KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:11:34 2014 Check: 00 .. Name: ENSBTAP00000020429/1-447 Len: 473 Check: 9976 Weight: 1.00 Name: ENSTTRP00000006624/1-447 Len: 473 Check: 63 Weight: 1.00 Name: bmy_11128T0/1-434 Len: 473 Check: 4871 Weight: 1.00 Name: BACU007241/1-408 Len: 473 Check: 635 Weight: 1.00 // 1 50 ENSBTAP00000020429/1-447 MSLVDLGKRL LEAARKGQDD EVRTLMANGA PFTTDW---- ---------- ENSTTRP00000006624/1-447 MSLVDLGKRL LEAARKGQDD EVRTLMANGA PFTTDW---- ---------- bmy_11128T0/1-434 MSLVDLGKRL LEAARKGQDD EVRTLMANGA PFTTDWFSKL KRISCGYMGA BACU007241/1-408 MSLVDLGKRL LEAARKGQDD EVRTLMANGA PFTTDW---- ---------- 51 100 ENSBTAP00000020429/1-447 ---------- --LGTSPLHL AAQYGHYSTA EVLLRAGVSR DARTKVDRTP ENSTTRP00000006624/1-447 ---------- --LGTSPLHL AAQYGHYSTA EVLLRAGVSR DARTKVDRTP bmy_11128T0/1-434 LFKIIPFMEF YLLGTSPLHL AAQYGHYSTA EVLLRAGVSR DARTKVDRTP BACU007241/1-408 ---------- --LGTSPLHL AAQYGHYSTA EVLLRAGVSR DARTKVDRTP 101 150 ENSBTAP00000020429/1-447 LHMAAADGHA HIVELLVRNG ADVNAKDMLK MTALHWATEH HHRDVVELLI ENSTTRP00000006624/1-447 LHMAAADGHA HIVELLVRNG ADVNAKDMLK MTALHWATEH HHRDVVELLI bmy_11128T0/1-434 LHMAAADGHA HIVELLVRNG ADVNAKDMLK MTALHWATEH HHRDVVELLI BACU007241/1-408 LHMAAADGHA HIVELLVRNG ADVNAKDMLK MTALHWATEH HHRDVVELLI 151 200 ENSBTAP00000020429/1-447 KYGADVHAFS KFDKSAFDIA LEKNNAEILV ILQEAMQNQV NANPERANPV ENSTTRP00000006624/1-447 KYGADVHAFS KFDKSAFDIA LEKNNAEILV ILQEAMQNQV NANPERANPV bmy_11128T0/1-434 KYGADVHAFS KFDKSAFDIA LEKNNAEILV ILQEAMQNQV NANPERANPV BACU007241/1-408 KYGADVHAFS KFDKSAFDIA LEKNNAEILV ILQEAMQNQV NANPERANPV 201 250 ENSBTAP00000020429/1-447 TMATPFIFTS GEVVNLASLV SSASTKTTSG DPHASSTVHF SNSTTSVLAT ENSTTRP00000006624/1-447 TMGTPFIFTS GEVVNLASLV SSASTKTTSG DPHASSTVHF SNSTTSVLAT bmy_11128T0/1-434 TMGTPFIFTS GEVVNLASLV SSASTKTTS- ---------- ---------- BACU007241/1-408 TMGTPFIFTS GEVVNLASLV SSASTKTTS- ---------- ---------- 251 300 ENSBTAP00000020429/1-447 LAALAEASAP LSNSHRATAN SEEIIEGNSV DSSIQQVVGS GGQRVITIVT ENSTTRP00000006624/1-447 LAALAEASAP LCNSHRATAN SEEIIEGNSV DSSIQQVVGS GGQRVITIVT bmy_11128T0/1-434 ---------- --------AN SEEIIEGNSV DSSIQQVVGS GGQRVITIVT BACU007241/1-408 ---------- --------AN SEEIIEGNSV DSSIQQVVGS GGQRVITIVT 301 350 ENSBTAP00000020429/1-447 DGIPLGNIQT AIPAGGIGQP FIVTVQDGQQ VLTVPAGQVA EETVIEEEAE ENSTTRP00000006624/1-447 DGVPLGNIQT AIPTGGIGQP FIVTMQDGQQ VLTVPAGQVA EETVIEEEAE bmy_11128T0/1-434 DGVPLGNIQT AIPTGGIGQP FIVTMQDGQQ VLTVPAGQVA EETVIEEEAE BACU007241/1-408 DGVPLGNIQT AIPTGGIGQP FIVTMQDGQQ VLTVPAGQVA EETVIEEEAE 351 400 ENSBTAP00000020429/1-447 EAEKLPLTKK PRIEEMTNSV EESKEGTERE LLQQRLQEAN RRAQEYRHQL ENSTTRP00000006624/1-447 EAEKLPLTKK PRIEEMTDSV EESKEGTERE LLQQQLQEAN RRAQEYRHQL bmy_11128T0/1-434 EAEKLPLTKK PRIEEMTNSV EESKEGTERE LLQQQLQEAN RRAQEYRHQL BACU007241/1-408 EAEKLPLTKK PRIEEMTNSV EESKEGTERE LLQQQLQEAN RRAQEYRHQL 401 450 ENSBTAP00000020429/1-447 LKKEQEAEQY RLRLEAMARQ QPNGVDFAMV EEVAEVDAVV VTEREMEERE ENSTTRP00000006624/1-447 LKKEQEAEQY RLKLEAMARQ QPNGVDFTMV EEVAEVDAVV VTEGEMEERE bmy_11128T0/1-434 LKKEQEAEQY RLKLEAMARQ QPNGVDFTMV EEVAEVDAVV VTEGEMEERE BACU007241/1-408 LKKEQEAEQY RLKLEAMARQ QPNGVDFTMV EEVAEVDAVV VTEGEMEERE 451 500 ENSBTAP00000020429/1-447 TEVTGAVGTA EPHTGVSMET VST ENSTTRP00000006624/1-447 TEVTGAVGTT EPHTGVSMET VST bmy_11128T0/1-434 TEVTGAVGTT EPHTGVSMET VST BACU007241/1-408 TEMTGAVGTT EPHTGVSMET VST