KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:24 2014 Check: 00 .. Name: ENSBTAP00000020381/1-873 Len: 880 Check: 6566 Weight: 1.00 Name: ENSTTRP00000005104/1-872 Len: 880 Check: 1689 Weight: 1.00 Name: ENSP00000378938/1-873 Len: 880 Check: 5231 Weight: 1.00 Name: bmy_08358T0/1-880 Len: 880 Check: 7617 Weight: 1.00 Name: BACU013221/1-873 Len: 880 Check: 6948 Weight: 1.00 // 1 50 ENSBTAP00000020381/1-873 -------MAS RRKSTTPCMV LASEQDPDLE LVSDLDEGPP VLTPIENTRT ENSTTRP00000005104/1-872 -------MAS RRKSTTPCMV LASEQDPDLE LVSDLDEGPP VLTPVENTRA ENSP00000378938/1-873 -------MAS RRKSTTPCMV LASEQDPDLE LISDLDEGPP VLTPVENTRA bmy_08358T0/1-880 MRRKXWQMAS RRKSTTPCMV LASEQDPDLE LISDLDEGPP VLTPVENTRA BACU013221/1-873 -------MAS RRKSTTPCMV LASEQDPDLE LISDLDEGPP VLTPVENTRA 51 100 ENSBTAP00000020381/1-873 ESVSSDEEVH ESVDSDNQQN KKVEGGYECK YCTFQTPDLN MFTFHVDSEH ENSTTRP00000005104/1-872 ESISSDEEVH ESVDSDNQQN KKVEGGYECK YCTFQTPDLN MFTFHVDSEH ENSP00000378938/1-873 ESISSDEEVH ESVDSDNQQN KKVEGGYECK YCTFQTPDLN MFTFHVDSEH bmy_08358T0/1-880 ESISSDEEVH ESMDSDNQQN KKVEGGYECK YCTFQTPDLN MFTFHVDSEH BACU013221/1-873 ESISSDEEVH ESVDSDNQQN KKVEGGYECK YCTFQTPDLN MFTFHVDSEH 101 150 ENSBTAP00000020381/1-873 PNVVLNSSYV CVECNFLTKR YDALSEHNLK YHPGEENFKL TMVKRNNQTI ENSTTRP00000005104/1-872 PNVVLNSSYV CVECNFLTKR YDALSEHNLK YHPGEENFKL TMVKRNNQTI ENSP00000378938/1-873 PNVVLNSSYV CVECNFLTKR YDALSEHNLK YHPGEENFKL TMVKRNNQTI bmy_08358T0/1-880 PNVVLNSSYV CVECNFLTKR YDALSEHNLK YHPGEENFKL TMVKRNNQTI BACU013221/1-873 PNVVLNSSYV CVECNFLTKR YDALSEHNLK YHPGEENFKL TMVKRNNQTI 151 200 ENSBTAP00000020381/1-873 FEQTINDLTF DGSFVKEENS EQAESTEVSS SGISISKTPI MKMMKNKVEN ENSTTRP00000005104/1-872 FEQTINDLTF DGSFVKEENS EQAESTEVSS SGISISKTPI MKMMKNKVEN ENSP00000378938/1-873 FEQTINDLTF DGSFVKEENA EQAESTEVSS SGISISKTPI MKMMKNKVEN bmy_08358T0/1-880 FEQTINDLTF DGSFVKEENS EQAESTEVSS SGISISKTPI MKMMKNKVEN BACU013221/1-873 FEQTINDLTF DGSFVKEENS EQAESTEVSS SGISISKTPI MKMMKNKVEN 201 250 ENSBTAP00000020381/1-873 KRITVHRNSA EDIPEEKENE IKPDREETVE NPSSSASESN ASTSVVNRIH ENSTTRP00000005104/1-872 KRITVHHNSV EDVPEEKENE IKPDREGTVE NPSSSASESN TSTSIVNRIH ENSP00000378938/1-873 KRIAVHHNSV EDVPEEKENE IKPDREEIVE NPSSSASESN TSTSIVNRIH bmy_08358T0/1-880 XRITVHHNSV EDVPEEKENE IKPDREGTVE NPSSSASESN TSTSIVNRIH BACU013221/1-873 KRITVHHNSV EDVPEEKENE IKPDREGTVE NPSSSASESN TSTSIVNRIH 251 300 ENSBTAP00000020381/1-873 PHAASTVVAP AAVLPGLAQV ITAVSAQQNS SLIPKVLIPV NSIPTYNAAL