KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:30 2014 Check: 00 .. Name: ENSTTRP00000011560/1-788 Len: 1089 Check: 9663 Weight: 1.00 Name: ENSP00000255120/1-788 Len: 1089 Check: 5309 Weight: 1.00 Name: ENSBTAP00000020401/1-777 Len: 1089 Check: 2528 Weight: 1.00 Name: bmy_07225T0/1-774 Len: 1089 Check: 2016 Weight: 1.00 Name: BACU000320/1-971 Len: 1089 Check: 5874 Weight: 1.00 // 1 50 ENSTTRP00000011560/1-788 ---------- ---------- --------KM PLLLLPLQIK WRXXXXXXXX ENSP00000255120/1-788 ---------- ---------- --------MA MESTATAAVA AELVSADKIE ENSBTAP00000020401/1-777 ---------- ---------- --------MA AESTATAAIT AELVSADKIE bmy_07225T0/1-774 ---------- ---------- ---------- ---------- ---------- BACU000320/1-971 MAASCILLHT GQKMPLIGLG TWKSEPGQVK AVIKYALSIG YRHIDCAAIY 51 100 ENSTTRP00000011560/1-788 ---------- ---------- ---------- ---------- ---------- ENSP00000255120/1-788 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020401/1-777 E--------- ---------- ---------- ---------- ---------- bmy_07225T0/1-774 ---------- ---------- ---------- ---------- ---------- BACU000320/1-971 GNETEIGEAL KENVGPGKLV PREELFVTSK LWNTKHHPED VEPALRKTLA 101 150 ENSTTRP00000011560/1-788 ---------- ---------- -XXXXXXXXX XXX------- ---------- ENSP00000255120/1-788 ---------- ---------- -DVPAPSTSA DKV------- ---------- ENSBTAP00000020401/1-777 ---------- ---------- -DAPAPSTSA DKV------- ---------- bmy_07225T0/1-774 ---------- ---------- -MDPRPFQRS GQI------- ---------- BACU000320/1-971 DLQLEYLDLY LMHWPYAFER GDNPFPKNAD GTIRYDSTHY KETWKALEAL 151 200 ENSTTRP00000011560/1-788 ---------- ---------- ---------- ---------- ---------- ENSP00000255120/1-788 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020401/1-777 ---------- ---------- ---------- ---------- ---------- bmy_07225T0/1-774 --------IG LLTL------ ---------- ---------- ---------- BACU000320/1-971 VAKGLVRALG LSNFSSRQID DVLSVASVRP AVLQVECHPY LAQNELIAHC 201 250 ENSTTRP00000011560/1-788 ---------- ---------- ---------- ---------- ---------- ENSP00000255120/1-788 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020401/1-777 ---------- ---------- ---------- ---------- ---------- bmy_07225T0/1-774 ---------- ---------- ---------- ---------- ---------- BACU000320/1-971 QARGLEVTAY SPLGSSDRAW RDPAEPVLLE EPVVLALAEE HGRSPAQILL 251 300 ENSTTRP00000011560/1-788 ---------- ---------- ---------- ---------- ---------- ENSP00000255120/1-788 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000020401/1-777 ---------- ---------- ---------- ---------- ---------- bmy_07225T0/1-774 ---------- ---------- --QLKAFKLC F--------- ---------- BACU000320/1-971 RWQVQRKVSC IPKSVTPSHI LQNIQVFDFT FSLEEMKQLD ALNKNLRFIV 301 350 ENSTTRP00000011560/1-788 ---------- ---------- ---------- --XXXXXXXX XXXXXXXXXX ENSP00000255120/1-788 ---------- ---------- ---------- -----ESLDV DSEAKKLLGL ENSBTAP00000020401/1-777 ---------- ---------- ---------- -----ESLDV DSEAKKLLGL bmy_07225T0/1-774 ---------- ---------- ---------- --ISVTLLDV DSEAKKLLGL BACU000320/1-971 PMLTTLSRPL VHHLRRTMAA ESTATAAITA ELVSADNLDV DSEAKKLLGL 351 400 ENSTTRP00000011560/1-788 XXXXXXXXXX XXXXXXXXXX XXXXGKKYGE TANECGEAFF FYGKSLLELA ENSP00000255120/1-788 GQKHLVMGDI PAAVNAFQEA ASLLGKKYGE TANECGEAFF FYGKSLLELA ENSBTAP00000020401/1-777 GQKHLVMGDI PAAVNAFQEA ASLLGKKYGE TANECGEAFF FYGKSLLELA bmy_07225T0/1-774 GQKHLVMGDI PAAVNAFQEA ASLLGKKYGE TANECGEAFF FYGKSLLELA BACU000320/1-971 GQKHLVMGDI PAAVNAFQEA ASLLGKKYGE TANECGEAFF FYGKSLLELA 401 450 ENSTTRP00000011560/1-788 RMENGVLGNA LEGVHVEEEE GEKTEEETLV ENNDNIDEEA REELREQVYD ENSP00000255120/1-788 RMENGVLGNA LEGVHVEEEE GEKTEDESLV ENNDNIDEEA REELREQVYD ENSBTAP00000020401/1-777 RMENGVLGNA LEGVHVEEEE GEKTEEESLV ENNDNIDEEA REELREQVYD bmy_07225T0/1-774 RMENGVLGNA LEGVHVEEEE GEKTEEETLV ENNDNIDEEA REELREQVYD BACU000320/1-971 RMENGVLGNA LEGVHVEEEE GEKTEEETLV ENNDNIDEEA REELREQVYD 451 500 ENSTTRP00000011560/1-788 AMGEK--EQK TEDKSLVKPE TDKEQETDME KAGR-DMDIS EPAGELQKVE ENSP00000255120/1-788 AMGEKEEAKK TEDKSLAKPE TDKEQDSEME KGGREDMDIS KSAEEPQEKV ENSBTAP00000020401/1-777 AMGEK-EAQK TEDKSLVKPE MDKEQETEME KGGREDMDIG EPAEELQEKV bmy_07225T0/1-774 AMGEK-EAKK TEDKSLVKPE TDKEQETDME KGGREDMDIS EPAGELQEKV BACU000320/1-971 AMGEK-EAKK TEDKSLVKPE TDKEQETDME KGGREDMDIS EPAGELQEKV 501 550 ENSTTRP00000011560/1-788 SXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000255120/1-788 DLTLDWLTET SEEAKGGAAP EGPNEAEVTS GKPEQEVPDA EEEKSVSGTD ENSBTAP00000020401/1-777 KSAPDQLTET TEEGKGAAAP EGLSEAEVTS KKPDQEIPGA EEGKSVSETD bmy_07225T0/1-774 ESTPDQLTET TKEGKGTAAP EGLNEAEVTS KKPEQETPDA EEGKSVSGTD BACU000320/1-971 ESTPDQLTET TKEGKGTAAP EGLNEAEVTS QKPEQETPDA EEGKSVSGTD 551 600 ENSTTRP00000011560/1-788 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000255120/1-788 VQEECREKGG QEKQGEVIVS IEEKPKEVSE EQPVVTLEKQ GTAVEVEAES ENSBTAP00000020401/1-777 VQEECREKGG ---QGEVIVS IEEKPKEASK EQPVVTLEKQ GTPVEIEA-- bmy_07225T0/1-774 VQEECREKGG ---QGEVIAS IEEKPKEASE EQPVVTLEKQ GTAVEIEA-- BACU000320/1-971 VQEECREKGG ---QGEVIAS IEEKPKEASE EQPVVTLEKQ GTAVEIEA-- 601 650 ENSTTRP00000011560/1-788 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000255120/1-788 LDPTVKPVDV GGDEPEEKVV TSENEAGKAV LEQLVGQEVP PAEESPEVTT ENSBTAP00000020401/1-777 ----VKPVDM GGDEPKEQVA ASESERGKAI LEQLVGQELP SAEESPEVTT bmy_07225T0/1-774 ----VKPVDV GGDEPKEQVA VSASEPGKAV LEQLVGQELP AAEESPEVTA BACU000320/1-971 ----VKPVDV GGDEPKEQVA VSASEPGKAV LEQLVGQELP AAEESPEVTA 651 700 ENSTTRP00000011560/1-788 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000255120/1-788 EAAEASAVEA GSEVSEKPGQ EAPVLPKDGA VNGPSVVGDQ TPIEPQTSIE ENSBTAP00000020401/1-777 QAADASAAEA GSEVSEKPGG QDTVLPQDGA VNGLSAAGDH ASTKPQTNAE bmy_07225T0/1-774 QAAEASAAEA GSEVSEKPGQ EDPVLPKDGA VNGLSAAGDH TPSEPKTDAE BACU000320/1-971 QAAEASAAEA GSEVSEKPGQ EDPVLPKDGA VNGLSAAGDH TPSEPKTDAE 701 750 ENSTTRP00000011560/1-788 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000255120/1-788 