KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:31 2014 Check: 00 .. Name: ENSTTRP00000014707/1-517 Len: 539 Check: 5053 Weight: 1.00 Name: ENSP00000300055/1-522 Len: 539 Check: 7729 Weight: 1.00 Name: ENSBTAP00000020406/1-516 Len: 539 Check: 1722 Weight: 1.00 Name: bmy_15713T0/1-531 Len: 539 Check: 21 Weight: 1.00 Name: BACU016085/1-459 Len: 539 Check: 2120 Weight: 1.00 // 1 50 ENSTTRP00000014707/1-517 ---------- MAVNKG---- --PTLLDEDR PEQENVLQRV LQLPVVSSTC ENSP00000300055/1-522 ---------- MAVNKG---- --LTLLDGDL PEQENVLQRV LQLPVVSGTC ENSBTAP00000020406/1-516 ---------- MAVNKG---- --PTLLDGDL PEQENVLQRV LQLPVVSGTC bmy_15713T0/1-531 MGSMALGLPP QEVGGGGGMT SIPAFL--PL QEQENVLQRV LQLPVVSSTC BACU016085/1-459 ---------- MAVNKG---- --PTLLDEDH PEQENVLQRV LQLPVVSSTC 51 100 ENSTTRP00000014707/1-517 ECFQKTYTST KEAHPLVTSV CSAYEKGVQS ATSLAAWSME PVVRRLSTQF ENSP00000300055/1-522 ECFQKTYTST KEAHPLVASV CNAYEKGVQS ASSLAAWSME PVVRRLSTQF ENSBTAP00000020406/1-516 ECFQKTYAST KEAHPLVASV CNAYEKGVQG ASSLAAWSME PVVRRLSTQF bmy_15713T0/1-531 ECFQKTYTST KEAHPLVTSV CSAYEKGVQS ATSLAAWSME PVVRRLSTQF BACU016085/1-459 ECFQKTYTST KEAHPLVTSV CSAYEKGVQS ATSLAAWSME PVVRRLSTQF 101 150 ENSTTRP00000014707/1-517 IAANELACRG LNHLEEKIPA LQYPPEKIAS ELKDTISTRL RSARNSISVP ENSP00000300055/1-522 TAANELACRG LDHLEEKIPA LQYPPEKIAS ELKDTISTRL RSARNSISVP ENSBTAP00000020406/1-516 VAANELACRG LDHLEEKIPA LQYPPEKIAS ELKDTISTRL RSARNSISVP bmy_15713T0/1-531 IAANELACRG LDHLEEKIPA LQYPPEKIAS ELKDTISTRL RSARNSISVP BACU016085/1-459 IAANELACRG LDHLEEKIPA LQYPPEKIAS ELKNTISTRL RSARNSISVP 151 200 ENSTTRP00000014707/1-517 IASTSDKVLE AALAGCELAW GMVKDTAEFA ANTRAGQLAS GGADLALGGV ENSP00000300055/1-522 IASTSDKVLG AALAGCELAW GVARDTAEFA ANTRAGRLAS GGADLALGSI ENSBTAP00000020406/1-516 IASTSDKILG AALAGCELAW GMARDTAEYA ANTRAGRLAS GGADLALGGV bmy_15713T0/1-531 IASTSDKVLG AALAGCELAW GMVKDTAEFA ANTRAGQLAS GGADLALGGV BACU016085/1-459 IASTSDKVLG AALAGCELAW GMVKDTAEFA ANTRAGQLAS GGADLALGGV 201 250 ENSTTRP00000014707/1-517 EKVVEFLLPP TKEESAPAPG HQHAQKPPQA KPGLVSRVGA LANTLSQHTF ENSP00000300055/1-522 EKVVEYLLPP DKEESAPAPG HQQAQKSPKA KPSLLSRVGA LTNTLSRYTV ENSBTAP00000020406/1-516 EKMVEFLLPP ANEESAAAPG LQDAQKPPKA KPSLVSRVGA LANTLSRHTF bmy_15713T0/1-531 EKVVEFLLPP AKEESAPAPG HQHAQKPPQA KPDLVSRVGT LANTLSQHTF BACU016085/1-459 EKVVEFLLPP AKEES----G