ENSTTRP00000005104/1-872 PNTASTVVTP AAVLPGLAQV ITAVSAQQNS NLIPKVLIPV NSIPTYNAAL ENSP00000378938/1-873 PSTASTVVTP AAVLPGLAQV ITAVSAQQNS NLIPKVLIPV NSIPTYNAAL bmy_08358T0/1-880 PNTASTVVTP AAVLPGLAQV ITAVSAQQNS SLIPKVLIPV NSIPTYNAAL BACU013221/1-873 PNTASTVVTP AAVLPGLAQV ITAVSAQQNS NLIPKVLIPV NSIPTYNAAL 301 350 ENSBTAP00000020381/1-873 DNNPLLLNTY NKFPYPTMSE ITVLSAQAKY TEEQIKIWFS AQRLKHGVSW ENSTTRP00000005104/1-872 DNNPLLLNTY NKFPYPTMSE ITVLSAQAKY TEEQIKIWFS AQRLKHGVSW ENSP00000378938/1-873 DNNPLLLNTY NKFPYPTMSE ITVLSAQAKY TEEQIKIWFS AQRLKHGVSW bmy_08358T0/1-880 DNNPLLLNTY NKFPYPTMSE ITVLSAQAKY TEEQIKIWFS AQRLKHGVSW BACU013221/1-873 DNNPLLLNTY NKFPYPTMSE ITVLSAQAKY TEEQIKIWFS AQRLKHGVSW 351 400 ENSBTAP00000020381/1-873 TPEEVEEARR KQFNGTVHTV PQTITVIPTH ISAGSNGLPS ILQTCQIVGQ ENSTTRP00000005104/1-872 TPEEVEEARR KQFNGTVHTV PQTITVIPTH ISTGSNGLPS ILQTCQIVGQ ENSP00000378938/1-873 TPEEVEEARR KQFNGTVHTV PQTITVIPTH ISTGSNGLPS ILQTCQIVGQ bmy_08358T0/1-880 TPEEVEEARR KQFNGTVHTV PQTITVIPTH ISTGSNGLPS ILQTCQIVGQ BACU013221/1-873 TPEEVEEARR KQFNGTVHTV PQTITVIPTH ISTGSNGLPS ILQTCQIVGQ 401 450 ENSBTAP00000020381/1-873 PGLVLTQVGG TNTLPVTAPI ALTVAGVPNQ TNVQKSQVPT TQPTTETKPA ENSTTRP00000005104/1-872 PGLVLTQVAG TNTLPVAAPI ALTVAGVPNQ TNAQKSQXXX XXXXXXXXXX ENSP00000378938/1-873 PGLVLTQVAG TNTLPVTAPI ALTVAGVPSQ NNIQKSQVPA AQPTAETKPA bmy_08358T0/1-880 PGLVLTQVAG ANTLPVAAPI ALTVAGVPNQ TNAQKSQLPA AQPTAETKPA BACU013221/1-873 PGLVLTQVAG TNTLPVAAPI ALTVAGVPNQ TNAQKSQLPA TQPTAETKPA 451 500 ENSBTAP00000020381/1-873 IAAVPSAQLV KHEATLANPD SFGIRAKKTK EQLAELKVSY LKNQFPHDAE ENSTTRP00000005104/1-872 XXXXXXXXXX XXXXXXXXXX XXGVRAKKTK EQLAELKVS- LKNQFPHDSE ENSP00000378938/1-873 TAAVPTSQSV KHETALVNPD SFGIRAKKTK EQLAELKVSY LKNQFPHDSE bmy_08358T0/1-880 AAGAPSSQLV KNETAVANPD AFGVRAKKTK EQLAELKVSY LKNQFPHDSE BACU013221/1-873 AAGAPSSQLV KNETAVANPD AFGVRAKKTK EQLAELKVSY LKNQFPHDSE 501 550 ENSBTAP00000020381/1-873 IIRLMKITGL TKGEIKKWFS DTRYNQRNSK SNQCLHLNND SSATIIIDSS ENSTTRP00000005104/1-872 IIRLMKITGL TKGEIKKWFS DTRYNQRNSK SNQCLHLNND SSATIIIDSS ENSP00000378938/1-873 IIRLMKITGL TKGEIKKWFS DTRYNQRNSK SNQCLHLNND SSTTIIIDSS bmy_08358T0/1-880 IIRLMKITGL TKGEIKKWFS DTRYNQRNSK SNQCLHLNND SSATIIIDSS BACU013221/1-873 IIRLMKITGL TKGEIKKWFS DTRYNQRNSK SNQCLHLNND SSATIIIDSS 551 600 ENSBTAP00000020381/1-873 DETTESPAVV TSQQKQSWNP FPDFTPQKFK EKTAEQLRAL QASFLNSSVL ENSTTRP00000005104/1-872 DETTESPTVV TSQQKQSWNP FPDFTPQKFK EKTAEQLRAL QASFLNSSVL ENSP00000378938/1-873 