KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:11:35 2014 Check: 00 ..
Name: ENSP00000217173/1-541 Len: 541 Check: 449 Weight: 1.00
Name: ENSBTAP00000020438/1-509 Len: 541 Check: 3125 Weight: 1.00
Name: ENSTTRP00000008859/1-537 Len: 541 Check: 5293 Weight: 1.00
Name: bmy_07666T0/1-537 Len: 541 Check: 4353 Weight: 1.00
Name: BACU019564/1-537 Len: 541 Check: 4858 Weight: 1.00
//
1 50
ENSP00000217173/1-541 MVINLCLPQF RPRIHCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP
ENSBTAP00000020438/1-509 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP
ENSTTRP00000008859/1-537 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP
bmy_07666T0/1-537 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP
BACU019564/1-537 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP
51 100
ENSP00000217173/1-541 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSASSS RVSWNTPQCR
ENSBTAP00000020438/1-509 VYVTVSFPFS VEICRINIDL SAGGGQNVTG LEMYTSALSR GASWNTPECR
ENSTTRP00000008859/1-537 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSALSS RVSWNTPECQ
bmy_07666T0/1-537 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSALSS RVSWNTPECQ
BACU019564/1-537 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSALSS RVSWNTPECQ
101 150
ENSP00000217173/1-541 TLGPAEPSVP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGAMEATLP
ENSBTAP00000020438/1-509 TPDPDEPSIP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPVEATLP
ENSTTRP00000008859/1-537 TPGPDEPSIP EKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPMEATLP
bmy_07666T0/1-537 TPGPDEPSIP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPMEATLP
BACU019564/1-537 TPGPDEPSIP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPMEATLP
151 200
ENSP00000217173/1-541 SPAVVAQELW NKGALSLSHV AHLRICITHV TGGGIPCIKR LEVWGQPAKT
ENSBTAP00000020438/1-509 SPAVVAQELW NKGALSLSHV AHLKICITHV TGGGVPCIKR LEVWGQPAKT
ENSTTRP00000008859/1-537 SPAVVAQELW NKGALSLSHV AHLKICITHV TGSGIPCIKR LEVWGQPAKT
bmy_07666T0/1-537 SPAVVAQELW NKGALSLSHV AHLKICITHV TGSGIPCIKR LEVWGQPAKT
BACU019564/1-537 SPAVVAQELW NKGALSLSHV AHLKICITHV TGSGIPCIKR LEVWGQPAKT
201 250
ENSP00000217173/1-541 CSQEVIDSIL LVTSENLPQD VALQAPALPM ESDCDPGDQP ESQQAPSSLQ
ENSBTAP00000020438/1-509 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDSGGQS EGQQAPSSLQ
ENSTTRP00000008859/1-537 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDPGGQS EGQQAPSSLL
bmy_07666T0/1-537 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDPGGQS EGQQAPSSLL
BACU019564/1-537 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDPGGQS EGQQAPSSLL
251 300
ENSP00000217173/1-541 KLAEIIQDVP EEFLDPITLE IMPCPMLLPS GKVIDQSTLE KCNRSEATWG
ENSBTAP00000020438/1-509 ELAEVIRDIP EEFLDPITLE IMPFPMLLPS GKVIDQSTLE KCNRSEATWG
ENSTTRP00000008859/1-537 ELAEVIRDVP EEFLDPITLE IMPYPMLLPS GKVIDQSTLE KCNRSEATWG
bmy_07666T0/1-537 ELAEVIQDVP EEFLDPITLE IMPYPMLLPS GKVIDQSTLE KCNRSEATWG
BACU019564/1-537 ELAEVIRDVP EEFLDPITLE IMPYPMLLPS GKVIDQSTLE KCNRSEATWG
301 350
ENSP00000217173/1-541 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL
ENSBTAP00000020438/1-509 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL
ENSTTRP00000008859/1-537 RVPSDPFTGV AFTPHSQPLP HPYLKARIDH FLLQHSIPGC HLLGRAQTAL
bmy_07666T0/1-537 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL
BACU019564/1-537 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL
351 400
ENSP00000217173/1-541 AVIPSSIVLP SQKRKIEQAE HVPDSNFGVN ASCFSATSPL VLPTTSEHTA
ENSBTAP00000020438/1-509 AVTPSSIALP SRKRKMEQAE HGPDSSLGLN ASCFSTTSLL VSPSTSEHTA
ENSTTRP00000008859/1-537 AVTPSSIALP SQKRKMEQGE HAPDSSLGLN ASCFSTTSLL VSPTTSEHTA
bmy_07666T0/1-537 AVTPSSIALP SQKRKMEQGE HAPDSSLGLN ASCFSTTSLL VSPTTSEHTA
BACU019564/1-537 AVTPSSIALP SQKRKMEQGE HAPDSSLGLN ASCFSTTSLL VSPTTSEHTA
401 450
ENSP00000217173/1-541 KKMKATNEPS LTHMDCSTGP LSHEQKLSQS LEIALASTLG SMPSFTARLT
ENSBTAP00000020438/1-509 KKMKAANE-- --LMDCS--- ---------- ---------- -----TARLT
ENSTTRP00000008859/1-537 KKMKAASE-- --LMDCSTGP VSHEQKLSQS LEIALTSTLG SMPSFTARLT
bmy_07666T0/1-537 KKMKAASE-- --LMDCSTGP VSHEQKLSQS LEIALTSTLG SMPSFTARLT
BACU019564/1-537 KKMKAASE-- --LMDCSTGP VSHEQKLSQS LEIALTSTLG SMPSFTARLT
451 500
ENSP00000217173/1-541 RGQLQHLGTR GSNTSWRPGT GSEQPGSILG PECASCKRVF SPYFKKEPVY
ENSBTAP00000020438/1-509 RGQLQHLSTR GSSTSWRPST SSEQSGSSLG PECTSCKRVF SPYFKRESAY
ENSTTRP00000008859/1-537 RGQLQHLSTR GSNTSWRPGS SSEQPGSILG PECTSCKRVF SPYFKKEPVY
bmy_07666T0/1-537 RGQLQHLSTR GSSASWRPGS SSEQPGSILG PECTSCKRVF TPYFKKEPIY
BACU019564/1-537 RGQLQHLSTR GSSASWRPGS SSEQPGSILG PECTSCKRVF SPYFKKEPVY
501 550
ENSP00000217173/1-541 QLPCGHLLCR PCLGEKQRSL PMTCTACQRP VASQDVLRVH F
ENSBTAP00000020438/1-509 QLPCGHLLCR PCLTEKQRSP AMTCTACQQP FASQDILRVH F
ENSTTRP00000008859/1-537 QLPCGHLLCR PCLGEKQRSL PMTCIACQRP FASQDVLRVH F
bmy_07666T0/1-537 QLPCGHLLCR PCLGEKQRSL PMTCIACQQP FANQDVLRVH F
BACU019564/1-537 QLPCGHLLCR PCLGEKQRSL PMTCIACQQP FANQDVLRVH F