KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:25 2014 Check: 00 .. Name: ENSP00000271620/1-453 Len: 468 Check: 4403 Weight: 1.00 Name: ENSBTAP00000020388/1-453 Len: 468 Check: 1687 Weight: 1.00 Name: ENSTTRP00000006610/1-431 Len: 468 Check: 7845 Weight: 1.00 Name: bmy_11132T0/1-422 Len: 468 Check: 2005 Weight: 1.00 Name: BACU007238/1-468 Len: 468 Check: 7915 Weight: 1.00 // 1 50 ENSP00000271620/1-453 ---------- MEDYLQGCRA -----ALQES RPLHVVLGNE ACDLDSTVSA ENSBTAP00000020388/1-453 ---------- MENYLQGCRA -----ALQES RPIHVVLGNE ACDLDSMVSA ENSTTRP00000006610/1-431 ---------- MEDYLQGCRV -----ALQES RPIHVVLGNE ACDLDSMVSA bmy_11132T0/1-422 ---------- MEDYLQGCRA -----ALQ-- ---------- ---------- BACU007238/1-468 MIPVGLKTLG GVSFPETGRT RNGDKTERES RPIHVVLGNE ACDLDSMVSA 51 100 ENSP00000271620/1-453 LALAFYLAKT TEAEEVFVPV LNIKRSELPL RGDIVFFLQK VHIPESILIF ENSBTAP00000020388/1-453 LALAFYLAKT TEAEEVFVPV LNIKRSELPL RGDNVFFLQK IHIPESVLIF ENSTTRP00000006610/1-431 LALAFYLAKT TEAEEVFVPV LNIKRSELPL RGDNVFFLQK THIPESLLIF bmy_11132T0/1-422 ---------T TEAEEVFVPV LNIKRSELPL RGDNVFFLQK THIPESLLIF BACU007238/1-468 LALAFYLAKT TEAEEVFVPV LNIKRSELPL RGDNVFFLQK THIPESLLIF 101 150 ENSP00000271620/1-453 RDEIDLHALY QAGQLTLILV DHHILSKSDT ALEEAVAEVL DHRPIEPKHC ENSBTAP00000020388/1-453 RDEIDLHALH QAGQLTLILV DHHVLPKSDA ALEEAVAEVL DHRPIDQRHC ENSTTRP00000006610/1-431 RDEIDLHALQ QAGQLTLILV DNHVLPKSDA ALEEAVAEVL DHRPIDQKHC bmy_11132T0/1-422 RDEIDLHALQ QAGQLTLILV DHHVLPKSDA ALEEAVAEVL DHRPIDQKHC BACU007238/1-468 RDEIDLHALQ QAGQLTLILV DHHVLPKSDA ALEEAVAEVL DHRPIDQKHC 151 200 ENSP00000271620/1-453 PPCHVSVELV GSCATLVTER ILQGAPEILD RQTAALLHGT IILDCVNMDL ENSBTAP00000020388/1-453 PPCHVSVELV GSCATLVAER ILQGAPEILD RQTAALLHGT ILLDCVNMDL ENSTTRP00000006610/1-431 PPCHVSVELV GSCATLVAER ILQGAPEILD WQTAALLHGT IILDCVNMDP bmy_11132T0/1-422 PPCHVSVELV GSCATLVAER ILQRAPEILD RQTAALLQGA IILDCVNMDL BACU007238/1-468 PPCHVSVELV GSCATLVAER ILQRAPEILD RQTAALLHGA IILDCVNMDL 201 250 ENSP00000271620/1-453 KIGKATPKDS KYVEKLEALF PDLPKRNDIF DSLQKAKFDV SGLTTEQMLR ENSBTAP00000020388/1-453 