RLTETKDGSG LEEKVRAKLV PSQEETKLSV EESEAAGDGV DTKVAQGATE ENSBTAP00000020401/1-777 GLIGTKDGSA L-EKVRAELV PSQ-ETKLSV EESEAAGDGV ETEVAQGATE bmy_07225T0/1-774 GRTETKDGSG LEEKVRAELV PSQEETKLSI EESEAAGDGV ETKVAQGATE BACU000320/1-971 GWTETKDGSG LEEKVRAGLV PSQEETKLSI EESEAAGDGV ETKVAQGATE 751 800 ENSTTRP00000011560/1-788 XXXXXXXXXX XXXXXXXXXX XXXXXXXTEG SEEEDKENDK AEETPNDSLL ENSP00000255120/1-788 KSPEDKVQIA ANEETQEREE QMKEGEETEG SEEDDKENDK TEEMPNDSVL ENSBTAP00000020401/1-777 QSPEDKVKIA ANEEAQDKEE QMKEGEETEG SEEEDKENDK AEETLNDSAL bmy_07225T0/1-774 KSPEDKVKIA ANEETQDKEE QMKEGEETEG SEEEDKENDK AEETPNDSIL BACU000320/1-971 KSPEDKVKIA ANEETQDKEE QMKEGEETEG SEEEDKENDK AEETPNDSIL 801 850 ENSTTRP00000011560/1-788 ENKSLQENEE EEIGNLELAW DMLDLAKIIF KRQDTKEAQL YAAQAHLKLG ENSP00000255120/1-788 ENKSLQENEE EEIGNLELAW DMLDLAKIIF KRQETKEAQL YAAQAHLKLG ENSBTAP00000020401/1-777 ENKSLQENEE EEIGNLELAW DMLDLAKIIF KRQDTKEAQL YAAQAHLKLG bmy_07225T0/1-774 ENKSLQENEE EEIGNLELAW DMLDLAKIIF KRQDTKEAQL YAAQAHLKLG BACU000320/1-971 ENKSLQENEE EEIGNLELAW DMLDLAKIIF KRQDTKEAQL YAAQAHLKLG 851 900 ENSTTRP00000011560/1-788 EVSVESENYI QAVEEFQACL NLQEQYLEAH DRLLAETHYQ LGLAYGYNSQ ENSP00000255120/1-788 EVSVESENYV QAVEEFQSCL NLQEQYLEAH DRLLAETHYQ LGLAYGYNSQ ENSBTAP00000020401/1-777 EVSVESENYL QAVEEFQACL NLQEQYLEAH DRLLAETHYQ LGLAYGYNSQ bmy_07225T0/1-774 EVSVESENYI QAVEEFQACL NLQEQYLEAH DRLLAETHYQ LGLAYGYNSQ BACU000320/1-971 EVSVESENYI QAVEEFQACL NLQEQYLEAH DRLLAETHYQ LGLAYGYNSQ 901 950 ENSTTRP00000011560/1-788 YDEAVAQFSK SIEVIEKRMA VLNEHMKEAE GSPTEYEKEI EELKELLPEI ENSP00000255120/1-788 YDEAVAQFSK SIEVIENRMA VLNEQVKEAE GSSAEYKKEI EELKELLPEI ENSBTAP00000020401/1-777 YDEAVAQFSK SIEVIEKRMA VLNEQMKEAE GSPTEYEKEI EELKELLPEI bmy_07225T0/1-774 YDEAVAQFSK SIEVIEKRMA VLNEHMKEAE GSPTEYEKEI EELKELLPEI BACU000320/1-971 YDEAVAQFSK SIEVIEKRMA VLNEHMKEAE GSPIEYEKEI EELKELLPEI 951 1000 ENSTTRP00000011560/1-788 REKIEDAKES QRSGNVAELA LKATLVESST SGXXXXXXXX XXXXXXXXXX ENSP00000255120/1-788 REKIEDAKES QRSGNVAELA LKATLVESST SGFTPGGGGS SVSMIASRKP ENSBTAP00000020401/1-777 REKIEDAKES QRSGNVAELA LKATLVESST SGFTPSGGSS SVSMIASRKP bmy_07225T0/1-774 REKIEDAKES QHSGNVAELA LKATLVESST SGFTPSGGGS SVSMIACRKP BACU000320/1-971 REKIEDAKES QHSGNVAELA LKATLVRLVS F--------- ---------- 1001 1050 ENSTTRP00000011560/1-788 XXXXXXXNCV TDISHLVRKK RKPEEESPRK DDAKKAKQEP EVNGGSGDAV ENSP00000255120/1-788 TDGASSSNCV TDISHLVRKK RKPEEESPRK DDAKKAKQEP EVNGGSGDAV ENSBTAP00000020401/1-777 TDGASSSNCV TDISHLVRKK RKPEEESPRK DDAKKAKQEP EVNGGSGDTI bmy_07225T0/1-774 ADGASSSNCV TDISHLVRKK RKPEEESPRK DDAKKAKQEP EVNGGSGDAV BACU000320/1-971 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSTTRP00000011560/1-788 SSGTEVSENM EEEAENQAEC RAAVEGTVEA GATVESTAC ENSP00000255120/1-788 PSGNEVSENM EEEAENQAES RAAVEGTVEA GATVESTAC ENSBTAP00000020401/1-777 STGTEVAENM EEEAENKAES RAAVEGTVEA GATVESTAC bmy_07225T0/1-774 SSGTEVSENM EEEAENQAES RAAVEGTVEA GATVESTAC BACU000320/1-971 ---------- ---------- ---------- ---------