KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:14 2014 Check: 00 .. Name: ENSTTRP00000004565/1-662 Len: 905 Check: 6733 Weight: 1.00 Name: bmy_07952T0/1-591 Len: 905 Check: 32 Weight: 1.00 Name: ENSP00000283228/1-657 Len: 905 Check: 9898 Weight: 1.00 Name: ENSBTAP00000020359/1-655 Len: 905 Check: 6545 Weight: 1.00 Name: BACU016426/1-311 Len: 905 Check: 7356 Weight: 1.00 // 1 50 ENSTTRP00000004565/1-662 MRRAVGFPAL CLL--LHAAG CLSRNNDHFL AIHQKKSGKP AFIYHHSQDI bmy_07952T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSP00000283228/1-657 MRRAVCFPAL CLLLNLHAAG CFSGNNDHFL AINQKKSGKP VFIYKHSQDI ENSBTAP00000020359/1-655 MRRAVGFPAL CLLLSLHAAG CLAKNNDHFL AIRQKKSGKP AFIYHHSQDI BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000004565/1-662 EKSLDIAPQN IQKHSYHSSS KAQISKRHQI VNSAFPRPAY DPSLNLLAMA bmy_07952T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSP00000283228/1-657 EKSLDIAPQK IYRHSYHSSS EAQVSKRHQI VNSAFPRPAY DPSLNLLAMD ENSBTAP00000020359/1-655 EKSLDIAPQK IHKHNYHSSS EAQIGRHHQI VNSAFPKPAY DPSLNLLAMA BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004565/1-662 GQDHEVENLP IPAANVIVVT LQVDVNRLNI TLLRIFRQGV AAALGLLPQQ bmy_07952T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSP00000283228/1-657 GQDLEVENLP IPAANVIVVT LQMDVNKLNI TLLRIFRQGV AAALGLLPQQ ENSBTAP00000020359/1-655 GQDLEVENRP VPAANVIVVT LQMDVNRLNI TLLRIFRQGV AAALGLLPQQ BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000004565/1-662 VHINRLIGKK NSVELFVSPI NGKAGISDAL PSEEVLRSLN INVLHQSLSQ bmy_07952T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSP00000283228/1-657 VHINRLIGKK NSIELFVSPI NRKTGISDAL PSEEVLRSLN INVLHQSLSQ ENSBTAP00000020359/1-655 VHINRLIEKK NSVELFVSPI NRKAGFSDAL PSEEVLRSLN INVLHQSLSQ BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000004565/1-662 FGITEVSPEK NVLQGQHEAD KIWSKEGFYA VVIFLSIFVI IVTCLMXXXX bmy_07952T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSP00000283228/1-657 FGITEVSPEK NVLQGQHEAD KIWSKEGFYA VVIFLSIFVI IVTCLMILYR ENSBTAP00000020359/1-655 FGITDVSPEK NVLQGQHEAD KIWSKEGFYA VVIFLSIFVI IVTCLMILYR BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000004565/1-662 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXQVPK-LN bmy_07952T0/1-591 ---------- ---------- ---------- ---------- ---------- ENSP00000283228/1-657 LKERFQLSLR QDKEKNQEIH LSPITLQPAL SEAKTVHSMV QPEQAPKVLN ENSBTAP00000020359/1-655 LKEKFQLSLR QDKEKNQEIH LSPIVLQPAH SEDKTANSMV QPEQAPKVLS BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000004565/1-662 VVVNLQDQYT -EIKGT--TS VCPSPFKVKP IGLQKKRGSN VSLTLDMSSL bmy_07952T0/1-591 MVASGAGTSS NNSSNSSSSS VS-------- ---YQRRGSN VSLTLDMSSL ENSP00000283228/1-657 VVVDPQGRGA PEIKATTATS VCPSPFKMKP IGLQERRGSN VSLTLDMSSL ENSBTAP00000020359/1-655 VVVDPQGRYT PEIKAT--TS VCPSPFKMKP IGLQERRGSN VSLTLDMSSL BACU016426/1-311 ---------- ---------- ---------- ---------- ------MSSL 351 400 ENSTTRP00000004565/1-662 GNVEPFVATP TPREKVAMEY LQSASRILTR SQLRDVVASS HLLQSEFMEI bmy_07952T0/1-591 GNVEPFVATP TPREKVAMEY LQSASRILTR SQLRDVVASS HLLQSEFMEI ENSP00000283228/1-657 GNIEPFVSIP TPREKVAMEY LQSASRILTR SQLRDVVASS HLLQSEFMEI ENSBTAP00000020359/1-655 GNVEPFVAIP TPREKVAMEY LQSASRILTR SQLRDVVASS HLLQSEFMEI BACU016426/1-311 GNVEPFVATP TPREKVAMEY LQSASRILTR SQLRDVVASS HLLQSEFMEI 401 450 ENSTTRP00000004565/1-662 PMNFVDPKEI DIPCHGTKNR YKTILPNPLS RVCLRPKNVT NSLSTYINAN bmy_07952T0/1-591 PMNFVDPKEI DIPCHGTKNR YKTILPNPLS RVCLRPKNVT NSLSTYINAN ENSP00000283228/1-657 PMNFVDPKEI DIPRHGTKNR YKTILPNPLS RVCLRPKNVT DSLSTYINAN ENSBTAP00000020359/1-655 PMNFVDPKEI DIPRHGTKNR YKTILPNPLS RVCLRPKNVT DSLSTYINAN BACU016426/1-311 