KIGKATLKDS HYVEKLEALF PDLPSRNDIF DSLQKAKFDV SGLTTEQMLR ENSTTRP00000006610/1-431 KIGKATLKDN QYVENLEALF PNLPKRNDIF DSLQKAKFDV SGLTTEQMLR bmy_11132T0/1-422 KIGKATLKDN RLVEKLEALF PDLPNRNDIF DSLQKAKFDV SGLTTEQMLR BACU007238/1-468 KIGKATLKDN QYVEKLEALF PDLPNRNDIF DSLQKAKFDV SGLTTEQMLR 251 300 ENSP00000271620/1-453 KDQKTIYRQG VKVAISAIYM DLEAFLQRSN LLADLHAFCQ AHSYDVLVAM ENSBTAP00000020388/1-453 KDQKTISRQG TKVAISAIYM DMEAFLQRSG LLADLRAFCQ AHSYDALVAM ENSTTRP00000006610/1-431 KDQKTVSRQG TKVAISAIYM DLEAFLQRSG LIADLHAFCQ AHSYDALVAM bmy_11132T0/1-422 KDQKTISRQG TKVAISAIYM DLEAFLQRSG LIADLHAFCQ AHSYDALVAM BACU007238/1-468 KDQKTISRQG TKVAISAIYM DLEAFLQRSG LIADLHAFCQ AHSYDALVAM 301 350 ENSP00000271620/1-453 TIFFNTHNEP VRQLAIFCPH VALQTTICEV LERSHSPPLK LTPASSTHPN ENSBTAP00000020388/1-453 TIFFNTYNEP VRQLAVFCPH AALRMTICGI LEHSHSPPLK LTPVPSSHPD ENSTTRP00000006610/1-431 TIFFNTCNEP VRQLAVFCPH TALRVTVCGV LERSHSPSLK LTPAPSIHPN bmy_11132T0/1-422 TIFFNTYNEP VRQLAVFCPH AALRVTVCGV LEQSHSPSLK LTPAPSIHPN BACU007238/1-468 TIFFNTYNEP VRQLAVFCPH AALRVTVCGV LERSHSPSLK LTPAPSIHPN 351 400 ENSP00000271620/1-453 LHAYLQGNTQ VSRKKLLPLL QEALSAYFDS MKIPSGQPET ADVSREQVDK ENSBTAP00000020388/1-453 LQAYLQGNTQ ISRKKVLPLL QEALSAYFDS TNIPLGQPET EGVSREQVDK ENSTTRP00000006610/1-431 LQAYLQGNTQ VSRKKLLPLL QEALSAYFDS TNIPSGQPET EGVSREQVDK bmy_11132T0/1-422 LQAYLQGNTQ VSRKKLLPLL QEALSAYFDS TNIPSGQPET EGVSREQVDK BACU007238/1-468 LQAYLQGNTQ VSRKKLLPLL QEALSAYFDS TNIPSGQPET EGVSREQVDK 401 450 ENSP00000271620/1-453 ELDRASNSLI SGLSQDEEDP PLPPTPMNSL VDECPLDQGL PKLSAEAVFE ENSBTAP00000020388/1-453 ELDRAGNSLL SGLSQDEEEP PLPPTPMNSL VDECPLDQGL PKFSAEVIFE ENSTTRP00000006610/1-431 ELDRAGNSLI PGLSQDEEEP PLPPTPMNSL VDECPLDQGL PKLSAE---- bmy_11132T0/1-422 ELDRAGNSLI PGLSQDEEEP PLPPTPMNSL VDECPLDQGL PKFSAEVIFE BACU007238/1-468 ELDRAGNSLI PGLSQDEEEP PLPPTPMNSL VDECPLDQGL PKFSAEVIFE 451 500 ENSP00000271620/1-453 KCSQISLSQS TTASLSKK ENSBTAP00000020388/1-453 KCSQISLSEP TTASLSKK ENSTTRP00000006610/1-431 ---------- -------- bmy_11132T0/1-422 KCSQISLSES TTASRSKK BACU007238/1-468 KCSQISLSES TTASRSKK