KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:25 2014 Check: 00 .. Name: ENSP00000366015/1-346 Len: 346 Check: 8086 Weight: 1.00 Name: ENSBTAP00000020392/1-344 Len: 346 Check: 5042 Weight: 1.00 Name: bmy_20132T0/1-279 Len: 346 Check: 7781 Weight: 1.00 Name: ENSTTRP00000001243/1-343 Len: 346 Check: 8019 Weight: 1.00 Name: BACU018473/1-344 Len: 346 Check: 6102 Weight: 1.00 // 1 50 ENSP00000366015/1-346 MLKKPLSAVT WLCIFIVAFV SHPAWLQKLS KHKTPAQPQL KAANCCEEVK ENSBTAP00000020392/1-344 MLKKTLSAVA WLCIFLVAFV SHPVWPQKPP KRKTPA--EL TAATCCEEAK bmy_20132T0/1-279 MLKETLSAVA WLCMFTVAFV SHPVWPQKPP KRKTPA--EL TVAGCCEEAK ENSTTRP00000001243/1-343 MLKETLSAVA WLCIFTVAFV SHPVWPQKPP KRKTPA--EL TVAGCCEEAK BACU018473/1-344 MLKETLSAVA WLCIFTVAFV SHPVWPQKPP KRKTPA--EL TVAGCCEEAK 51 100 ENSP00000366015/1-346 ELKAQVANLS SLLSELNKKQ ERDWVSVVMQ VMELESNSKR MESRLTDAES ENSBTAP00000020392/1-344 ALQAQIANLS SLLSDLGKKQ ERDWVSVVMQ VMELESSAKS METRLTEAES bmy_20132T0/1-279 ELKXQIANLS SLLSDLSRKQ ERDWVSVXMQ VMELESNSKX MQSRLTEAES ENSTTRP00000001243/1-343 ELRAQIANLS SLLSDLSRKQ ERDWVSVVMQ VMELESNSKR MESRLTEAES BACU018473/1-344 ELKAQIANLS SLLSDLSRKQ ERDWVNVVMQ VMELESNSKR MESRLTEAES 101 150 ENSP00000366015/1-346 KYSEMNNQID IMQLQAAQTV TQTSADAIYD CSSLYQKNYR ISGVYKLPPD ENSBTAP00000020392/1-344 KYSEMNNQIG IMQLQAAQTV TQTSADAIYD CSSLYQKNYR ISGVYKLPPD bmy_20132T0/1-279 KYSEMNNQIG IMQLQAAQTV TQTLADAIYD CSSLYQKNYR ISGVYKLPPD ENSTTRP00000001243/1-343 KYSEMNNQMG IMQLQAAQTV TQTLADAIYD CSSLYQKNYR ISGVYKLPPD BACU018473/1-344 KYSEMNNQIG IMQLQAAQTV TQTLADAIYD CSSLYQKNYR ISGVYKLPPD 151 200 ENSP00000366015/1-346 DFLGSPELEV FCDMETSGGG WTIIQRRKSG LVSFYRDWKQ YKQGFGSIRG ENSBTAP00000020392/1-344 DFLGSPELEV FCDMETSGGG WTIIQRRKSG LVSFYRDWKQ YKQGFGSIRG bmy_20132T0/1-279 DFLGSPELE- ---------- ---------- ---------- ---------- ENSTTRP00000001243/1-343 DFLGSPELEV FCDMETSGGG WTTIQRRKSG LVSFYRDWKQ YKQGFGSISG BACU018473/1-344 DFLGSPELEV FCDMETSGGG WTTIQRRKSG LVSFFRDWKQ YQQGFGSIHG 201 250 ENSP00000366015/1-346 DFWLGNEHIH RLSRQPTRLR VEMEDWEGNL RYAEYSHFVL GNELNSYRLF ENSBTAP00000020392/1-344 DFWLGNDHIH RLSRRPTRLR VEMQDWEGNM RYAEYSHFVL GNELNSYRLF bmy_20132T0/1-279 ---------- ---------- ----DWEGNM RYAEYSHFVL GNERNSYRLF ENSTTRP00000001243/1-343 DFWLGNDHIH RLSRRPTRLR VEMEDW-GNM RYAEYSHFVL GNERNSYRLF BACU018473/1-344 DFWLGNDHIH RLSRRPTRLR VEMEDWEGNM RYAEYSHFVL GNERNSYRLF 251 300 ENSP00000366015/1-346 LGNYTGNVGN DALQYHNNTA FSTKDKDNDN CLDKCAQLRK GGYWYNCCTD ENSBTAP00000020392/1-344 LGNYSGDVGN DALIYHNNTA FSTKDKDNDN CLDKCAQLRK GGYWYNCCTD bmy_20132T0/1-279 LGNYSGNVGN DALVYHNNTA FSTKDKDNDN CLDKCAQLRK GGYWYNCCTD ENSTTRP00000001243/1-343 LGNYSGNVGN DALVYHNNTA FSTKDKDNDN CLDKCAQLRK GGYWYNCCTD BACU018473/1-344 LGNYSGNVGN DALVYHNNTA FSTKDKDNDN CLDKCAQLRK GGYWYNCCTD 301 350 ENSP00000366015/1-346 SNLNGVYYRL GEHNKHLDGI TWYGWHGSTY SLKRVEMKIR PEDFKP ENSBTAP00000020392/1-344 SNLNGVYYRL GEHNKHLDGI TWYGWHGSSY SLKRVEMKIR PEDFQP bmy_20132T0/1-279 SNLNGVYYRL GEHNRHLDGI TWYGWHGSSY SLKRVEMKIR PEDFQP ENSTTRP00000001243/1-343 SNLNGVYYRL GEHSKHLDGI TWYGWHGSSY SLKRVEMKIR PEDFQP BACU018473/1-344 SNLNGVYYRL GEHNKHLDGI TWYGWHGSSY SLKRVEMKIR PEDFQP