGCH TL-------- ENSTTRP00000013715/1-429 PEPPYPIPEE GAPSPPGLST PYQEDGKAWH LAETEHWGAT PPN-GPRTQF 451 500 ENSP00000228918/1-435 ITHD ENSBTAP00000020355/1-428 ---- bmy_11506T0/1-423 ---- BACU003085/1-421 ---- ENSTTRP00000013715/1-429 VTHA