KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:11:35 2014 Check: 00 .. Name: ENSP00000217173/1-541 Len: 541 Check: 449 Weight: 1.00 Name: ENSBTAP00000020438/1-509 Len: 541 Check: 3125 Weight: 1.00 Name: ENSTTRP00000008859/1-537 Len: 541 Check: 5293 Weight: 1.00 Name: bmy_07666T0/1-537 Len: 541 Check: 4353 Weight: 1.00 Name: BACU019564/1-537 Len: 541 Check: 4858 Weight: 1.00 // 1 50 ENSP00000217173/1-541 MVINLCLPQF RPRIHCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP ENSBTAP00000020438/1-509 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP ENSTTRP00000008859/1-537 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP bmy_07666T0/1-537 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP BACU019564/1-537 MVINLCLPQF RPRIYCNKIS ADGYEVENLI SEDLTKRSHG FRTEYFIKPP 51 100 ENSP00000217173/1-541 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSASSS RVSWNTPQCR ENSBTAP00000020438/1-509 VYVTVSFPFS VEICRINIDL SAGGGQNVTG LEMYTSALSR GASWNTPECR ENSTTRP00000008859/1-537 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSALSS RVSWNTPECQ bmy_07666T0/1-537 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSALSS RVSWNTPECQ BACU019564/1-537 VYVTVSFPFN VEICRINIDL TAGGGQNVTG LEMYTSALSS RVSWNTPECQ 101 150 ENSP00000217173/1-541 TLGPAEPSVP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGAMEATLP ENSBTAP00000020438/1-509 TPDPDEPSIP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPVEATLP ENSTTRP00000008859/1-537 TPGPDEPSIP EKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPMEATLP bmy_07666T0/1-537 TPGPDEPSIP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPMEATLP BACU019564/1-537 TPGPDEPSIP DKEAFTLVGK VLLKNQSQVV FSHRGFKARP PFGPMEATLP 151 200 ENSP00000217173/1-541 SPAVVAQELW NKGALSLSHV AHLRICITHV TGGGIPCIKR LEVWGQPAKT ENSBTAP00000020438/1-509 SPAVVAQELW NKGALSLSHV AHLKICITHV TGGGVPCIKR LEVWGQPAKT ENSTTRP00000008859/1-537 SPAVVAQELW NKGALSLSHV AHLKICITHV TGSGIPCIKR LEVWGQPAKT bmy_07666T0/1-537 SPAVVAQELW NKGALSLSHV AHLKICITHV TGSGIPCIKR LEVWGQPAKT BACU019564/1-537 SPAVVAQELW NKGALSLSHV AHLKICITHV TGSGIPCIKR LEVWGQPAKT 201 250 ENSP00000217173/1-541 CSQEVIDSIL LVTSENLPQD VALQAPALPM ESDCDPGDQP ESQQAPSSLQ ENSBTAP00000020438/1-509 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDSGGQS EGQQAPSSLQ ENSTTRP00000008859/1-537 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDPGGQS EGQQAPSSLL bmy_07666T0/1-537 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDPGGQS EGQQAPSSLL BACU019564/1-537 CSQEVIDSVL LVASESLPQD LSLQAPALPM ESDCDPGGQS EGQQAPSSLL 251 300 ENSP00000217173/1-541 KLAEIIQDVP EEFLDPITLE IMPCPMLLPS GKVIDQSTLE KCNRSEATWG ENSBTAP00000020438/1-509 ELAEVIRDIP EEFLDPITLE IMPFPMLLPS GKVIDQSTLE KCNRSEATWG ENSTTRP00000008859/1-537 ELAEVIRDVP EEFLDPITLE IMPYPMLLPS GKVIDQSTLE KCNRSEATWG bmy_07666T0/1-537 ELAEVIQDVP EEFLDPITLE IMPYPMLLPS GKVIDQSTLE KCNRSEATWG BACU019564/1-537 ELAEVIRDVP EEFLDPITLE IMPYPMLLPS GKVIDQSTLE KCNRSEATWG 301 350 ENSP00000217173/1-541 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL ENSBTAP00000020438/1-509 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL ENSTTRP00000008859/1-537 RVPSDPFTGV AFTPHSQPLP HPYLKARIDH FLLQHSIPGC HLLGRAQTAL bmy_07666T0/1-537 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL BACU019564/1-537 RVPSDPFTGV AFTPHSQPLP HPSLKARIDH FLLQHSIPGC HLLGRAQTAL 351 400 ENSP00000217173/1-541 AVIPSSIVLP SQKRKIEQAE HVPDSNFGVN ASCFSATSPL VLPTTSEHTA ENSBTAP00000020438/1-509 AVTPSSIALP SRKRKMEQAE HGPDSSLGLN ASCFSTTSLL VSPSTSEHTA ENSTTRP00000008859/1-537 AVTPSSIALP SQKRKMEQGE HAPDSSLGLN ASCFSTTSLL VSPTTSEHTA bmy_07666T0/1-537 AVTPSSIALP SQKRKMEQGE HAPDSSLGLN ASCFSTTSLL VSPTTSEHTA BACU019564/1-537 AVTPSSIALP SQKRKMEQGE HAPDSSLGLN ASCFSTTSLL VSPTTSEHTA 401 450 ENSP00000217173/1-541 KKMKATNEPS LTHMDCSTGP LSHEQKLSQS LEIALASTLG SMPSFTARLT ENSBTAP00000020438/1-509 KKMKAANE-- --LMDCS--- ---------- ---------- -----TARLT ENSTTRP00000008859/1-537 KKMKAASE-- --LMDCSTGP VSHEQKLSQS LEIALTSTLG SMPSFTARLT bmy_07666T0/1-537 KKMKAASE-- --LMDCSTGP VSHEQKLSQS LEIALTSTLG SMPSFTARLT BACU019564/1-537 KKMKAASE-- --LMDCSTGP VSHEQKLSQS LEIALTSTLG SMPSFTARLT 451 500 ENSP00000217173/1-541 RGQLQHLGTR GSNTSWRPGT GSEQPGSILG PECASCKRVF SPYFKKEPVY ENSBTAP00000020438/1-509 RGQLQHLSTR GSSTSWRPST SSEQSGSSLG PECTSCKRVF SPYFKRESAY ENSTTRP00000008859/1-537 RGQLQHLSTR GSNTSWRPGS SSEQPGSILG PECTSCKRVF SPYFKKEPVY bmy_07666T0/1-537 RGQLQHLSTR GSSASWRPGS SSEQPGSILG PECTSCKRVF TPYFKKEPIY BACU019564/1-537 RGQLQHLSTR GSSASWRPGS SSEQPGSILG PECTSCKRVF SPYFKKEPVY 501 550 ENSP00000217173/1-541 QLPCGHLLCR PCLGEKQRSL PMTCTACQRP VASQDVLRVH F ENSBTAP00000020438/1-509 QLPCGHLLCR PCLTEKQRSP AMTCTACQQP FASQDILRVH F ENSTTRP00000008859/1-537 QLPCGHLLCR PCLGEKQRSL PMTCIACQRP FASQDVLRVH F bmy_07666T0/1-537 QLPCGHLLCR PCLGEKQRSL PMTCIACQQP FANQDVLRVH F BACU019564/1-537 QLPCGHLLCR PCLGEKQRSL PMTCIACQQP FANQDVLRVH F