HQHAQKPPGA KPGLVSRVGT LANTLSQHTF 251 300 ENSTTRP00000014707/1-517 QTTARVLKQG QALAMWIPGV APLSSLAQWG ASAAIQVVSR RSSEVRVPWL ENSP00000300055/1-522 QTMARALEQG HTVAMWIPGV VPLSSLAQWG ASVAMQAVSR RRSEVRVPWL ENSBTAP00000020406/1-516 QTTARALKQG HALAMWIPGV APLSSLAQWG TSAAMQVVSR RRSEVRVPWL bmy_15713T0/1-531 QTTARALKQG QALAMWIPGV APLSSLAQWG ASAAIQVVSR RSSEVRVPWL BACU016085/1-459 QTTARALKQG QALAMWIPGV APLSSLAQWG ASAAIQVVSR RSSEVRVPWL 301 350 ENSTTRP00000014707/1-517 HNLTATREED HNDQMDTEGE ETEVEEEESE TEENKLSEXX XXXXXXXXXX ENSP00000300055/1-522 HSLAAAQEED HEDQTDTEGE DTE-EEEELE TEENKFSEVA ALPGPRGLLG ENSBTAP00000020406/1-516 HSLTATQEED HEEHTDTDGE ETG-EEEDSE TEESKLSEGA ALPGSQGLLG bmy_15713T0/1-531 HNLTATREED HNDQMDTEGE ETEVEEEESE TEENKLSEGA ALPGPQGLLG BACU016085/1-459 HNLTATREED HNDQMDTEGE ETEVEEEESE TEENKLSEGA ALPGPQGLLG 351 400 ENSTTRP00000014707/1-517 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000300055/1-522 GVAHTLQKTL QTTISAVTWA PAAVLGMAGR VLHLTPAPAV SSTKGRAMSL ENSBTAP00000020406/1-516 SVAHTLQKAL QSTVSVVMWA PAAVLGTAGR MLHLTPAQAT SSTKGRAMSL bmy_15713T0/1-531 GVAHTLQKAL QCTISVVTWA PAAVLGTAEW LLHLMPARAV SSTKGRAMSL BACU016085/1-459 SVAHTLQKAL QCTISVVTWA PAAVLGTAEW LLHLMPARAV SSTKGRAMSL 401 450 ENSTTRP00000014707/1-517 XXXXXXXXXX XXXXXXXXXX LPRLSLMEPE SEFREIENPP AEAESPEAER ENSP00000300055/1-522 SDALKGVTDN VVDTVVHYVP LPRLSLMEPE SEFRDIDNPP AEVERREAER ENSBTAP00000020406/1-516 SDALKGVTDN VVDTVVNYVP LPRLSLMEPE SEFRDIDNPP AEAERREAER bmy_15713T0/1-531 SDALKGVTDN VVDTVVHYVP LPRLSLMEPE SEFREIDNPP AEAESPEAER BACU016085/1-459 SDALKGVTDN VVDTVVHYVP LPRLSLMEPE SEFREIDNPP AEAESPEAER 451 500 ENSTTRP00000014707/1-517 RGSGALPAGS DTASRPAQSR GSLRSAR--- ---GPGAEDR VDTAAAPRTA ENSP00000300055/1-522 RASGAPSAGP EPAPRLAQPR RSLRSAQSPG APPGPGLEDE VATPAAPRPG ENSBTAP00000020406/1-516 RGSGAPPACP EPAPRPAPPR GSLRSAR--- ---GLGAEER VDATALPRAA bmy_15713T0/1-531 RGSGAPPAGS EPASRPAPSR GSLRSAR--- ---GPGAEDR VDTAAAPRTA BACU016085/1-459 RG-------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000014707/1-517 LPAMPREKPA RRVSDSFFRP SVMEPILGRT QYSQLRKKS ENSP00000300055/1-522 FPAVPREKPK RRVSDSFFRP SVMEPILGRT HYSQLRKKS ENSBTAP00000020406/1-516 FPAVPREKPT RRVSDSFFRP SVMEPILGRA QYSQLRKKS bmy_15713T0/1-531 LPAMPREKPA RRVSDSFFRP SVMEPILGRT QYSQLRKKS BACU016085/1-459 ---------- --VSDSFFRP SVMEPILGRT QYSQLRKKS