PMNFVDPKEI DIPCHGTKNR YKTILPNPLS RVCLRPKNVT NSLSTYINAN 451 500 ENSTTRP00000004565/1-662 YIRGYSGKEK AFIATQGPMI NTVNDFWQMV WQEDSPVIVM ITKLKEKNEK bmy_07952T0/1-591 YIRGYSGKEK AFIATQGPMI NTVNDFWQMV WQEDSPVIVM ITKLKEKNEK ENSP00000283228/1-657 YIRGYSGKEK AFIATQGPMI NTVDDFWQMV WQEDSPVIVM ITKLKEKNEK ENSBTAP00000020359/1-655 YIRGYSGKEK AFIATQGPMI NTVNDFWQMV WQEDSPVIVM ITKLKEKNEK BACU016426/1-311 YIRGYSGKEK AFIATQGPMI NTVNDFWQMV WQEDSPVIVM ITKLKEKNEK 501 550 ENSTTRP00000004565/1-662 CVLYWPEKRG IYGKVEVLVI NVNECDNYTV RNLVLKQGSH TQHVKHYWYT bmy_07952T0/1-591 CVLYWPEKRG IYGKVEVLVI NVNECDNYTV RNLVLKQGSH TQHVKHYWYT ENSP00000283228/1-657 CVLYWPEKRG IYGKVEVLVI SVNECDNYTI RNLVLKQGSH TQHVKHYWYT ENSBTAP00000020359/1-655 CVLYWPEKRG IYGKVEVLVI SVNECDNYTV RNLVLKQGSH TQRVKHYWYT BACU016426/1-311 CVLYWPEKRG IYGKVEVLVI NVNECDNYTV RNLVLKLGSH TQHVKHYWYT 551 600 ENSTTRP00000004565/1-662 SWPDHKTPAS AQPLLQLMLD VEEDRLASVG RGPVIVHCXX XXXXXXXXXX bmy_07952T0/1-591 SWPDHKTPAS AQPLLQLMLD VEEDRLASVG RGPVVVHCSA GIGRTGCFIA ENSP00000283228/1-657 SWPDHKTPDS AQPLLQLMLD VEEDRLASQG RGPVVVHCSA GIGRTGCFIA ENSBTAP00000020359/1-655 SWPDHKTPDS AQPLLQLMLD VEEDRLASAG RGPVVVHCSA GIGRTGCFIA BACU016426/1-311 SWPDHKTPAS AQPLLQLMLD VEEDRLASVG RGPVVVHCSA GIGRTGCFIA 601 650 ENSTTRP00000004565/1-662 XXXXXXXXXX XXXXXXXXXX XXXXXXXGGM ---------- ---------- bmy_07952T0/1-591 TSIGCRQLRE EGVVDALSIV CQLRVDRSGI EQDFGLLIFR TLEAKHEQSL ENSP00000283228/1-657 TSIGCQQLKE EGVVDALSIV CQLRMDRGGM ---------- ---------- ENSBTAP00000020359/1-655 TSIGCRQLRE EGVVDALSIV CQLRVDRGGM ---------- ---------- BACU016426/1-311 TSIGCRQLRE EGVVDALSIV CQLRVDRGGM ---------- ---------- 651 700 ENSTTRP00000004565/1-662 ---------- ---------- ---------- ---------- ---------- bmy_07952T0/1-591 SGKWRLNFTW RFLPASSSGT QVKGFQIVHV QKQQCLFKNE RVVMDLCNGT ENSP00000283228/1-657 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020359/1-655 ---------- ---------- ---------- ---------- ---------- BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000004565/1-662 ---------- ---------- ---------- ---------- ---------- bmy_07952T0/1-591 SQNQQWMWTE DGKLLHVKSA LCLGISDSSG GPSRSAIFAP CSRAPRWTCY ENSP00000283228/1-657 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020359/1-655 ---------- ---------- ---------- ---------- ---------- BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000004565/1-662 ---------- ---------- ---------- ------VQTS EQYEFVHHAL bmy_07952T0/1-591 EKEGFLEVEN ASLFLKKQGF RVVVKKGRKY LHSWMKIDVN EEGKPVNESL ENSP00000283228/1-657 ---------- ---------- ---------- ------VQTS EQYEFVHHAL ENSBTAP00000020359/1-655 ---------- ---------- ---------- ------VQTS EQYEFVHHAL BACU016426/1-311 ---------- ---------- ---------- ------VQTS EQYEFLHHAL 801 850 ENSTTRP00000004565/1-662 CLYESRRQKL SSDSLK---- ---------T YQTIALG--- ---------- bmy_07952T0/1-591 CSKKAG---L GAEVSVRSTR NTTPPQIPTT FNALPYSPGH LISNTTETFT ENSP00000283228/1-657 CLYESR---L SAETVQ---- ---------- ---------- ---------- ENSBTAP00000020359/1-655 CLYESR---L SAETVQ---- ---------- ---------- ---------- BACU016426/1-311 CLYESR---L AAETVQ---- ---------- ---------- ---------- 851 900 ENSTTRP00000004565/1-662 ---------- ---------- ---------- ---------- ---------- bmy_07952T0/1-591 RSTTENYSQN SSQRQHPDLQ MAGTTSWVPW TTQPFSSTTE EFHSGANYPV ENSP00000283228/1-657 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020359/1-655 ---------- ---------- ---------- ---------- ---------- BACU016426/1-311 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000004565/1-662 ----- bmy_07952T0/1-591 HFSPF ENSP00000283228/1-657 ----- ENSBTAP00000020359/1-655 ----- BACU016426/1-311 -----