DETTESPTVG TAQPKQSWNP FPDFTPQKFK EKTAEQLRVL QASFLNSSVL bmy_08358T0/1-880 DETTESPTVV TSQQKQSWNP FPDFTPQKFK EKTAEQLRAL QASFLNSSVL BACU013221/1-873 DETTESPTVV TSQQKQSWNP FPDFTPQKFK EKTAEQLRAL QASFLNSSVL 601 650 ENSBTAP00000020381/1-873 TEEELNRLRA QTKLTRREID AWFTEKKKSK ALKEEKVEVE ESNAGSSKEE ENSTTRP00000005104/1-872 TEEELNRLRA QTKLTRREID AWFTEKKKSK ALKEEKGEIE ESNAGSSKEE ENSP00000378938/1-873 TDEELNRLRA QTKLTRREID AWFTEKKKSK ALKEEKMEID ESNAGSSKEE bmy_08358T0/1-880 TEEELNRLRA QTKLTRREID AWFTEKKKSK ALKEEKGEIE ESNAGSSKEE BACU013221/1-873 TEEELNRLRA QTKLTRREID AWFTEKKKSK ALKEEKGEIE ESNAGSSKEE 651 700 ENSBTAP00000020381/1-873 AGETSPGDET SAPKSGSTGK ICKKTPEQLH MLKSAFVRTQ WPSPEEYDKL ENSTTRP00000005104/1-872 TGETSPGDES SAPKSGSTGK ICKKTPEQLH MLKSAFVRTQ WPSPEEYDKL ENSP00000378938/1-873 AGETSPADES GAPKSGSTGK ICKKTPEQLH MLKSAFVRTQ WPSPEEYDKL bmy_08358T0/1-880 TGETSPGDES SAPKSGSTGK ICKKTPEQLH MLKSAFVRTQ WPSPEEYDKL BACU013221/1-873 TGETSPGDES SAPKSGSTGK ICKKTPEQLH MLKSAFVRTQ WPSPEEYDKL 701 750 ENSBTAP00000020381/1-873 AEESGLARTD IVSWFGDTRY AWKNGNLKWY YYYQSANSSS MNGLSSLRKR ENSTTRP00000005104/1-872 AEESGLARTD IVSWFGDTRY AWKNGNLKWY YYYQSANSSS MNGLSSLRKR ENSP00000378938/1-873 AKESGLARTD IVSWFGDTRY AWKNGNLKWY YYYQSANSSS MNGLSSLRKR bmy_08358T0/1-880 AEESGLARTD IVSWFGDTRY AWKNGNLKWY YYYQSANSSS MNGLSSLRKR BACU013221/1-873 AEESGLARTD IVSWFGDTRY AWKNGNLKWY YYYQSANSSS MNGLSSLRKR 751 800 ENSBTAP00000020381/1-873 GRGRPKGRGR GRPRGRPRGG KRMNNWDRGP SLIKFKTGTA ILKDYYLKHK ENSTTRP00000005104/1-872 GRGRPKGRGR GRPRGRPRGS KRMNNWDRGP SLIKFKTGTA ILKDYYLKHK ENSP00000378938/1-873 GRGRPKGRGR GRPRGRPRGS KRINNWDRGP SLIKFKTGTA ILKDYYLKHK bmy_08358T0/1-880 GRGRPKGRGR GRPRGRPRGS KRMNNWDRGP SLIKFKTGTA ILKDYYLKHK BACU013221/1-873 GRGRPKGRGR GRPRGRPRGS KRMNNWDRGP SLIKFKTGTA ILKDYYLKHK 801 850 ENSBTAP00000020381/1-873 FLNEQDLDEL VNRSHMGYEQ VREWFAERQR RSELGIELFE ENEEEDEVID ENSTTRP00000005104/1-872 FLNEQDLDEL VNKSHMGYEQ VREWFAERQR RSELGIELFE ENEEEDEVID ENSP00000378938/1-873 FLNEQDLDEL VNKSHMGYEQ VREWFAERQR RSELGIELFE ENEEEDEVID bmy_08358T0/1-880 FLNEQDLDEL VNKSHMGYEQ VREWFAERQR RSELGIELFE ENEEEDEVID BACU013221/1-873 FLNEQDLDEL VNKSHMGYEQ VREWFAERQR RSELGIELFE ENEEEDEVID 851 900 ENSBTAP00000020381/1-873 DQEEEEEETD DSDTWEPPRH VKRKLSKSDD ENSTTRP00000005104/1-872 DQEEDEEETD DSDTWEPPRH VKRKLSKSDD ENSP00000378938/1-873 DQEEDEEETD DSDTWEPPRH VKRKLSKSDD bmy_08358T0/1-880 DQEEDEEETD DSDTWEPPRH VKRKLSKSDD BACU013221/1-873 DQEEDEEETD DSDTWEPPRH VKRKLSKSDD